RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 CRYGAP11844 174 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 C9orf153Q5TBE3 101 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 LYRM7Q5U5X0 104 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 SPINK6Q6UWN8 80 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 C18orf32Q8TCD1 76 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 RAB37Q96AX2 223 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 TOMM6Q96B49 74 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 VPS13BQ7Z7G8 4022 aa3.94□□□□□ -1.78
SMG1-201ENST00000330588 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
SMG1-201ENST00000330588 H3BMG7 143 aa3.93□□□□□ -1.78
SMG1-201ENST00000330588 KIAA0087Q14695 138 aa3.93□□□□□ -1.78
SMG1-201ENST00000330588 OPRPNQ99935 248 aaPredicted RBP3.93□□□□□ -1.78
SMG1-201ENST00000330588 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
SMG1-201ENST00000330588 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMG1-201ENST00000330588 PRR15Q8IV56 129 aa3.93□□□□□ -1.78
SMG1-201ENST00000330588 Q8IZM0 81 aa3.93□□□□□ -1.78
SMG1-201ENST00000330588 FLG2Q5D862 2391 aaPredicted RBP3.92□□□□□ -1.78
SMG1-201ENST00000330588 LOC389332A0A1B0GUA5 103 aa3.92□□□□□ -1.78
SMG1-201ENST00000330588 SNCGO76070 127 aa3.92□□□□□ -1.78
SMG1-201ENST00000330588 CXCL5P42830 114 aa3.92□□□□□ -1.78
SMG1-201ENST00000330588 REG3GQ6UW15 175 aa3.92□□□□□ -1.78
SMG1-201ENST00000330588 LINC01600Q96MT4 127 aa3.92□□□□□ -1.78
SMG1-201ENST00000330588 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
SMG1-201ENST00000330588 TRBV20-1A0A075B6N2 111 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 A0A0J9YXV3 536 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 NDUFC2-KCTD14E9PQ53 114 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
SMG1-201ENST00000330588 ANKRD29Q8N6D5 301 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 IMUPQ9GZP8 106 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 C6orf48Q9UBA6 75 aa3.91□□□□□ -1.78
SMG1-201ENST00000330588 A0A1W2PNN7 141 aa3.9□□□□□ -1.78
SMG1-201ENST00000330588 SYS1-DBNDD2H3BUS1 97 aa3.9□□□□□ -1.78
SMG1-201ENST00000330588 UNQ6190/PRO20217Q6UXQ8 127 aa3.9□□□□□ -1.78
SMG1-201ENST00000330588 PPDPFLQ8WWR9 84 aa3.9□□□□□ -1.78
SMG1-201ENST00000330588 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 TRBV7-6A0A0J9YX20 115 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 H3BUT2 72 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 PRSS2P07478 247 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 SLC25A34Q6PIV7 304 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 SCGB3A1Q96QR1 104 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 TP73-AS1Q9UF72 201 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 SRRM2Q9UQ35 2752 aaKnown RBP3.89□□□□□ -1.79
SMG1-201ENST00000330588 F8VRH5 84 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 CDKN2A-AS1Q9UH64 79 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 PSORS1C2Q9UIG4 136 aa3.89□□□□□ -1.79
SMG1-201ENST00000330588 TRBV7-7A0A0K0K1E9 115 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 C8orf87E5RJ46 101 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 TRACP01848 142 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 SCGB1D4Q6XE38 83 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 COPS9Q8WXC6 57 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 RBM12B-AS1Q9P1G2 102 aa3.88□□□□□ -1.79
SMG1-201ENST00000330588 DNAH8Q96JB1 4490 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 NUPR1O60356 82 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 COX7CP15954 63 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 DIRC1Q969H9 104 aa3.87□□□□□ -1.79
SMG1-201ENST00000330588 C9orf129Q5T035 196 aaKnown RBP3.86□□□□□ -1.79
SMG1-201ENST00000330588 ZC2HC1BQ5TFG8 222 aa3.86□□□□□ -1.79
SMG1-201ENST00000330588 PHF5AQ7RTV0 110 aaKnown RBP3.86□□□□□ -1.79
SMG1-201ENST00000330588 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
SMG1-201ENST00000330588 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 A0A096LNJ9 63 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 H0Y9J4 135 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 HBDP02042 147 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 COX7B2Q8TF08 81 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 TOMM7Q9P0U1 55 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 TRAPPC1Q9Y5R8 145 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 IGLV1-50A0A075B6I6 118 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 E9PLD3 99 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 COX17Q14061 63 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 LINC01545Q5VT33 79 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 TEN1Q86WV5 123 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
SMG1-201ENST00000330588 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
SMG1-201ENST00000330588 KRTDAPP60985 99 aa3.84□□□□□ -1.8
SMG1-201ENST00000330588 LCE1EQ5T753 118 aa3.84□□□□□ -1.8
SMG1-201ENST00000330588 TRAV12-1A0A0B4J245 112 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 H3BT86 120 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 C3orf79P0CE67 100 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 SMIM13P0DJ93 91 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 ZNF22P17026 224 aaPredicted RBP3.83□□□□□ -1.8
SMG1-201ENST00000330588 UBE2BP63146 152 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 Q75L30 129 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms