RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TLN2Q9Y4G6 2542 aa6.48□□□□□ -1.37
COL4A6-201ENST00000334504 LINC01554Q52M75 96 aa6.48□□□□□ -1.37
COL4A6-201ENST00000334504 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
COL4A6-201ENST00000334504 OBSCN-AS1Q96MR7 158 aa6.46□□□□□ -1.37
COL4A6-201ENST00000334504 Q8NAQ8 132 aa6.46□□□□□ -1.38
COL4A6-201ENST00000334504 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
COL4A6-201ENST00000334504 FASNP49327 2511 aaKnown RBP6.45□□□□□ -1.38
COL4A6-201ENST00000334504 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
COL4A6-201ENST00000334504 COL27A1Q8IZC6 1860 aaPredicted RBP6.45□□□□□ -1.38
COL4A6-201ENST00000334504 EP400Q96L91 3159 aa6.44□□□□□ -1.38
COL4A6-201ENST00000334504 WDR87Q6ZQQ6 2873 aa6.44□□□□□ -1.38
COL4A6-201ENST00000334504 ANKRD11Q6UB99 2663 aaPredicted RBP6.43□□□□□ -1.38
COL4A6-201ENST00000334504 SPTBN4Q9H254 2564 aa6.42□□□□□ -1.38
COL4A6-201ENST00000334504 C9orf163Q8N9P6 203 aa6.42□□□□□ -1.38
COL4A6-201ENST00000334504 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
COL4A6-201ENST00000334504 Q8N1X5 172 aa6.42□□□□□ -1.38
COL4A6-201ENST00000334504 A0A1W2PNM2 257 aa6.41□□□□□ -1.38
COL4A6-201ENST00000334504 COL4A2P08572 1712 aa6.41□□□□□ -1.38
COL4A6-201ENST00000334504 M0R2T5 61 aa6.41□□□□□ -1.38
COL4A6-201ENST00000334504 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
COL4A6-201ENST00000334504 Q75L30 129 aa6.41□□□□□ -1.38
COL4A6-201ENST00000334504 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
COL4A6-201ENST00000334504 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.38
COL4A6-201ENST00000334504 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
COL4A6-201ENST00000334504 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.39
COL4A6-201ENST00000334504 OCR1Q9BZK8 76 aa6.39□□□□□ -1.39
COL4A6-201ENST00000334504 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
COL4A6-201ENST00000334504 SETD2Q9BYW2 2564 aaPredicted RBP6.38□□□□□ -1.39
COL4A6-201ENST00000334504 FP248Q71RG6 208 aaPredicted RBP6.37□□□□□ -1.39
COL4A6-201ENST00000334504 ANAPC11Q9NYG5 84 aa6.37□□□□□ -1.39
COL4A6-201ENST00000334504 CEP295Q9C0D2 2601 aa6.37□□□□□ -1.39
COL4A6-201ENST00000334504 KLK9Q2XQG4 91 aa6.36□□□□□ -1.39
COL4A6-201ENST00000334504 LINC00304Q8N9R0 145 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 ZNF861PO60384 105 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 PRR34Q9NV39 138 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 POLQO75417 2590 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 PLA2G2DQ9UNK4 145 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 CSNK1G2-AS1Q8NCQ2 148 aa6.35□□□□□ -1.39
COL4A6-201ENST00000334504 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
COL4A6-201ENST00000334504 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
COL4A6-201ENST00000334504 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
COL4A6-201ENST00000334504 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
COL4A6-201ENST00000334504 USP9YO00507 2555 aaPredicted RBP6.32□□□□□ -1.4
COL4A6-201ENST00000334504 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
COL4A6-201ENST00000334504 MTORP42345 2549 aa6.3□□□□□ -1.4
COL4A6-201ENST00000334504 Q8N9P0 234 aaPredicted RBP6.3□□□□□ -1.4
COL4A6-201ENST00000334504 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
COL4A6-201ENST00000334504 A0A1B0GU33 70 aa6.3□□□□□ -1.4
COL4A6-201ENST00000334504 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
COL4A6-201ENST00000334504 Q5VV11 94 aa6.29□□□□□ -1.4
COL4A6-201ENST00000334504 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
COL4A6-201ENST00000334504 A0A0A0MQY5 61 aa6.27□□□□□ -1.41
COL4A6-201ENST00000334504 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
COL4A6-201ENST00000334504 CENPFP49454 3210 aa6.27□□□□□ -1.41
COL4A6-201ENST00000334504 PCSK5Q92824 1860 aa6.26□□□□□ -1.41
COL4A6-201ENST00000334504 HRES1P13985 223 aa6.26□□□□□ -1.41
COL4A6-201ENST00000334504 K7EIL1 84 aa6.26□□□□□ -1.41
COL4A6-201ENST00000334504 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
COL4A6-201ENST00000334504 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
COL4A6-201ENST00000334504 OXTP01178 125 aa6.25□□□□□ -1.41
COL4A6-201ENST00000334504 F8P00451 2351 aa6.25□□□□□ -1.41
COL4A6-201ENST00000334504 GIG44P09565 113 aaPredicted RBP6.25□□□□□ -1.41
COL4A6-201ENST00000334504 ACANP16112 2415 aa6.25□□□□□ -1.41
COL4A6-201ENST00000334504 ANKRD17O75179 2603 aaKnown RBP6.24□□□□□ -1.41
COL4A6-201ENST00000334504 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
COL4A6-201ENST00000334504 PSORS1C2Q9UIG4 136 aa6.24□□□□□ -1.41
COL4A6-201ENST00000334504 CASC10Q5T4H9 136 aa6.24□□□□□ -1.41
COL4A6-201ENST00000334504 SPINK7P58062 85 aa6.24□□□□□ -1.41
COL4A6-201ENST00000334504 LINC00612Q8N6U2 182 aa6.22□□□□□ -1.41
COL4A6-201ENST00000334504 DMAC1Q96GE9 116 aa6.22□□□□□ -1.41
COL4A6-201ENST00000334504 UTRNP46939 3433 aa6.21□□□□□ -1.42
COL4A6-201ENST00000334504 A0A087WTM6 91 aa6.21□□□□□ -1.42
COL4A6-201ENST00000334504 A0A096LNT2 108 aa6.19□□□□□ -1.42
COL4A6-201ENST00000334504 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
COL4A6-201ENST00000334504 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
COL4A6-201ENST00000334504 EPG5Q9HCE0 2579 aa6.18□□□□□ -1.42
COL4A6-201ENST00000334504 FLNBO75369 2602 aaKnown RBP6.17□□□□□ -1.42
COL4A6-201ENST00000334504 MMP24-AS1A0A0U1RRL7 71 aa6.16□□□□□ -1.42
COL4A6-201ENST00000334504 Q6ZSA8 131 aa6.16□□□□□ -1.42
COL4A6-201ENST00000334504 KRTAP10-3P60369 221 aa6.14□□□□□ -1.43
COL4A6-201ENST00000334504 DNAH12Q6ZR08 3092 aa6.12□□□□□ -1.43
COL4A6-201ENST00000334504 ROMO1P60602 79 aa6.09□□□□□ -1.43
COL4A6-201ENST00000334504 Q5W150 140 aa6.08□□□□□ -1.44
COL4A6-201ENST00000334504 S4R3F8 94 aa6.07□□□□□ -1.44
COL4A6-201ENST00000334504 ZCCHC13Q8WW36 166 aaKnown RBP6.07□□□□□ -1.44
COL4A6-201ENST00000334504 CR1P17927 2039 aa6.07□□□□□ -1.44
COL4A6-201ENST00000334504 HECTD1Q9ULT8 2610 aa6.07□□□□□ -1.44
COL4A6-201ENST00000334504 Q8NDZ9 215 aa6.06□□□□□ -1.44
COL4A6-201ENST00000334504 USP24Q9UPU5 2620 aa6.06□□□□□ -1.44
COL4A6-201ENST00000334504 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
COL4A6-201ENST00000334504 PCNTO95613 3336 aa6.06□□□□□ -1.44
COL4A6-201ENST00000334504 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
COL4A6-201ENST00000334504 TNP2Q05952 138 aa6.06□□□□□ -1.44
COL4A6-201ENST00000334504 Q5VSD8 79 aa6.05□□□□□ -1.44
COL4A6-201ENST00000334504 MGAM2Q2M2H8 2515 aa6.03□□□□□ -1.44
COL4A6-201ENST00000334504 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
COL4A6-201ENST00000334504 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
COL4A6-201ENST00000334504 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.01□□□□□ -1.45
COL4A6-201ENST00000334504 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms