RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 TRAV23DV6A0A075B6W5 121 aa11.29□□□□□ -0.6
MRPL54-201ENST00000330133 KRTAP4-16G5E9R7 235 aaPredicted RBP11.29□□□□□ -0.6
MRPL54-201ENST00000330133 CRYGAP11844 174 aa11.28□□□□□ -0.6
MRPL54-201ENST00000330133 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
MRPL54-201ENST00000330133 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
MRPL54-201ENST00000330133 B5MCH6 92 aa11.27□□□□□ -0.61
MRPL54-201ENST00000330133 ANAPC11Q9NYG5 84 aa11.27□□□□□ -0.61
MRPL54-201ENST00000330133 TMA7Q9Y2S6 64 aaKnown RBP11.26□□□□□ -0.61
MRPL54-201ENST00000330133 ZNF73O43830 326 aaPredicted RBP11.25□□□□□ -0.61
MRPL54-201ENST00000330133 HINT1P49773 126 aaPredicted RBP11.25□□□□□ -0.61
MRPL54-201ENST00000330133 FAM229BQ4G0N7 80 aa11.25□□□□□ -0.61
MRPL54-201ENST00000330133 SMCR5Q8TEV8 140 aa11.25□□□□□ -0.61
MRPL54-201ENST00000330133 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
MRPL54-201ENST00000330133 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
MRPL54-201ENST00000330133 A0A087X002 238 aa11.23□□□□□ -0.61
MRPL54-201ENST00000330133 COX8AP10176 69 aa11.23□□□□□ -0.61
MRPL54-201ENST00000330133 Q6ZRX8 168 aa11.22□□□□□ -0.61
MRPL54-201ENST00000330133 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
MRPL54-201ENST00000330133 SPATA45Q537H7 98 aa11.21□□□□□ -0.61
MRPL54-201ENST00000330133 SPRR4Q96PI1 79 aa11.21□□□□□ -0.61
MRPL54-201ENST00000330133 VAMP8Q9BV40 100 aa11.21□□□□□ -0.61
MRPL54-201ENST00000330133 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.61
MRPL54-201ENST00000330133 A6NDN8 102 aa11.2□□□□□ -0.62
MRPL54-201ENST00000330133 DLEU1O43261 78 aa11.19□□□□□ -0.62
MRPL54-201ENST00000330133 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
MRPL54-201ENST00000330133 Q9BRP9 147 aa11.18□□□□□ -0.62
MRPL54-201ENST00000330133 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
MRPL54-201ENST00000330133 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
MRPL54-201ENST00000330133 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
MRPL54-201ENST00000330133 ERC2-IT1O76042 136 aa11.16□□□□□ -0.62
MRPL54-201ENST00000330133 COX7BP24311 80 aa11.14□□□□□ -0.63
MRPL54-201ENST00000330133 C6orf99Q4VX62 202 aa11.14□□□□□ -0.63
MRPL54-201ENST00000330133 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
MRPL54-201ENST00000330133 A4D1N5 150 aa11.13□□□□□ -0.63
MRPL54-201ENST00000330133 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
MRPL54-201ENST00000330133 DHRS4-AS1Q9P1J3 65 aa11.13□□□□□ -0.63
MRPL54-201ENST00000330133 PYY3Q5JQD4 70 aa11.12□□□□□ -0.63
MRPL54-201ENST00000330133 LINC00483Q53H64 154 aa11.11□□□□□ -0.63
MRPL54-201ENST00000330133 C3orf22Q8N5N4 141 aa11.11□□□□□ -0.63
MRPL54-201ENST00000330133 HIGD1BQ9P298 99 aa11.11□□□□□ -0.63
MRPL54-201ENST00000330133 HMCN2Q8NDA2 5059 aa11.11□□□□□ -0.63
MRPL54-201ENST00000330133 TRBV7-6A0A0J9YX20 115 aa11.1□□□□□ -0.63
MRPL54-201ENST00000330133 ELOF1P60002 83 aaKnown RBP11.1□□□□□ -0.63
MRPL54-201ENST00000330133 A0A1B0GWB2 263 aa11.08□□□□□ -0.64
MRPL54-201ENST00000330133 TSPAN13O95857 204 aa11.08□□□□□ -0.64
MRPL54-201ENST00000330133 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
MRPL54-201ENST00000330133 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
MRPL54-201ENST00000330133 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
MRPL54-201ENST00000330133 C12orf57Q99622 126 aa11.05□□□□□ -0.64
MRPL54-201ENST00000330133 VAMP3Q15836 100 aa11.04□□□□□ -0.64
MRPL54-201ENST00000330133 C2orf91Q6ZV80 131 aa11.04□□□□□ -0.64
MRPL54-201ENST00000330133 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.65
MRPL54-201ENST00000330133 TAL2Q16559 108 aa11.02□□□□□ -0.65
MRPL54-201ENST00000330133 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
MRPL54-201ENST00000330133 SPAG11AQ6PDA7 123 aa11.01□□□□□ -0.65
MRPL54-201ENST00000330133 CTAG1AP78358 180 aa11□□□□□ -0.65
MRPL54-201ENST00000330133 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
MRPL54-201ENST00000330133 MOBPQ13875 183 aa10.99□□□□□ -0.65
MRPL54-201ENST00000330133 SSBP3-AS1Q7Z2R9 100 aa10.99□□□□□ -0.65
MRPL54-201ENST00000330133 CEND1Q8N111 149 aa10.99□□□□□ -0.65
MRPL54-201ENST00000330133 Q8NBF4 154 aa10.99□□□□□ -0.65
MRPL54-201ENST00000330133 RAB37Q96AX2 223 aa10.99□□□□□ -0.65
MRPL54-201ENST00000330133 CFC1BP0CG36 223 aa10.98□□□□□ -0.65
MRPL54-201ENST00000330133 CFC1P0CG37 223 aa10.98□□□□□ -0.65
MRPL54-201ENST00000330133 SPRR1BP22528 89 aa10.98□□□□□ -0.65
MRPL54-201ENST00000330133 PRR4Q16378 134 aa10.98□□□□□ -0.65
MRPL54-201ENST00000330133 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
MRPL54-201ENST00000330133 SLC25A20O43772 301 aa10.97□□□□□ -0.65
MRPL54-201ENST00000330133 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.65
MRPL54-201ENST00000330133 A6NJY4 79 aa10.96□□□□□ -0.65
MRPL54-201ENST00000330133 C9orf153Q5TBE3 101 aa10.96□□□□□ -0.65
MRPL54-201ENST00000330133 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.65
MRPL54-201ENST00000330133 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
MRPL54-201ENST00000330133 TEX49A0A1B0GTD5 131 aa10.95□□□□□ -0.66
MRPL54-201ENST00000330133 H7C2G1 150 aa10.94□□□□□ -0.66
MRPL54-201ENST00000330133 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
MRPL54-201ENST00000330133 BVES-AS1Q5T3Y7 98 aa10.93□□□□□ -0.66
MRPL54-201ENST00000330133 LINC00575Q6W349 94 aa10.93□□□□□ -0.66
MRPL54-201ENST00000330133 HSD52Q0P140 79 aa10.92□□□□□ -0.66
MRPL54-201ENST00000330133 SPINK1P00995 79 aa10.91□□□□□ -0.66
MRPL54-201ENST00000330133 hADV29S1A0JD25 119 aa10.9□□□□□ -0.66
MRPL54-201ENST00000330133 FXYD2P54710 66 aa10.9□□□□□ -0.66
MRPL54-201ENST00000330133 IGLV5-48A0A075B6I7 105 aa10.89□□□□□ -0.67
MRPL54-201ENST00000330133 PRO1854Q9UHT4 67 aa10.89□□□□□ -0.67
MRPL54-201ENST00000330133 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
MRPL54-201ENST00000330133 Q1RN00 199 aa10.88□□□□□ -0.67
MRPL54-201ENST00000330133 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
MRPL54-201ENST00000330133 SNCGO76070 127 aa10.85□□□□□ -0.67
MRPL54-201ENST00000330133 Q8N377 158 aa10.85□□□□□ -0.67
MRPL54-201ENST00000330133 H0YGX0 51 aa10.84□□□□□ -0.67
MRPL54-201ENST00000330133 Q6ZQY7 126 aa10.84□□□□□ -0.67
MRPL54-201ENST00000330133 SMIM29Q86T20 159 aa10.84□□□□□ -0.67
MRPL54-201ENST00000330133 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
MRPL54-201ENST00000330133 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.83□□□□□ -0.68
MRPL54-201ENST00000330133 SMIM6P0DI80 62 aa10.82□□□□□ -0.68
MRPL54-201ENST00000330133 PRO1933Q9H354 126 aa10.82□□□□□ -0.68
MRPL54-201ENST00000330133 LRP2P98164 4655 aa10.8□□□□□ -0.68
MRPL54-201ENST00000330133 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
MRPL54-201ENST00000330133 F8WEM9 126 aa10.79□□□□□ -0.68
MRPL54-201ENST00000330133 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms