RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PHF5AQ7RTV0 110 aaKnown RBP5.58□□□□□ -1.52
SKA2-201ENST00000330137 Q8N9L7 120 aa5.58□□□□□ -1.52
SKA2-201ENST00000330137 Q9BRP9 147 aa5.58□□□□□ -1.52
SKA2-201ENST00000330137 SORL1Q92673 2214 aa5.58□□□□□ -1.52
SKA2-201ENST00000330137 UNQ6190/PRO20217Q6UXQ8 127 aa5.58□□□□□ -1.52
SKA2-201ENST00000330137 KHDC1LQ5JSQ8 128 aa5.57□□□□□ -1.52
SKA2-201ENST00000330137 Q5VV11 94 aa5.57□□□□□ -1.52
SKA2-201ENST00000330137 FAM30AQ9NZY2 134 aa5.57□□□□□ -1.52
SKA2-201ENST00000330137 PSPHP1O15172 72 aa5.57□□□□□ -1.52
SKA2-201ENST00000330137 VPREB1P12018 145 aa5.57□□□□□ -1.52
SKA2-201ENST00000330137 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.56□□□□□ -1.52
SKA2-201ENST00000330137 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
SKA2-201ENST00000330137 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
SKA2-201ENST00000330137 KCNQ1DNQ9H478 68 aa5.56□□□□□ -1.52
SKA2-201ENST00000330137 RETNQ9HD89 108 aa5.56□□□□□ -1.52
SKA2-201ENST00000330137 INAFM1C9JVW0 142 aa5.55□□□□□ -1.52
SKA2-201ENST00000330137 KPRPQ5T749 579 aaPredicted RBP5.55□□□□□ -1.52
SKA2-201ENST00000330137 CR1P17927 2039 aa5.55□□□□□ -1.52
SKA2-201ENST00000330137 ANGP03950 147 aaKnown RBP5.55□□□□□ -1.52
SKA2-201ENST00000330137 A8MUN3 132 aa5.55□□□□□ -1.52
SKA2-201ENST00000330137 B9D2Q9BPU9 175 aa5.55□□□□□ -1.52
SKA2-201ENST00000330137 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
SKA2-201ENST00000330137 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 MP68P56378 58 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 CLPSL2Q6UWE3 100 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 Q75L30 129 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 C19orf73Q9NVV2 129 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 ZANQ9Y493 2812 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 ZFHX3Q15911 3703 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 EGFEM1PQ0D2K5 195 aa5.54□□□□□ -1.52
SKA2-201ENST00000330137 MTORP42345 2549 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 TLN2Q9Y4G6 2542 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 CSPG4Q6UVK1 2322 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 RBM12B-AS1Q9P1G2 102 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 C6orf48Q9UBA6 75 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
SKA2-201ENST00000330137 Q8NBF4 154 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 DHRS4-AS1Q9P1J3 65 aa5.53□□□□□ -1.52
SKA2-201ENST00000330137 HIVEP2P31629 2446 aa5.52□□□□□ -1.53
SKA2-201ENST00000330137 SETD2Q9BYW2 2564 aaPredicted RBP5.52□□□□□ -1.53
SKA2-201ENST00000330137 LRCOL1A6NCL2 159 aa5.52□□□□□ -1.53
SKA2-201ENST00000330137 C3orf84H3BNL1 204 aa5.52□□□□□ -1.53
SKA2-201ENST00000330137 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
SKA2-201ENST00000330137 SVEP1Q4LDE5 3571 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 DSCR10P59022 87 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 IGLV1-51P01701 117 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 KRTAP1-1Q07627 177 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 Q8N377 158 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
SKA2-201ENST00000330137 LELP1Q5T871 98 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 IGLV10-54A0A075B6I4 117 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 A6NN06 94 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 SONP18583 2426 aaKnown RBP5.5□□□□□ -1.53
SKA2-201ENST00000330137 DEFB130BP0DP73 79 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 DEFB130AP0DP74 79 aa5.5□□□□□ -1.53
SKA2-201ENST00000330137 C2CD3Q4AC94 2353 aa5.49□□□□□ -1.53
SKA2-201ENST00000330137 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
SKA2-201ENST00000330137 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.49□□□□□ -1.536e-8■■■□□ 16
SKA2-201ENST00000330137 C1orf137Q5JT78 98 aa5.49□□□□□ -1.53
SKA2-201ENST00000330137 NSD1Q96L73 2696 aaPredicted RBP5.48□□□□□ -1.53
SKA2-201ENST00000330137 NF1P21359 2839 aa5.48□□□□□ -1.53
SKA2-201ENST00000330137 XAGE1AQ9HD64 81 aa5.48□□□□□ -1.53
SKA2-201ENST00000330137 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
SKA2-201ENST00000330137 PLA2G2DQ9UNK4 145 aa5.47□□□□□ -1.53
SKA2-201ENST00000330137 FN1P02751 2386 aaKnown RBP5.47□□□□□ -1.53
SKA2-201ENST00000330137 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
SKA2-201ENST00000330137 K7EQZ3 153 aa5.46□□□□□ -1.53
SKA2-201ENST00000330137 CUBNO60494 3623 aa5.46□□□□□ -1.54
SKA2-201ENST00000330137 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.54
SKA2-201ENST00000330137 X6R8D5 127 aa5.45□□□□□ -1.54
SKA2-201ENST00000330137 JMJD1CQ15652 2540 aa5.45□□□□□ -1.54
SKA2-201ENST00000330137 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
SKA2-201ENST00000330137 Q6ZRX8 168 aa5.44□□□□□ -1.54
SKA2-201ENST00000330137 LCA10Q71F78 164 aa5.44□□□□□ -1.54
SKA2-201ENST00000330137 SPRR1AP35321 89 aa5.44□□□□□ -1.54
SKA2-201ENST00000330137 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
SKA2-201ENST00000330137 WNK1Q9H4A3 2382 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 IGKV2D-24A0A075B6R9 120 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 A0A096LPF7 62 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 A6NED7 52 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
SKA2-201ENST00000330137 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
SKA2-201ENST00000330137 WFDC10AQ9H1F0 79 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
SKA2-201ENST00000330137 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
SKA2-201ENST00000330137 A0A087X002 238 aa5.42□□□□□ -1.54
SKA2-201ENST00000330137 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
SKA2-201ENST00000330137 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
SKA2-201ENST00000330137 H3BS24 57 aa5.41□□□□□ -1.54
SKA2-201ENST00000330137 TLX1NBP0CAT3 122 aa5.41□□□□□ -1.54
SKA2-201ENST00000330137 SPTSSBQ8NFR3 76 aa5.41□□□□□ -1.54
SKA2-201ENST00000330137 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
SKA2-201ENST00000330137 DEFB105AQ8NG35 78 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms