RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PRR4Q16378 134 aa9.47□□□□□ -0.89
CHRNA3-201ENST00000326828 IGKV4-1P06312 121 aa9.46□□□□□ -0.89
CHRNA3-201ENST00000326828 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.89
CHRNA3-201ENST00000326828 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.89
CHRNA3-201ENST00000326828 BCE1O60756 84 aa9.46□□□□□ -0.9
CHRNA3-201ENST00000326828 PRYO14603 147 aa9.45□□□□□ -0.9
CHRNA3-201ENST00000326828 FUSP35637 526 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHRNA3-201ENST00000326828 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
CHRNA3-201ENST00000326828 M0R378 163 aa9.44□□□□□ -0.9
CHRNA3-201ENST00000326828 IGKV2D-24A0A075B6R9 120 aa9.44□□□□□ -0.9
CHRNA3-201ENST00000326828 NDUFC1O43677 76 aa9.44□□□□□ -0.9
CHRNA3-201ENST00000326828 SMIM29Q86T20 159 aa9.44□□□□□ -0.9
CHRNA3-201ENST00000326828 PRR34Q9NV39 138 aa9.44□□□□□ -0.9
CHRNA3-201ENST00000326828 Q6ZRP5 223 aa9.43□□□□□ -0.9
CHRNA3-201ENST00000326828 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
CHRNA3-201ENST00000326828 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
CHRNA3-201ENST00000326828 Q8NAQ8 132 aa9.43□□□□□ -0.9
CHRNA3-201ENST00000326828 APOC4P55056 127 aa9.43□□□□□ -0.9
CHRNA3-201ENST00000326828 RETNQ9HD89 108 aa9.43□□□□□ -0.9
CHRNA3-201ENST00000326828 ANK3Q12955 4377 aaKnown RBP9.42□□□□□ -0.9
CHRNA3-201ENST00000326828 TENM3Q9P273 2699 aa9.42□□□□□ -0.9
CHRNA3-201ENST00000326828 NKAPP1Q8N9T2 125 aa9.42□□□□□ -0.9
CHRNA3-201ENST00000326828 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
CHRNA3-201ENST00000326828 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
CHRNA3-201ENST00000326828 OCR1Q9BZK8 76 aa9.4□□□□□ -0.91
CHRNA3-201ENST00000326828 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
CHRNA3-201ENST00000326828 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
CHRNA3-201ENST00000326828 H3BQ85 93 aa9.39□□□□□ -0.91
CHRNA3-201ENST00000326828 DEFB116Q30KQ4 102 aa9.39□□□□□ -0.91
CHRNA3-201ENST00000326828 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
CHRNA3-201ENST00000326828 ST20-AS1Q8NBB2 130 aa9.39□□□□□ -0.91
CHRNA3-201ENST00000326828 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
CHRNA3-201ENST00000326828 KPRPQ5T749 579 aaPredicted RBP9.38□□□□□ -0.91
CHRNA3-201ENST00000326828 Q8N377 158 aa9.38□□□□□ -0.91
CHRNA3-201ENST00000326828 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
CHRNA3-201ENST00000326828 MAST4O15021 2626 aa9.37□□□□□ -0.91
CHRNA3-201ENST00000326828 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
CHRNA3-201ENST00000326828 ESRGQ1W209 222 aa9.36□□□□□ -0.91
CHRNA3-201ENST00000326828 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
CHRNA3-201ENST00000326828 FBN1P35555 2871 aaKnown RBP9.35□□□□□ -0.91
CHRNA3-201ENST00000326828 Q6ZTC4 211 aa9.34□□□□□ -0.91
CHRNA3-201ENST00000326828 ATP5EP56381 51 aaPredicted RBP9.33□□□□□ -0.92
CHRNA3-201ENST00000326828 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
CHRNA3-201ENST00000326828 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
CHRNA3-201ENST00000326828 NSD1Q96L73 2696 aaPredicted RBP9.33□□□□□ -0.92
CHRNA3-201ENST00000326828 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
CHRNA3-201ENST00000326828 STAB1Q9NY15 2570 aa9.32□□□□□ -0.92
CHRNA3-201ENST00000326828 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
CHRNA3-201ENST00000326828 PSPHP1O15172 72 aa9.32□□□□□ -0.92
CHRNA3-201ENST00000326828 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
CHRNA3-201ENST00000326828 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
CHRNA3-201ENST00000326828 K7EQZ3 153 aa9.3□□□□□ -0.92
CHRNA3-201ENST00000326828 UBE2BP63146 152 aa9.3□□□□□ -0.92
CHRNA3-201ENST00000326828 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
CHRNA3-201ENST00000326828 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
CHRNA3-201ENST00000326828 Q9BRP9 147 aa9.28□□□□□ -0.92
CHRNA3-201ENST00000326828 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
CHRNA3-201ENST00000326828 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
CHRNA3-201ENST00000326828 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
CHRNA3-201ENST00000326828 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
CHRNA3-201ENST00000326828 INAFM1C9JVW0 142 aa9.26□□□□□ -0.93
CHRNA3-201ENST00000326828 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
CHRNA3-201ENST00000326828 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
CHRNA3-201ENST00000326828 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
CHRNA3-201ENST00000326828 Q6ZRX8 168 aa9.24□□□□□ -0.93
CHRNA3-201ENST00000326828 DSCR10P59022 87 aa9.23□□□□□ -0.93
CHRNA3-201ENST00000326828 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
CHRNA3-201ENST00000326828 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
CHRNA3-201ENST00000326828 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.22□□□□□ -0.93
CHRNA3-201ENST00000326828 Q8NBF4 154 aa9.22□□□□□ -0.93
CHRNA3-201ENST00000326828 hDV103S1A0JD37 113 aa9.21□□□□□ -0.93
CHRNA3-201ENST00000326828 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.94
CHRNA3-201ENST00000326828 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
CHRNA3-201ENST00000326828 DEFB131BA0A096LNP1 70 aa9.19□□□□□ -0.94
CHRNA3-201ENST00000326828 V9GYY9 64 aa9.19□□□□□ -0.94
CHRNA3-201ENST00000326828 PSCAO43653 123 aa9.18□□□□□ -0.94
CHRNA3-201ENST00000326828 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
CHRNA3-201ENST00000326828 A0A096LNI7 61 aa9.17□□□□□ -0.94
CHRNA3-201ENST00000326828 PRLHP81277 87 aa9.17□□□□□ -0.94
CHRNA3-201ENST00000326828 A0A087WSZ3 146 aa9.17□□□□□ -0.94
CHRNA3-201ENST00000326828 LINC00476Q8WZB0 136 aa9.17□□□□□ -0.94
CHRNA3-201ENST00000326828 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
CHRNA3-201ENST00000326828 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
CHRNA3-201ENST00000326828 LINC00208Q96KT6 92 aa9.16□□□□□ -0.94
CHRNA3-201ENST00000326828 COL7A1Q02388 2944 aa9.15□□□□□ -0.94
CHRNA3-201ENST00000326828 A8MU10 97 aa9.14□□□□□ -0.95
CHRNA3-201ENST00000326828 A8MUN3 132 aa9.14□□□□□ -0.95
CHRNA3-201ENST00000326828 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
CHRNA3-201ENST00000326828 TRAV22A0A0B4J277 110 aa9.14□□□□□ -0.95
CHRNA3-201ENST00000326828 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
CHRNA3-201ENST00000326828 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
CHRNA3-201ENST00000326828 TNP2Q05952 138 aa9.12□□□□□ -0.95
CHRNA3-201ENST00000326828 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
CHRNA3-201ENST00000326828 J3QKU1 62 aa9.12□□□□□ -0.95
CHRNA3-201ENST00000326828 ANK2Q01484 3957 aa9.12□□□□□ -0.95
CHRNA3-201ENST00000326828 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
CHRNA3-201ENST00000326828 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
CHRNA3-201ENST00000326828 MP68P56378 58 aa9.1□□□□□ -0.95
CHRNA3-201ENST00000326828 KRTAP10-11P60412 298 aa9.1□□□□□ -0.95
CHRNA3-201ENST00000326828 SEC61GP60059 68 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms