RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
LIN28A-202ENST00000326279 A0A087WVE0 104 aa8.67□□□□□ -1.02
LIN28A-202ENST00000326279 CDK2AP2O75956 126 aa8.67□□□□□ -1.02
LIN28A-202ENST00000326279 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.67□□□□□ -1.02
LIN28A-202ENST00000326279 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
LIN28A-202ENST00000326279 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.02
LIN28A-202ENST00000326279 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
LIN28A-202ENST00000326279 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
LIN28A-202ENST00000326279 BPY2O14599 106 aa8.64□□□□□ -1.03
LIN28A-202ENST00000326279 REG3GQ6UW15 175 aa8.64□□□□□ -1.03
LIN28A-202ENST00000326279 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
LIN28A-202ENST00000326279 DHRS4-AS1Q9P1J3 65 aa8.64□□□□□ -1.03
LIN28A-202ENST00000326279 KRTAP1-5Q9BYS1 174 aa8.64□□□□□ -1.03
LIN28A-202ENST00000326279 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
LIN28A-202ENST00000326279 PDE6GP18545 87 aa8.63□□□□□ -1.03
LIN28A-202ENST00000326279 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
LIN28A-202ENST00000326279 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
LIN28A-202ENST00000326279 VPREB1P12018 145 aa8.63□□□□□ -1.03
LIN28A-202ENST00000326279 RTL8CO15255 209 aa8.62□□□□□ -1.03
LIN28A-202ENST00000326279 H3BQ85 93 aa8.62□□□□□ -1.03
LIN28A-202ENST00000326279 C1orf137Q5JT78 98 aa8.62□□□□□ -1.03
LIN28A-202ENST00000326279 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
LIN28A-202ENST00000326279 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
LIN28A-202ENST00000326279 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
LIN28A-202ENST00000326279 ST20-AS1Q8NBB2 130 aa8.59□□□□□ -1.03
LIN28A-202ENST00000326279 AKAP9Q99996 3911 aa8.59□□□□□ -1.03
LIN28A-202ENST00000326279 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
LIN28A-202ENST00000326279 H0Y9J4 135 aa8.59□□□□□ -1.03
LIN28A-202ENST00000326279 TNP2Q05952 138 aa8.58□□□□□ -1.04
LIN28A-202ENST00000326279 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
LIN28A-202ENST00000326279 ATOX1O00244 68 aa8.57□□□□□ -1.04
LIN28A-202ENST00000326279 SMR3BP02814 79 aaPredicted RBP8.57□□□□□ -1.04
LIN28A-202ENST00000326279 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
LIN28A-202ENST00000326279 NDUFS5O43920 106 aa8.57□□□□□ -1.04
LIN28A-202ENST00000326279 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
LIN28A-202ENST00000326279 Q8NDZ9 215 aa8.56□□□□□ -1.04
LIN28A-202ENST00000326279 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
LIN28A-202ENST00000326279 A0A087WTM6 91 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 Q8N9L7 120 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 SMCR5Q8TEV8 140 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 LINC00476Q8WZB0 136 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 C20orf197Q8N268 126 aa8.55□□□□□ -1.04
LIN28A-202ENST00000326279 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
LIN28A-202ENST00000326279 F8WDY8 70 aa8.54□□□□□ -1.04
LIN28A-202ENST00000326279 PRYO14603 147 aa8.54□□□□□ -1.04
LIN28A-202ENST00000326279 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
LIN28A-202ENST00000326279 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
LIN28A-202ENST00000326279 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
LIN28A-202ENST00000326279 Q9BRP9 147 aa8.52□□□□□ -1.05
LIN28A-202ENST00000326279 WFDC13Q8IUB5 93 aa8.51□□□□□ -1.05
LIN28A-202ENST00000326279 Q6ZVQ6 151 aa8.51□□□□□ -1.05
LIN28A-202ENST00000326279 A0A087WSZ3 146 aa8.51□□□□□ -1.05
LIN28A-202ENST00000326279 A0A0G2JQZ4 141 aa8.51□□□□□ -1.05
LIN28A-202ENST00000326279 A0A1W2PNN7 141 aa8.51□□□□□ -1.05
LIN28A-202ENST00000326279 Q6ZRX8 168 aa8.5□□□□□ -1.05
LIN28A-202ENST00000326279 NDUFB1O75438 58 aa8.49□□□□□ -1.05
LIN28A-202ENST00000326279 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
LIN28A-202ENST00000326279 Q6JHZ5 121 aa8.48□□□□□ -1.05
LIN28A-202ENST00000326279 IMUPQ9GZP8 106 aa8.47□□□□□ -1.05
LIN28A-202ENST00000326279 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.05
LIN28A-202ENST00000326279 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.05
LIN28A-202ENST00000326279 SNURFQ9Y675 71 aa8.46□□□□□ -1.05
LIN28A-202ENST00000326279 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
LIN28A-202ENST00000326279 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
LIN28A-202ENST00000326279 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
LIN28A-202ENST00000326279 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
LIN28A-202ENST00000326279 LINC01547P58512 204 aaPredicted RBP8.45□□□□□ -1.06
LIN28A-202ENST00000326279 C9orf163Q8N9P6 203 aa8.45□□□□□ -1.06
LIN28A-202ENST00000326279 SMIM20Q8N5G0 67 aa8.45□□□□□ -1.06
LIN28A-202ENST00000326279 Q6ZQT0 140 aa8.44□□□□□ -1.06
LIN28A-202ENST00000326279 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
LIN28A-202ENST00000326279 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
LIN28A-202ENST00000326279 UQCRQO14949 82 aa8.42□□□□□ -1.06
LIN28A-202ENST00000326279 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
LIN28A-202ENST00000326279 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
LIN28A-202ENST00000326279 Q6Q795 121 aa8.41□□□□□ -1.06
LIN28A-202ENST00000326279 FAM30AQ9NZY2 134 aa8.4□□□□□ -1.06
LIN28A-202ENST00000326279 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
LIN28A-202ENST00000326279 SERP2Q8N6R1 65 aa8.4□□□□□ -1.07
LIN28A-202ENST00000326279 TRBV7-6A0A0J9YX20 115 aa8.39□□□□□ -1.07
LIN28A-202ENST00000326279 Q8N377 158 aa8.39□□□□□ -1.07
LIN28A-202ENST00000326279 COX7CP15954 63 aa8.37□□□□□ -1.07
LIN28A-202ENST00000326279 PRR4Q16378 134 aa8.37□□□□□ -1.07
LIN28A-202ENST00000326279 TRBV7-7A0A0K0K1E9 115 aa8.37□□□□□ -1.07
LIN28A-202ENST00000326279 TLX1NBP0CAT3 122 aa8.36□□□□□ -1.07
LIN28A-202ENST00000326279 MOBPQ13875 183 aa8.36□□□□□ -1.07
LIN28A-202ENST00000326279 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
LIN28A-202ENST00000326279 MEGF8Q7Z7M0 2845 aa8.35□□□□□ -1.07
LIN28A-202ENST00000326279 MP68P56378 58 aa8.35□□□□□ -1.07
LIN28A-202ENST00000326279 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
LIN28A-202ENST00000326279 SVIPQ8NHG7 77 aa8.34□□□□□ -1.07
LIN28A-202ENST00000326279 IGKV4-1P06312 121 aa8.34□□□□□ -1.07
LIN28A-202ENST00000326279 PANO1I0J062 215 aa8.32□□□□□ -1.08
LIN28A-202ENST00000326279 Q8NBF4 154 aa8.32□□□□□ -1.08
LIN28A-202ENST00000326279 LOC110117498A0A087WWA1 95 aa8.32□□□□□ -1.08
LIN28A-202ENST00000326279 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
LIN28A-202ENST00000326279 BCE1O60756 84 aa8.31□□□□□ -1.08
LIN28A-202ENST00000326279 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms