RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 PDE6GP18545 87 aa9.23□□□□□ -0.93
ATP2C1-201ENST00000328560 PKIGQ9Y2B9 76 aa9.23□□□□□ -0.93
ATP2C1-201ENST00000328560 SERTAD4-AS1Q5TG53 156 aa9.22□□□□□ -0.93
ATP2C1-201ENST00000328560 C4orf26Q17RF5 130 aa9.22□□□□□ -0.93
ATP2C1-201ENST00000328560 LINC00528Q8N1L1 170 aa9.22□□□□□ -0.93
ATP2C1-201ENST00000328560 H3BQ85 93 aa9.21□□□□□ -0.94
ATP2C1-201ENST00000328560 CASC10Q5T4H9 136 aa9.2□□□□□ -0.94
ATP2C1-201ENST00000328560 TRBV7-4A0A0J9YYF1 115 aa9.2□□□□□ -0.94
ATP2C1-201ENST00000328560 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
ATP2C1-201ENST00000328560 FAM168BA1KXE4 195 aa9.19□□□□□ -0.94
ATP2C1-201ENST00000328560 C3orf84H3BNL1 204 aa9.19□□□□□ -0.94
ATP2C1-201ENST00000328560 Q8N9L7 120 aa9.18□□□□□ -0.94
ATP2C1-201ENST00000328560 RMI2Q96E14 147 aa9.18□□□□□ -0.94
ATP2C1-201ENST00000328560 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
ATP2C1-201ENST00000328560 TRBV7-6A0A0J9YX20 115 aa9.18□□□□□ -0.94
ATP2C1-201ENST00000328560 TMEM258P61165 79 aa9.16□□□□□ -0.94
ATP2C1-201ENST00000328560 LINC00588Q9Y4M8 146 aa9.16□□□□□ -0.94
ATP2C1-201ENST00000328560 NBEAL1Q6ZS30 2694 aa9.16□□□□□ -0.94
ATP2C1-201ENST00000328560 SNURFQ9Y675 71 aa9.15□□□□□ -0.94
ATP2C1-201ENST00000328560 DNAH10OSP0CZ25 163 aa9.15□□□□□ -0.95
ATP2C1-201ENST00000328560 NREPQ16612 68 aa9.14□□□□□ -0.95
ATP2C1-201ENST00000328560 MGAM2Q2M2H8 2515 aa9.14□□□□□ -0.95
ATP2C1-201ENST00000328560 CXCL6P80162 114 aa9.14□□□□□ -0.95
ATP2C1-201ENST00000328560 ETDCA0A1B0GVM5 59 aa9.13□□□□□ -0.95
ATP2C1-201ENST00000328560 DPH3Q96FX2 82 aa9.13□□□□□ -0.95
ATP2C1-201ENST00000328560 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
ATP2C1-201ENST00000328560 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
ATP2C1-201ENST00000328560 Q8N377 158 aa9.12□□□□□ -0.95
ATP2C1-201ENST00000328560 ANK2Q01484 3957 aa9.12□□□□□ -0.95
ATP2C1-201ENST00000328560 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
ATP2C1-201ENST00000328560 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
ATP2C1-201ENST00000328560 PSCAO43653 123 aa9.1□□□□□ -0.95
ATP2C1-201ENST00000328560 TM2D3Q9BRN9 247 aa9.1□□□□□ -0.95
ATP2C1-201ENST00000328560 K7EIL1 84 aa9.1□□□□□ -0.95
ATP2C1-201ENST00000328560 BPY2O14599 106 aa9.09□□□□□ -0.95
ATP2C1-201ENST00000328560 UBE2BP63146 152 aa9.09□□□□□ -0.95
ATP2C1-201ENST00000328560 Q9BRP9 147 aa9.07□□□□□ -0.96
ATP2C1-201ENST00000328560 Q6ZRX8 168 aa9.07□□□□□ -0.96
ATP2C1-201ENST00000328560 V9GYY9 64 aa9.07□□□□□ -0.96
ATP2C1-201ENST00000328560 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
ATP2C1-201ENST00000328560 IGLV1-50A0A075B6I6 118 aa9.06□□□□□ -0.96
ATP2C1-201ENST00000328560 OXTP01178 125 aa9.06□□□□□ -0.96
ATP2C1-201ENST00000328560 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
ATP2C1-201ENST00000328560 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
ATP2C1-201ENST00000328560 FUSP35637 526 aaKnown RBP eCLIP9.05□□□□□ -0.96
ATP2C1-201ENST00000328560 RPS28P62857 69 aaKnown RBP9.04□□□□□ -0.96
ATP2C1-201ENST00000328560 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
ATP2C1-201ENST00000328560 FAM236DA0A1B0GTK5 79 aa9.04□□□□□ -0.96
ATP2C1-201ENST00000328560 FAM236CP0DP71 79 aa9.04□□□□□ -0.96
ATP2C1-201ENST00000328560 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
ATP2C1-201ENST00000328560 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
ATP2C1-201ENST00000328560 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
ATP2C1-201ENST00000328560 F8WEM9 126 aa9.03□□□□□ -0.96
ATP2C1-201ENST00000328560 H7BZZ5 65 aa9.03□□□□□ -0.96
ATP2C1-201ENST00000328560 STAB2Q8WWQ8 2551 aa9.02□□□□□ -0.96
ATP2C1-201ENST00000328560 A0A0U1RQV1 116 aa9.02□□□□□ -0.97
ATP2C1-201ENST00000328560 PRYO14603 147 aa9.02□□□□□ -0.97
ATP2C1-201ENST00000328560 A0A0G2JQZ4 141 aa9.02□□□□□ -0.97
ATP2C1-201ENST00000328560 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
ATP2C1-201ENST00000328560 IGKV4-1P06312 121 aa9.01□□□□□ -0.97
ATP2C1-201ENST00000328560 LINC00336Q6ZUF6 198 aa9.01□□□□□ -0.97
ATP2C1-201ENST00000328560 PRO0628Q9UI54 55 aa9.01□□□□□ -0.97
ATP2C1-201ENST00000328560 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
ATP2C1-201ENST00000328560 BCE1O60756 84 aa9.01□□□□□ -0.97
ATP2C1-201ENST00000328560 IGLV2-33A0A075B6J2 118 aaPredicted RBP9□□□□□ -0.97
ATP2C1-201ENST00000328560 Q5XG85 94 aa9□□□□□ -0.97
ATP2C1-201ENST00000328560 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
ATP2C1-201ENST00000328560 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
ATP2C1-201ENST00000328560 PLA2G2DQ9UNK4 145 aa8.99□□□□□ -0.97
ATP2C1-201ENST00000328560 PRLHP81277 87 aa8.98□□□□□ -0.97
ATP2C1-201ENST00000328560 KLKP1Q107X0 134 aa8.98□□□□□ -0.97
ATP2C1-201ENST00000328560 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
ATP2C1-201ENST00000328560 HIGD2AQ9BW72 106 aa8.97□□□□□ -0.97
ATP2C1-201ENST00000328560 SPRR1AP35321 89 aa8.96□□□□□ -0.97
ATP2C1-201ENST00000328560 TMEM254Q8TBM7 123 aa8.96□□□□□ -0.98
ATP2C1-201ENST00000328560 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
ATP2C1-201ENST00000328560 A0A096LNI7 61 aa8.96□□□□□ -0.98
ATP2C1-201ENST00000328560 KRTAP1-5Q9BYS1 174 aa8.96□□□□□ -0.98
ATP2C1-201ENST00000328560 FAM30AQ9NZY2 134 aa8.95□□□□□ -0.98
ATP2C1-201ENST00000328560 Q8NBF4 154 aa8.95□□□□□ -0.98
ATP2C1-201ENST00000328560 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
ATP2C1-201ENST00000328560 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
ATP2C1-201ENST00000328560 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
ATP2C1-201ENST00000328560 CHTF8P0CG12 524 aa8.92□□□□□ -0.98
ATP2C1-201ENST00000328560 TENM2Q9NT68 2774 aa8.92□□□□□ -0.98
ATP2C1-201ENST00000328560 TNP2Q05952 138 aa8.92□□□□□ -0.98
ATP2C1-201ENST00000328560 LINC00476Q8WZB0 136 aa8.92□□□□□ -0.98
ATP2C1-201ENST00000328560 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
ATP2C1-201ENST00000328560 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
ATP2C1-201ENST00000328560 OCR1Q9BZK8 76 aa8.9□□□□□ -0.99
ATP2C1-201ENST00000328560 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
ATP2C1-201ENST00000328560 K7EQZ3 153 aa8.89□□□□□ -0.99
ATP2C1-201ENST00000328560 PHF5AQ7RTV0 110 aaKnown RBP8.88□□□□□ -0.99
ATP2C1-201ENST00000328560 C16orf90A8MZG2 172 aa8.87□□□□□ -0.99
ATP2C1-201ENST00000328560 NDUFC1O43677 76 aa8.87□□□□□ -0.99
ATP2C1-201ENST00000328560 DSCR10P59022 87 aa8.86□□□□□ -0.99
ATP2C1-201ENST00000328560 BRK1Q8WUW1 75 aa8.86□□□□□ -0.99
ATP2C1-201ENST00000328560 SRRM2Q9UQ35 2752 aaKnown RBP8.86□□□□□ -0.99
ATP2C1-201ENST00000328560 A0A087WSZ3 146 aa8.86□□□□□ -0.99
ATP2C1-201ENST00000328560 IGFL1Q6UW32 110 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms