RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
CLCNKA-201ENST00000331433 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
CLCNKA-201ENST00000331433 UBL5Q9BZL1 73 aa9.62□□□□□ -0.87
CLCNKA-201ENST00000331433 KRTAP1-5Q9BYS1 174 aa9.61□□□□□ -0.87
CLCNKA-201ENST00000331433 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
CLCNKA-201ENST00000331433 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
CLCNKA-201ENST00000331433 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
CLCNKA-201ENST00000331433 TRBV7-4A0A0J9YYF1 115 aa9.59□□□□□ -0.87
CLCNKA-201ENST00000331433 GHRHP01286 108 aa9.59□□□□□ -0.87
CLCNKA-201ENST00000331433 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
CLCNKA-201ENST00000331433 CSMD3Q7Z407 3707 aa9.58□□□□□ -0.88
CLCNKA-201ENST00000331433 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
CLCNKA-201ENST00000331433 PDE6GP18545 87 aa9.57□□□□□ -0.88
CLCNKA-201ENST00000331433 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
CLCNKA-201ENST00000331433 FAM19A1Q7Z5A9 133 aa9.57□□□□□ -0.88
CLCNKA-201ENST00000331433 DNAH7Q8WXX0 4024 aa9.56□□□□□ -0.88
CLCNKA-201ENST00000331433 IGLV1-50A0A075B6I6 118 aa9.56□□□□□ -0.88
CLCNKA-201ENST00000331433 DEFB105AQ8NG35 78 aa9.56□□□□□ -0.88
CLCNKA-201ENST00000331433 IGLV5-37A0A075B6J1 123 aa9.56□□□□□ -0.88
CLCNKA-201ENST00000331433 ATOX1O00244 68 aa9.56□□□□□ -0.88
CLCNKA-201ENST00000331433 Q6ZVQ6 151 aa9.55□□□□□ -0.88
CLCNKA-201ENST00000331433 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
CLCNKA-201ENST00000331433 C3orf22Q8N5N4 141 aa9.55□□□□□ -0.88
CLCNKA-201ENST00000331433 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
CLCNKA-201ENST00000331433 KRTAP4-16G5E9R7 235 aaPredicted RBP9.54□□□□□ -0.88
CLCNKA-201ENST00000331433 Q6ZRX8 168 aa9.54□□□□□ -0.88
CLCNKA-201ENST00000331433 HAMPP81172 84 aa9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 Q9BRP9 147 aa9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 APLNQ9ULZ1 77 aa9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 PRYO14603 147 aa9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 UQCRQO14949 82 aa9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
CLCNKA-201ENST00000331433 ETDCA0A1B0GVM5 59 aa9.52□□□□□ -0.89
CLCNKA-201ENST00000331433 Q8N377 158 aa9.52□□□□□ -0.89
CLCNKA-201ENST00000331433 PSCAO43653 123 aa9.51□□□□□ -0.89
CLCNKA-201ENST00000331433 COX7CP15954 63 aa9.51□□□□□ -0.89
CLCNKA-201ENST00000331433 SPRR1AP35321 89 aa9.51□□□□□ -0.89
CLCNKA-201ENST00000331433 C9orf153Q5TBE3 101 aa9.51□□□□□ -0.89
CLCNKA-201ENST00000331433 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
CLCNKA-201ENST00000331433 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
CLCNKA-201ENST00000331433 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
CLCNKA-201ENST00000331433 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
CLCNKA-201ENST00000331433 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
CLCNKA-201ENST00000331433 A0A096LNI7 61 aa9.49□□□□□ -0.89
CLCNKA-201ENST00000331433 ST20-AS1Q8NBB2 130 aa9.49□□□□□ -0.89
CLCNKA-201ENST00000331433 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
CLCNKA-201ENST00000331433 ERC2-IT1O76042 136 aa9.47□□□□□ -0.89
CLCNKA-201ENST00000331433 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
CLCNKA-201ENST00000331433 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
CLCNKA-201ENST00000331433 CNBPP62633 177 aaKnown RBP9.46□□□□□ -0.9
CLCNKA-201ENST00000331433 SERP2Q8N6R1 65 aa9.46□□□□□ -0.9
CLCNKA-201ENST00000331433 MEGF8Q7Z7M0 2845 aa9.46□□□□□ -0.9
CLCNKA-201ENST00000331433 UBE2BP63146 152 aa9.45□□□□□ -0.9
CLCNKA-201ENST00000331433 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
CLCNKA-201ENST00000331433 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
CLCNKA-201ENST00000331433 C16orf90A8MZG2 172 aa9.44□□□□□ -0.9
CLCNKA-201ENST00000331433 CXCL6P80162 114 aa9.44□□□□□ -0.9
CLCNKA-201ENST00000331433 IGLV5-48A0A075B6I7 105 aa9.43□□□□□ -0.9
CLCNKA-201ENST00000331433 C3orf84H3BNL1 204 aa9.43□□□□□ -0.9
CLCNKA-201ENST00000331433 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
CLCNKA-201ENST00000331433 CRYGAP11844 174 aa9.42□□□□□ -0.9
CLCNKA-201ENST00000331433 STARD9Q9P2P6 4700 aa9.41□□□□□ -0.9
CLCNKA-201ENST00000331433 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
CLCNKA-201ENST00000331433 TNP2Q05952 138 aa9.39□□□□□ -0.91
CLCNKA-201ENST00000331433 PRLHP81277 87 aa9.39□□□□□ -0.91
CLCNKA-201ENST00000331433 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
CLCNKA-201ENST00000331433 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
CLCNKA-201ENST00000331433 NREPQ16612 68 aa9.38□□□□□ -0.91
CLCNKA-201ENST00000331433 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
CLCNKA-201ENST00000331433 A0A1W2PNM2 257 aa9.37□□□□□ -0.91
CLCNKA-201ENST00000331433 NUPR2A6NF83 97 aa9.37□□□□□ -0.91
CLCNKA-201ENST00000331433 Q8N9L7 120 aa9.37□□□□□ -0.91
CLCNKA-201ENST00000331433 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
CLCNKA-201ENST00000331433 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
CLCNKA-201ENST00000331433 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
CLCNKA-201ENST00000331433 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLCNKA-201ENST00000331433 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
CLCNKA-201ENST00000331433 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
CLCNKA-201ENST00000331433 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
CLCNKA-201ENST00000331433 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
CLCNKA-201ENST00000331433 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
CLCNKA-201ENST00000331433 SMIM20Q8N5G0 67 aa9.32□□□□□ -0.92
CLCNKA-201ENST00000331433 Q8NBF4 154 aa9.32□□□□□ -0.92
CLCNKA-201ENST00000331433 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
CLCNKA-201ENST00000331433 BPY2O14599 106 aa9.31□□□□□ -0.92
CLCNKA-201ENST00000331433 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
CLCNKA-201ENST00000331433 VPS13DQ5THJ4 4388 aa9.3□□□□□ -0.92
CLCNKA-201ENST00000331433 PANO1I0J062 215 aa9.3□□□□□ -0.92
CLCNKA-201ENST00000331433 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
CLCNKA-201ENST00000331433 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
CLCNKA-201ENST00000331433 TRAV7A0A075B6U4 112 aa9.29□□□□□ -0.92
CLCNKA-201ENST00000331433 BCE1O60756 84 aa9.29□□□□□ -0.92
CLCNKA-201ENST00000331433 TGP01266 2768 aa9.28□□□□□ -0.92
CLCNKA-201ENST00000331433 F8WEM9 126 aa9.28□□□□□ -0.92
CLCNKA-201ENST00000331433 SPRR4Q96PI1 79 aa9.28□□□□□ -0.92
CLCNKA-201ENST00000331433 KMT2AQ03164 3969 aa9.27□□□□□ -0.92
CLCNKA-201ENST00000331433 EPM2AB3EWF7 344 aa9.27□□□□□ -0.93
CLCNKA-201ENST00000331433 FBN3Q75N90 2809 aa9.26□□□□□ -0.93
CLCNKA-201ENST00000331433 A0A1B0GW54 56 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms