RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.95□□□□□ -1.14
SHMT2-201ENST00000328923 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
SHMT2-201ENST00000328923 KLK12Q9UKR0 248 aa7.95□□□□□ -1.14
SHMT2-201ENST00000328923 NOTCH3Q9UM47 2321 aa7.95□□□□□ -1.14
SHMT2-201ENST00000328923 TRGV2A0A075B6R0 118 aa7.95□□□□□ -1.14
SHMT2-201ENST00000328923 KRTAP1-1Q07627 177 aa7.95□□□□□ -1.14
SHMT2-201ENST00000328923 Q8IZM0 81 aa7.94□□□□□ -1.14
SHMT2-201ENST00000328923 COX7BP24311 80 aa7.94□□□□□ -1.14
SHMT2-201ENST00000328923 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
SHMT2-201ENST00000328923 HIVEP2P31629 2446 aa7.94□□□□□ -1.14
SHMT2-201ENST00000328923 ODF3L2Q3SX64 289 aa7.93□□□□□ -1.14
SHMT2-201ENST00000328923 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
SHMT2-201ENST00000328923 C4orf3Q8WVX3 66 aa7.93□□□□□ -1.14
SHMT2-201ENST00000328923 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
SHMT2-201ENST00000328923 DEFB136Q30KP8 78 aa7.93□□□□□ -1.14
SHMT2-201ENST00000328923 FBN3Q75N90 2809 aa7.93□□□□□ -1.14
SHMT2-201ENST00000328923 C3orf84H3BNL1 204 aa7.92□□□□□ -1.14
SHMT2-201ENST00000328923 C18orf65Q6ZTR6 163 aa7.92□□□□□ -1.14
SHMT2-201ENST00000328923 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
SHMT2-201ENST00000328923 ATRQ13535 2644 aa7.92□□□□□ -1.14
SHMT2-201ENST00000328923 COX17Q14061 63 aa7.92□□□□□ -1.14
SHMT2-201ENST00000328923 C9orf116Q5BN46 136 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-201ENST00000328923 MDFIQ99750 246 aa7.92□□□□□ -1.14
SHMT2-201ENST00000328923 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
SHMT2-201ENST00000328923 DNAJC9-AS1A6NH13 148 aa7.91□□□□□ -1.14
SHMT2-201ENST00000328923 C16orf74Q96GX8 76 aa7.91□□□□□ -1.14
SHMT2-201ENST00000328923 ANK3Q12955 4377 aaKnown RBP7.91□□□□□ -1.14
SHMT2-201ENST00000328923 H3BQ85 93 aa7.91□□□□□ -1.14
SHMT2-201ENST00000328923 MOBPQ13875 183 aa7.91□□□□□ -1.14
SHMT2-201ENST00000328923 Q75L30 129 aa7.91□□□□□ -1.14
SHMT2-201ENST00000328923 NOP10Q9NPE3 64 aaKnown RBP7.9□□□□□ -1.14
SHMT2-201ENST00000328923 NKAPP1Q8N9T2 125 aa7.9□□□□□ -1.15
SHMT2-201ENST00000328923 B9D2Q9BPU9 175 aa7.9□□□□□ -1.15
SHMT2-201ENST00000328923 LOC100131303A0A0U1RQF7 123 aa7.89□□□□□ -1.15
SHMT2-201ENST00000328923 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
SHMT2-201ENST00000328923 STAB1Q9NY15 2570 aa7.89□□□□□ -1.15
SHMT2-201ENST00000328923 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
SHMT2-201ENST00000328923 ETDCA0A1B0GVM5 59 aa7.88□□□□□ -1.15
SHMT2-201ENST00000328923 KHDC1LQ5JSQ8 128 aa7.88□□□□□ -1.15
SHMT2-201ENST00000328923 PRAC1Q96KF2 57 aa7.88□□□□□ -1.15
SHMT2-201ENST00000328923 FBN1P35555 2871 aaKnown RBP7.86□□□□□ -1.15
SHMT2-201ENST00000328923 A0A1B0GUV1 79 aa7.86□□□□□ -1.15
SHMT2-201ENST00000328923 IGHV4-28A0A0C4DH34 117 aa7.86□□□□□ -1.15
SHMT2-201ENST00000328923 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
SHMT2-201ENST00000328923 LINC00208Q96KT6 92 aa7.86□□□□□ -1.15
SHMT2-201ENST00000328923 INAFM1C9JVW0 142 aa7.85□□□□□ -1.15
SHMT2-201ENST00000328923 CMC4P56277 68 aaPredicted RBP7.85□□□□□ -1.15
SHMT2-201ENST00000328923 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
SHMT2-201ENST00000328923 IGHV4-30-4P0DP06 118 aa7.84□□□□□ -1.15
SHMT2-201ENST00000328923 LINC00313P59037 77 aa7.84□□□□□ -1.15
SHMT2-201ENST00000328923 CLPSL2Q6UWE3 100 aa7.84□□□□□ -1.15
SHMT2-201ENST00000328923 GIG44P09565 113 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-201ENST00000328923 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
SHMT2-201ENST00000328923 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
SHMT2-201ENST00000328923 NDUFB1O75438 58 aa7.82□□□□□ -1.16
SHMT2-201ENST00000328923 ELOF1P60002 83 aaKnown RBP7.81□□□□□ -1.16
SHMT2-201ENST00000328923 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
SHMT2-201ENST00000328923 VWFP04275 2813 aa7.79□□□□□ -1.16
SHMT2-201ENST00000328923 CCL24O00175 119 aa7.79□□□□□ -1.16
SHMT2-201ENST00000328923 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
SHMT2-201ENST00000328923 CSNK1G2-AS1Q8NCQ2 148 aa7.79□□□□□ -1.16
SHMT2-201ENST00000328923 Q9BRP9 147 aa7.78□□□□□ -1.16
SHMT2-201ENST00000328923 NBEAL1Q6ZS30 2694 aa7.78□□□□□ -1.16
SHMT2-201ENST00000328923 NBEAL2Q6ZNJ1 2754 aa7.77□□□□□ -1.17
SHMT2-201ENST00000328923 K7EQZ3 153 aa7.77□□□□□ -1.17
SHMT2-201ENST00000328923 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
SHMT2-201ENST00000328923 DSCR10P59022 87 aa7.75□□□□□ -1.17
SHMT2-201ENST00000328923 GYPEP15421 78 aa7.75□□□□□ -1.17
SHMT2-201ENST00000328923 SPINK7P58062 85 aa7.75□□□□□ -1.17
SHMT2-201ENST00000328923 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
SHMT2-201ENST00000328923 CHCHD10Q8WYQ3 142 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-201ENST00000328923 WFDC10AQ9H1F0 79 aa7.75□□□□□ -1.17
SHMT2-201ENST00000328923 A0A0J9YWU9 116 aa7.74□□□□□ -1.17
SHMT2-201ENST00000328923 MP68P56378 58 aa7.73□□□□□ -1.17
SHMT2-201ENST00000328923 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
SHMT2-201ENST00000328923 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SHMT2-201ENST00000328923 COA5Q86WW8 74 aa7.73□□□□□ -1.17
SHMT2-201ENST00000328923 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
SHMT2-201ENST00000328923 KCNQ1DNQ9H478 68 aa7.73□□□□□ -1.17
SHMT2-201ENST00000328923 IGLV10-54A0A075B6I4 117 aa7.72□□□□□ -1.17
SHMT2-201ENST00000328923 TRRAPQ9Y4A5 3859 aa7.72□□□□□ -1.17
SHMT2-201ENST00000328923 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
SHMT2-201ENST00000328923 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
SHMT2-201ENST00000328923 PRO0255Q9UI72 69 aa7.71□□□□□ -1.18
SHMT2-201ENST00000328923 TENM1Q9UKZ4 2725 aa7.7□□□□□ -1.18
SHMT2-201ENST00000328923 REG3AQ06141 175 aa7.7□□□□□ -1.18
SHMT2-201ENST00000328923 DEFB105AQ8NG35 78 aa7.7□□□□□ -1.18
SHMT2-201ENST00000328923 A0A1W2PNM2 257 aa7.7□□□□□ -1.18
SHMT2-201ENST00000328923 VPREB1P12018 145 aa7.7□□□□□ -1.18
SHMT2-201ENST00000328923 KPRPQ5T749 579 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-201ENST00000328923 SPAG11AQ6PDA7 123 aa7.7□□□□□ -1.18
SHMT2-201ENST00000328923 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
SHMT2-201ENST00000328923 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
SHMT2-201ENST00000328923 DEFB130BP0DP73 79 aa7.69□□□□□ -1.18
SHMT2-201ENST00000328923 DEFB130AP0DP74 79 aa7.69□□□□□ -1.18
SHMT2-201ENST00000328923 KRTAP10-3P60369 221 aa7.69□□□□□ -1.18
SHMT2-201ENST00000328923 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
SHMT2-201ENST00000328923 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
SHMT2-201ENST00000328923 Q8NAQ8 132 aa7.68□□□□□ -1.18
SHMT2-201ENST00000328923 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms