RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 IGLV8-61A0A075B6I0 122 aa5.3□□□□□ -1.56
TDP1-201ENST00000335725 A8MUU9 505 aa5.3□□□□□ -1.56
TDP1-201ENST00000335725 CACNA1HO95180 2353 aa5.3□□□□□ -1.56
TDP1-201ENST00000335725 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
TDP1-201ENST00000335725 CDK2AP2O75956 126 aa5.29□□□□□ -1.56
TDP1-201ENST00000335725 MYO15AQ9UKN7 3530 aa5.29□□□□□ -1.56
TDP1-201ENST00000335725 CELSR3Q9NYQ7 3312 aa5.29□□□□□ -1.56
TDP1-201ENST00000335725 C20orf166-AS1Q96NR2 134 aa5.28□□□□□ -1.56
TDP1-201ENST00000335725 LINC00472Q9H8W2 130 aa5.28□□□□□ -1.56
TDP1-201ENST00000335725 A0A096LPF7 62 aa5.28□□□□□ -1.56
TDP1-201ENST00000335725 DEFB130BP0DP73 79 aa5.28□□□□□ -1.56
TDP1-201ENST00000335725 DEFB130AP0DP74 79 aa5.28□□□□□ -1.56
TDP1-201ENST00000335725 C10orf99Q6UWK7 81 aa5.27□□□□□ -1.57
TDP1-201ENST00000335725 SPRR1AP35321 89 aa5.27□□□□□ -1.57
TDP1-201ENST00000335725 ANKRD17O75179 2603 aaKnown RBP5.27□□□□□ -1.57
TDP1-201ENST00000335725 DEFB113Q30KQ7 82 aa5.27□□□□□ -1.57
TDP1-201ENST00000335725 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
TDP1-201ENST00000335725 K7ERS5 55 aa5.26□□□□□ -1.57
TDP1-201ENST00000335725 PRRC2CQ9Y520 2896 aaKnown RBP5.26□□□□□ -1.57
TDP1-201ENST00000335725 DMXL2Q8TDJ6 3036 aa5.26□□□□□ -1.57
TDP1-201ENST00000335725 IGLV7-43P04211 117 aa5.25□□□□□ -1.57
TDP1-201ENST00000335725 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
TDP1-201ENST00000335725 TACC2O95359 2948 aa5.25□□□□□ -1.57
TDP1-201ENST00000335725 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
TDP1-201ENST00000335725 NUPR2A6NF83 97 aa5.25□□□□□ -1.57
TDP1-201ENST00000335725 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
TDP1-201ENST00000335725 SPENQ96T58 3664 aaKnown RBP5.25□□□□□ -1.57
TDP1-201ENST00000335725 CSMD1Q96PZ7 3565 aa5.24□□□□□ -1.57
TDP1-201ENST00000335725 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
TDP1-201ENST00000335725 CUL9Q8IWT3 2517 aa5.24□□□□□ -1.57
TDP1-201ENST00000335725 CASC10Q5T4H9 136 aa5.23□□□□□ -1.57
TDP1-201ENST00000335725 SPINT4Q6UDR6 99 aa5.23□□□□□ -1.57
TDP1-201ENST00000335725 NCOR1O75376 2440 aa5.23□□□□□ -1.57
TDP1-201ENST00000335725 DNAH10OSP0CZ25 163 aa5.23□□□□□ -1.57
TDP1-201ENST00000335725 PLA2G2CQ5R387 149 aa5.23□□□□□ -1.57
TDP1-201ENST00000335725 LELP1Q5T871 98 aa5.22□□□□□ -1.57
TDP1-201ENST00000335725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.22□□□□□ -1.572e-9■■■■■ 31.2
TDP1-201ENST00000335725 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
TDP1-201ENST00000335725 CREBBPQ92793 2442 aa5.22□□□□□ -1.57
TDP1-201ENST00000335725 C8orf17Q9NRJ1 99 aa5.21□□□□□ -1.57
TDP1-201ENST00000335725 GIG44P09565 113 aaPredicted RBP5.21□□□□□ -1.58
TDP1-201ENST00000335725 CHTF8P0CG12 524 aa5.21□□□□□ -1.58
TDP1-201ENST00000335725 A0A0G2JQZ4 141 aa5.21□□□□□ -1.58
TDP1-201ENST00000335725 A0A1W2PNN7 141 aa5.21□□□□□ -1.58
TDP1-201ENST00000335725 ACACAQ13085 2346 aa5.2□□□□□ -1.58
TDP1-201ENST00000335725 C4orf3Q8WVX3 66 aa5.2□□□□□ -1.58
TDP1-201ENST00000335725 CCL19Q99731 98 aa5.2□□□□□ -1.58
TDP1-201ENST00000335725 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
TDP1-201ENST00000335725 LINC00304Q8N9R0 145 aa5.19□□□□□ -1.58
TDP1-201ENST00000335725 KRTAP26-1Q6PEX3 210 aa5.18□□□□□ -1.58
TDP1-201ENST00000335725 ZDBF2Q9HCK1 2354 aa5.18□□□□□ -1.58
TDP1-201ENST00000335725 TLX1NBP0CAT3 122 aa5.17□□□□□ -1.58
TDP1-201ENST00000335725 Q5W150 140 aa5.17□□□□□ -1.58
TDP1-201ENST00000335725 EP300Q09472 2414 aaPredicted RBP5.17□□□□□ -1.58
TDP1-201ENST00000335725 ZFHX4Q86UP3 3567 aa5.16□□□□□ -1.58
TDP1-201ENST00000335725 IGLV9-49A0A0B4J1Y8 123 aa5.16□□□□□ -1.58
TDP1-201ENST00000335725 SMG1Q96Q15 3661 aaKnown RBP5.15□□□□□ -1.58
TDP1-201ENST00000335725 SPTA1P02549 2419 aa5.15□□□□□ -1.58
TDP1-201ENST00000335725 GVINP1Q7Z2Y8 2422 aa5.15□□□□□ -1.59
TDP1-201ENST00000335725 AKAP13Q12802 2813 aa5.14□□□□□ -1.59
TDP1-201ENST00000335725 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
TDP1-201ENST00000335725 C15orf56Q8N910 161 aa5.14□□□□□ -1.59
TDP1-201ENST00000335725 LOC400499M0QZD8 3231 aa5.13□□□□□ -1.59
TDP1-201ENST00000335725 PIEZO2Q9H5I5 2752 aa5.13□□□□□ -1.59
TDP1-201ENST00000335725 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
TDP1-201ENST00000335725 TTC28Q96AY4 2481 aa5.12□□□□□ -1.59
TDP1-201ENST00000335725 LY6G6CO95867 125 aa5.11□□□□□ -1.59
TDP1-201ENST00000335725 DEFB124Q8NES8 71 aa5.11□□□□□ -1.59
TDP1-201ENST00000335725 NOTCH3Q9UM47 2321 aa5.11□□□□□ -1.59
TDP1-201ENST00000335725 A0A087WTM6 91 aa5.11□□□□□ -1.59
TDP1-201ENST00000335725 ANKHD1Q8IWZ3 2542 aaKnown RBP5.11□□□□□ -1.59
TDP1-201ENST00000335725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
TDP1-201ENST00000335725 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
TDP1-201ENST00000335725 J3QL48 77 aa5.09□□□□□ -1.59
TDP1-201ENST00000335725 SPRR1BP22528 89 aa5.09□□□□□ -1.59
TDP1-201ENST00000335725 ALMS1Q8TCU4 4167 aa5.09□□□□□ -1.59
TDP1-201ENST00000335725 CHD6Q8TD26 2715 aa5.09□□□□□ -1.59
TDP1-201ENST00000335725 BOD1L1Q8NFC6 3051 aa5.09□□□□□ -1.6
TDP1-201ENST00000335725 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
TDP1-201ENST00000335725 SPG11Q96JI7 2443 aa5.08□□□□□ -1.6
TDP1-201ENST00000335725 COL12A1Q99715 3063 aa5.08□□□□□ -1.6
TDP1-201ENST00000335725 DMXL1Q9Y485 3027 aa5.07□□□□□ -1.6
TDP1-201ENST00000335725 SPTAN1Q13813 2472 aaKnown RBP5.07□□□□□ -1.6
TDP1-201ENST00000335725 MAP1AP78559 2803 aaPredicted RBP5.07□□□□□ -1.6
TDP1-201ENST00000335725 BDP1A6H8Y1 2624 aa5.07□□□□□ -1.6
TDP1-201ENST00000335725 ITPR1Q14643 2758 aa5.07□□□□□ -1.6
TDP1-201ENST00000335725 OTOGLQ3ZCN5 2332 aa5.07□□□□□ -1.6
TDP1-201ENST00000335725 IGF2RP11717 2491 aa5.06□□□□□ -1.6
TDP1-201ENST00000335725 Q96NJ1 140 aa5.05□□□□□ -1.6
TDP1-201ENST00000335725 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
TDP1-201ENST00000335725 PANO1I0J062 215 aa5.04□□□□□ -1.6
TDP1-201ENST00000335725 PRLHP81277 87 aa5.04□□□□□ -1.6
TDP1-201ENST00000335725 K7EIL1 84 aa5.03□□□□□ -1.6
TDP1-201ENST00000335725 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
TDP1-201ENST00000335725 MUC6Q6W4X9 2439 aa5.03□□□□□ -1.6
TDP1-201ENST00000335725 A0A1W2PPR1 153 aa5.02□□□□□ -1.61
TDP1-201ENST00000335725 Q6YL49 198 aa5.02□□□□□ -1.61
TDP1-201ENST00000335725 H0YAA0 97 aa5.02□□□□□ -1.61
TDP1-201ENST00000335725 ADGRG4Q8IZF6 3080 aa5.02□□□□□ -1.61
TDP1-201ENST00000335725 PSORS1C2Q9UIG4 136 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms