RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 TLX1NBP0CAT3 122 aa4.96□□□□□ -1.62
EPHA3-201ENST00000336596 PSORS1C2Q9UIG4 136 aa4.96□□□□□ -1.62
EPHA3-201ENST00000336596 LINC00528Q8N1L1 170 aa4.95□□□□□ -1.62
EPHA3-201ENST00000336596 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
EPHA3-201ENST00000336596 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
EPHA3-201ENST00000336596 LINC00310P59036 64 aa4.95□□□□□ -1.62
EPHA3-201ENST00000336596 DNAH14Q0VDD8 3507 aa4.95□□□□□ -1.62
EPHA3-201ENST00000336596 LINC00612Q8N6U2 182 aa4.95□□□□□ -1.62
EPHA3-201ENST00000336596 KIAA0087Q14695 138 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 Q96NJ1 140 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 DMXL2Q8TDJ6 3036 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 A0A087WYN8 130 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 TRAV22A0A0B4J277 110 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
EPHA3-201ENST00000336596 CSNK1G2-AS1Q8NCQ2 148 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 KRTAP21-3Q3LHN1 58 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 CASC10Q5T4H9 136 aa4.94□□□□□ -1.62
EPHA3-201ENST00000336596 LOC101927531A0A1B0GV80 90 aa4.93□□□□□ -1.62
EPHA3-201ENST00000336596 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
EPHA3-201ENST00000336596 CELSR3Q9NYQ7 3312 aa4.93□□□□□ -1.62
EPHA3-201ENST00000336596 FRYQ5TBA9 3013 aa4.93□□□□□ -1.62
EPHA3-201ENST00000336596 A6NED7 52 aa4.93□□□□□ -1.62
EPHA3-201ENST00000336596 SPINK1P00995 79 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 A0A096LNJ9 63 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 MT-ATP8P03928 68 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 WIPF1O43516 503 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 IGLV7-43P04211 117 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 MAP1AP78559 2803 aaPredicted RBP4.92□□□□□ -1.62
EPHA3-201ENST00000336596 TRBV7-4A0A0J9YYF1 115 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 FLNCQ14315 2725 aa4.92□□□□□ -1.62
EPHA3-201ENST00000336596 ST20-AS1Q8NBB2 130 aa4.91□□□□□ -1.62
EPHA3-201ENST00000336596 DMXL1Q9Y485 3027 aa4.91□□□□□ -1.62
EPHA3-201ENST00000336596 Q9UF83 564 aa4.91□□□□□ -1.62
EPHA3-201ENST00000336596 COX7CP15954 63 aa4.9□□□□□ -1.62
EPHA3-201ENST00000336596 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.62
EPHA3-201ENST00000336596 LOC110117498A0A087WWA1 95 aa4.9□□□□□ -1.62
EPHA3-201ENST00000336596 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.62
EPHA3-201ENST00000336596 SVIPQ8NHG7 77 aa4.9□□□□□ -1.62
EPHA3-201ENST00000336596 PRR34Q9NV39 138 aa4.9□□□□□ -1.63
EPHA3-201ENST00000336596 TRBV7-7A0A0K0K1E9 115 aa4.9□□□□□ -1.63
EPHA3-201ENST00000336596 CHTF8P0CG12 524 aa4.89□□□□□ -1.63
EPHA3-201ENST00000336596 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-201ENST00000336596 CD164Q04900 197 aa4.89□□□□□ -1.63
EPHA3-201ENST00000336596 C2orf91Q6ZV80 131 aa4.89□□□□□ -1.63
EPHA3-201ENST00000336596 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
EPHA3-201ENST00000336596 KCNQ1DNQ9H478 68 aa4.89□□□□□ -1.63
EPHA3-201ENST00000336596 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
EPHA3-201ENST00000336596 ADAMTSL4-AS1Q5T5F5 129 aa4.88□□□□□ -1.63
EPHA3-201ENST00000336596 ATMQ13315 3056 aa4.87□□□□□ -1.63
EPHA3-201ENST00000336596 LCE6AA0A183 80 aa4.87□□□□□ -1.63
EPHA3-201ENST00000336596 A8MWP4 228 aa4.87□□□□□ -1.63
EPHA3-201ENST00000336596 FAM229BQ4G0N7 80 aa4.87□□□□□ -1.63
EPHA3-201ENST00000336596 TEX15Q9BXT5 2789 aa4.87□□□□□ -1.63
EPHA3-201ENST00000336596 PCOTHQ58A44 107 aa4.87□□□□□ -1.63
EPHA3-201ENST00000336596 GCN1Q92616 2671 aaKnown RBP4.86□□□□□ -1.63
EPHA3-201ENST00000336596 TMEM254Q8TBM7 123 aa4.86□□□□□ -1.63
EPHA3-201ENST00000336596 VPREB1P12018 145 aa4.86□□□□□ -1.63
EPHA3-201ENST00000336596 Q8N3U1 123 aa4.86□□□□□ -1.63
EPHA3-201ENST00000336596 COL6A5A8TX70 2615 aa4.86□□□□□ -1.63
EPHA3-201ENST00000336596 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
EPHA3-201ENST00000336596 SETXQ7Z333 2677 aaKnown RBP4.86□□□□□ -1.63
EPHA3-201ENST00000336596 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 IGLV6-57P01721 117 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 OXTP01178 125 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 SNURFQ9Y675 71 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 FREM2Q5SZK8 3169 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 COL12A1Q99715 3063 aa4.85□□□□□ -1.63
EPHA3-201ENST00000336596 A0A1B0GU69 56 aa4.84□□□□□ -1.63
EPHA3-201ENST00000336596 IGLV5-37A0A075B6J1 123 aa4.84□□□□□ -1.64
EPHA3-201ENST00000336596 STAB1Q9NY15 2570 aa4.84□□□□□ -1.64
EPHA3-201ENST00000336596 Q6ZSA8 131 aa4.83□□□□□ -1.64
EPHA3-201ENST00000336596 C15orf56Q8N910 161 aa4.82□□□□□ -1.64
EPHA3-201ENST00000336596 SMR3BP02814 79 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-201ENST00000336596 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
EPHA3-201ENST00000336596 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
EPHA3-201ENST00000336596 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
EPHA3-201ENST00000336596 SPRR4Q96PI1 79 aa4.8□□□□□ -1.64
EPHA3-201ENST00000336596 ADGRG4Q8IZF6 3080 aa4.8□□□□□ -1.64
EPHA3-201ENST00000336596 SPEGQ15772 3267 aa4.8□□□□□ -1.64
EPHA3-201ENST00000336596 A0A1B0GVX0 72 aa4.79□□□□□ -1.64
EPHA3-201ENST00000336596 Q6ZQT0 140 aa4.79□□□□□ -1.64
EPHA3-201ENST00000336596 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
EPHA3-201ENST00000336596 USP34Q70CQ2 3546 aa4.79□□□□□ -1.64
EPHA3-201ENST00000336596 ITPR2Q14571 2701 aa4.79□□□□□ -1.64
EPHA3-201ENST00000336596 KALRNO60229 2985 aa4.78□□□□□ -1.64
EPHA3-201ENST00000336596 SERTAD4-AS1Q5TG53 156 aa4.78□□□□□ -1.64
EPHA3-201ENST00000336596 NBEAQ8NFP9 2946 aa4.77□□□□□ -1.65
EPHA3-201ENST00000336596 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
EPHA3-201ENST00000336596 UTP20O75691 2785 aaKnown RBP4.77□□□□□ -1.65
EPHA3-201ENST00000336596 HRES1P13985 223 aa4.76□□□□□ -1.65
EPHA3-201ENST00000336596 TNP2Q05952 138 aa4.76□□□□□ -1.65
EPHA3-201ENST00000336596 FAM168BA1KXE4 195 aa4.75□□□□□ -1.65
EPHA3-201ENST00000336596 M0R2T5 61 aa4.75□□□□□ -1.65
EPHA3-201ENST00000336596 OBSCN-AS1Q96MR7 158 aa4.75□□□□□ -1.65
EPHA3-201ENST00000336596 PLAC8Q9NZF1 115 aa4.75□□□□□ -1.65
EPHA3-201ENST00000336596 ITPR1Q14643 2758 aa4.75□□□□□ -1.65
EPHA3-201ENST00000336596 LRBAP50851 2863 aa4.75□□□□□ -1.65
EPHA3-201ENST00000336596 UBR5O95071 2799 aaPredicted RBP4.75□□□□□ -1.65
EPHA3-201ENST00000336596 ERC2-IT1O76042 136 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms