RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■■■□□ 17.6
SSBP3-201ENST00000326956 FASNP49327 2511 aaKnown RBP9.61□□□□□ -0.87
SSBP3-201ENST00000326956 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
SSBP3-201ENST00000326956 HELZ2Q9BYK8 2649 aaKnown RBP9.6□□□□□ -0.87
SSBP3-201ENST00000326956 PRYO14603 147 aa9.59□□□□□ -0.87
SSBP3-201ENST00000326956 H3BNG1 76 aa9.59□□□□□ -0.87
SSBP3-201ENST00000326956 PRO0628Q9UI54 55 aa9.59□□□□□ -0.87
SSBP3-201ENST00000326956 UNC79Q9P2D8 2635 aa9.58□□□□□ -0.88
SSBP3-201ENST00000326956 Q6ZTC4 211 aa9.58□□□□□ -0.88
SSBP3-201ENST00000326956 KCNQ1DNQ9H478 68 aa9.58□□□□□ -0.88
SSBP3-201ENST00000326956 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-201ENST00000326956 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
SSBP3-201ENST00000326956 OCR1Q9BZK8 76 aa9.58□□□□□ -0.88
SSBP3-201ENST00000326956 Q8N377 158 aa9.57□□□□□ -0.88
SSBP3-201ENST00000326956 RETNQ9HD89 108 aa9.57□□□□□ -0.88
SSBP3-201ENST00000326956 INAFM1C9JVW0 142 aa9.57□□□□□ -0.88
SSBP3-201ENST00000326956 ESRGQ1W209 222 aa9.57□□□□□ -0.88
SSBP3-201ENST00000326956 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
SSBP3-201ENST00000326956 J3QKU1 62 aa9.56□□□□□ -0.88
SSBP3-201ENST00000326956 DHRS4-AS1Q9P1J3 65 aa9.56□□□□□ -0.88
SSBP3-201ENST00000326956 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
SSBP3-201ENST00000326956 ATRQ13535 2644 aa9.56□□□□□ -0.88
SSBP3-201ENST00000326956 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
SSBP3-201ENST00000326956 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
SSBP3-201ENST00000326956 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
SSBP3-201ENST00000326956 RPL37AP8A6NKH3 93 aa9.54□□□□□ -0.88
SSBP3-201ENST00000326956 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
SSBP3-201ENST00000326956 HIGD2AQ9BW72 106 aa9.54□□□□□ -0.88
SSBP3-201ENST00000326956 LINC01556Q5JQF7 62 aa9.53□□□□□ -0.88
SSBP3-201ENST00000326956 C1orf137Q5JT78 98 aa9.53□□□□□ -0.88
SSBP3-201ENST00000326956 FAM30AQ9NZY2 134 aa9.53□□□□□ -0.88
SSBP3-201ENST00000326956 HIVEP1P15822 2718 aa9.52□□□□□ -0.89
SSBP3-201ENST00000326956 A0A1B0GW54 56 aa9.52□□□□□ -0.89
SSBP3-201ENST00000326956 Q6ZRX8 168 aa9.52□□□□□ -0.89
SSBP3-201ENST00000326956 SMIM29Q86T20 159 aa9.52□□□□□ -0.89
SSBP3-201ENST00000326956 MPLKIPQ8TAP9 179 aa9.51□□□□□ -0.89
SSBP3-201ENST00000326956 DEFB131BA0A096LNP1 70 aa9.5□□□□□ -0.89
SSBP3-201ENST00000326956 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
SSBP3-201ENST00000326956 TENM1Q9UKZ4 2725 aa9.48□□□□□ -0.89
SSBP3-201ENST00000326956 UBE2BP63146 152 aa9.48□□□□□ -0.89
SSBP3-201ENST00000326956 Q8NBF4 154 aa9.48□□□□□ -0.89
SSBP3-201ENST00000326956 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
SSBP3-201ENST00000326956 BRK1Q8WUW1 75 aa9.47□□□□□ -0.89
SSBP3-201ENST00000326956 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
SSBP3-201ENST00000326956 Q9BRP9 147 aa9.47□□□□□ -0.89
SSBP3-201ENST00000326956 TEP1Q99973 2627 aaKnown RBP9.47□□□□□ -0.89
SSBP3-201ENST00000326956 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-201ENST00000326956 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
SSBP3-201ENST00000326956 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
SSBP3-201ENST00000326956 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
SSBP3-201ENST00000326956 TLX1NBP0CAT3 122 aa9.45□□□□□ -0.9
SSBP3-201ENST00000326956 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
SSBP3-201ENST00000326956 PLA2G2DQ9UNK4 145 aa9.45□□□□□ -0.9
SSBP3-201ENST00000326956 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
SSBP3-201ENST00000326956 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
SSBP3-201ENST00000326956 PKIGQ9Y2B9 76 aa9.42□□□□□ -0.9
SSBP3-201ENST00000326956 TNP2Q05952 138 aa9.42□□□□□ -0.9
SSBP3-201ENST00000326956 DNAH10OSP0CZ25 163 aa9.42□□□□□ -0.9
SSBP3-201ENST00000326956 NSD1Q96L73 2696 aaPredicted RBP9.41□□□□□ -0.9
SSBP3-201ENST00000326956 KRTAP4-16G5E9R7 235 aaPredicted RBP9.41□□□□□ -0.9
SSBP3-201ENST00000326956 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
SSBP3-201ENST00000326956 SPRR1AP35321 89 aa9.41□□□□□ -0.9
SSBP3-201ENST00000326956 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
SSBP3-201ENST00000326956 IGLV5-37A0A075B6J1 123 aa9.4□□□□□ -0.9
SSBP3-201ENST00000326956 K7EQZ3 153 aa9.4□□□□□ -0.9
SSBP3-201ENST00000326956 DSCR10P59022 87 aa9.39□□□□□ -0.91
SSBP3-201ENST00000326956 KRTAP10-11P60412 298 aa9.39□□□□□ -0.91
SSBP3-201ENST00000326956 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
SSBP3-201ENST00000326956 F8P00451 2351 aa9.39□□□□□ -0.91
SSBP3-201ENST00000326956 PKD1L1Q8TDX9 2849 aa9.37□□□□□ -0.91
SSBP3-201ENST00000326956 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
SSBP3-201ENST00000326956 HCG22E2RYF7 251 aa9.37□□□□□ -0.91
SSBP3-201ENST00000326956 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
SSBP3-201ENST00000326956 CASC10Q5T4H9 136 aa9.36□□□□□ -0.91
SSBP3-201ENST00000326956 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
SSBP3-201ENST00000326956 LINC00476Q8WZB0 136 aa9.36□□□□□ -0.91
SSBP3-201ENST00000326956 LCE6AA0A183 80 aa9.35□□□□□ -0.91
SSBP3-201ENST00000326956 TRRAPQ9Y4A5 3859 aa9.35□□□□□ -0.91
SSBP3-201ENST00000326956 PSCAO43653 123 aa9.35□□□□□ -0.91
SSBP3-201ENST00000326956 hDV103S1A0JD37 113 aa9.34□□□□□ -0.91
SSBP3-201ENST00000326956 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-201ENST00000326956 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
SSBP3-201ENST00000326956 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
SSBP3-201ENST00000326956 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
SSBP3-201ENST00000326956 C1orf64Q8NEQ6 169 aa9.32□□□□□ -0.92
SSBP3-201ENST00000326956 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
SSBP3-201ENST00000326956 PRR4Q16378 134 aa9.32□□□□□ -0.92
SSBP3-201ENST00000326956 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
SSBP3-201ENST00000326956 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
SSBP3-201ENST00000326956 MP68P56378 58 aa9.31□□□□□ -0.92
SSBP3-201ENST00000326956 TENM3Q9P273 2699 aa9.3□□□□□ -0.92
SSBP3-201ENST00000326956 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
SSBP3-201ENST00000326956 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
SSBP3-201ENST00000326956 A0A087WSZ3 146 aa9.29□□□□□ -0.92
SSBP3-201ENST00000326956 NDUFB1O75438 58 aa9.29□□□□□ -0.92
SSBP3-201ENST00000326956 IGKV2-24A0A0C4DH68 120 aa9.28□□□□□ -0.92
SSBP3-201ENST00000326956 PRLHP81277 87 aa9.28□□□□□ -0.92
SSBP3-201ENST00000326956 UBE2AP49459 152 aa9.25□□□□□ -0.93
SSBP3-201ENST00000326956 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-201ENST00000326956 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms