RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 A0A087WVE0 104 aa13.85□□□□□ -0.19
LIMS2-201ENST00000324938 FAM168BA1KXE4 195 aa13.83□□□□□ -0.2
LIMS2-201ENST00000324938 PRYO14603 147 aa13.82□□□□□ -0.2
LIMS2-201ENST00000324938 LOC107984640A0A0U1RRK4 108 aa13.81□□□□□ -0.2
LIMS2-201ENST00000324938 C3orf22Q8N5N4 141 aa13.81□□□□□ -0.2
LIMS2-201ENST00000324938 IGLV1-50A0A075B6I6 118 aa13.81□□□□□ -0.2
LIMS2-201ENST00000324938 UQCRQO14949 82 aa13.81□□□□□ -0.2
LIMS2-201ENST00000324938 KRTAP7-1Q8IUC3 87 aa13.81□□□□□ -0.2
LIMS2-201ENST00000324938 COL7A1Q02388 2944 aa13.8□□□□□ -0.2
LIMS2-201ENST00000324938 KRTAP1-5Q9BYS1 174 aa13.79□□□□□ -0.2
LIMS2-201ENST00000324938 KRTAP4-16G5E9R7 235 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-201ENST00000324938 STAB2Q8WWQ8 2551 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 RPL37AP8A6NKH3 93 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 SPRR1AP35321 89 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 Q6ZVQ6 151 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 SS18L2Q9UHA2 77 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 COX7CP15954 63 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 Q6ZRX8 168 aa13.78□□□□□ -0.2
LIMS2-201ENST00000324938 DNAH9Q9NYC9 4486 aa13.77□□□□□ -0.21
LIMS2-201ENST00000324938 DHRS4-AS1Q9P1J3 65 aa13.76□□□□□ -0.21
LIMS2-201ENST00000324938 APLNQ9ULZ1 77 aa13.76□□□□□ -0.21
LIMS2-201ENST00000324938 FAM19A1Q7Z5A9 133 aa13.75□□□□□ -0.21
LIMS2-201ENST00000324938 MRPL55Q7Z7F7 128 aaKnown RBP13.75□□□□□ -0.21
LIMS2-201ENST00000324938 LINC01547P58512 204 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-201ENST00000324938 FAM19A5Q7Z5A7 132 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-201ENST00000324938 C9orf153Q5TBE3 101 aa13.73□□□□□ -0.21
LIMS2-201ENST00000324938 B9D2Q9BPU9 175 aa13.73□□□□□ -0.21
LIMS2-201ENST00000324938 ETDCA0A1B0GVM5 59 aa13.73□□□□□ -0.21
LIMS2-201ENST00000324938 UBE2DNLQ8IWF7 75 aa13.73□□□□□ -0.21
LIMS2-201ENST00000324938 Q9BRP9 147 aa13.73□□□□□ -0.21
LIMS2-201ENST00000324938 Q8N377 158 aa13.72□□□□□ -0.21
LIMS2-201ENST00000324938 MDFIQ99750 246 aa13.72□□□□□ -0.21
LIMS2-201ENST00000324938 DYNC2H1Q8NCM8 4307 aaKnown RBP13.7□□□□□ -0.22
LIMS2-201ENST00000324938 CNBPP62633 177 aaKnown RBP13.7□□□□□ -0.22
LIMS2-201ENST00000324938 HAMPP81172 84 aa13.7□□□□□ -0.22
LIMS2-201ENST00000324938 CXCL6P80162 114 aa13.7□□□□□ -0.22
LIMS2-201ENST00000324938 SERP2Q8N6R1 65 aa13.7□□□□□ -0.22
LIMS2-201ENST00000324938 DEFB105AQ8NG35 78 aa13.69□□□□□ -0.22
LIMS2-201ENST00000324938 PSCAO43653 123 aa13.68□□□□□ -0.22
LIMS2-201ENST00000324938 LYSTQ99698 3801 aa13.68□□□□□ -0.22
LIMS2-201ENST00000324938 IGLV5-48A0A075B6I7 105 aa13.66□□□□□ -0.22
LIMS2-201ENST00000324938 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
LIMS2-201ENST00000324938 CRYGAP11844 174 aa13.66□□□□□ -0.22
LIMS2-201ENST00000324938 A0A096LNI7 61 aa13.65□□□□□ -0.22
LIMS2-201ENST00000324938 DNAH10Q8IVF4 4471 aa13.65□□□□□ -0.22
LIMS2-201ENST00000324938 REG3GQ6UW15 175 aa13.63□□□□□ -0.23
LIMS2-201ENST00000324938 C14orf177Q52M58 125 aa13.62□□□□□ -0.23
LIMS2-201ENST00000324938 ST20-AS1Q8NBB2 130 aa13.61□□□□□ -0.23
LIMS2-201ENST00000324938 TNP2Q05952 138 aa13.6□□□□□ -0.23
LIMS2-201ENST00000324938 IGKV2-24A0A0C4DH68 120 aa13.59□□□□□ -0.23
LIMS2-201ENST00000324938 ERC2-IT1O76042 136 aa13.59□□□□□ -0.23
LIMS2-201ENST00000324938 UBE2BP63146 152 aa13.59□□□□□ -0.23
LIMS2-201ENST00000324938 BCE1O60756 84 aa13.57□□□□□ -0.24
LIMS2-201ENST00000324938 A0A1W2PNN7 141 aa13.57□□□□□ -0.24
LIMS2-201ENST00000324938 NUPR2A6NF83 97 aa13.57□□□□□ -0.24
LIMS2-201ENST00000324938 SCXQ7RTU7 201 aa13.57□□□□□ -0.24
LIMS2-201ENST00000324938 CSMD3Q7Z407 3707 aa13.56□□□□□ -0.24
LIMS2-201ENST00000324938 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-201ENST00000324938 A0A1B0GW54 56 aa13.54□□□□□ -0.24
LIMS2-201ENST00000324938 NBDYA0A0U1RRE5 68 aa13.53□□□□□ -0.24
LIMS2-201ENST00000324938 NREPQ16612 68 aa13.53□□□□□ -0.24
LIMS2-201ENST00000324938 C3orf84H3BNL1 204 aa13.52□□□□□ -0.24
LIMS2-201ENST00000324938 C1orf137Q5JT78 98 aa13.52□□□□□ -0.24
LIMS2-201ENST00000324938 DNAH7Q8WXX0 4024 aa13.52□□□□□ -0.25
LIMS2-201ENST00000324938 FUSP35637 526 aaKnown RBP eCLIP13.52□□□□□ -0.25
LIMS2-201ENST00000324938 LRCOL1A6NCL2 159 aa13.51□□□□□ -0.25
LIMS2-201ENST00000324938 CYSTM1Q9H1C7 97 aa13.51□□□□□ -0.25
LIMS2-201ENST00000324938 A0A1W2PNM2 257 aa13.51□□□□□ -0.25
LIMS2-201ENST00000324938 PLECQ15149 4684 aaKnown RBP13.49□□□□□ -0.25
LIMS2-201ENST00000324938 Q8NBF4 154 aa13.49□□□□□ -0.25
LIMS2-201ENST00000324938 TENM2Q9NT68 2774 aa13.48□□□□□ -0.25
LIMS2-201ENST00000324938 SMIM20Q8N5G0 67 aa13.48□□□□□ -0.25
LIMS2-201ENST00000324938 C9orf163Q8N9P6 203 aa13.48□□□□□ -0.25
LIMS2-201ENST00000324938 CHTF8P0CG12 524 aa13.48□□□□□ -0.25
LIMS2-201ENST00000324938 SMIM29Q86T20 159 aa13.48□□□□□ -0.25
LIMS2-201ENST00000324938 TRAV7A0A075B6U4 112 aa13.47□□□□□ -0.25
LIMS2-201ENST00000324938 Q6ZRN7 208 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-201ENST00000324938 PRLHP81277 87 aa13.46□□□□□ -0.25
LIMS2-201ENST00000324938 PKIGQ9Y2B9 76 aa13.46□□□□□ -0.25
LIMS2-201ENST00000324938 SPRR4Q96PI1 79 aa13.45□□□□□ -0.26
LIMS2-201ENST00000324938 BPY2O14599 106 aa13.44□□□□□ -0.26
LIMS2-201ENST00000324938 IGKV4-1P06312 121 aa13.44□□□□□ -0.26
LIMS2-201ENST00000324938 PHF5AQ7RTV0 110 aaKnown RBP13.43□□□□□ -0.26
LIMS2-201ENST00000324938 Q8N9L7 120 aa13.42□□□□□ -0.26
LIMS2-201ENST00000324938 F8WEM9 126 aa13.41□□□□□ -0.26
LIMS2-201ENST00000324938 KRTAP11-1Q8IUC1 163 aa13.41□□□□□ -0.26
LIMS2-201ENST00000324938 TMEM258P61165 79 aa13.4□□□□□ -0.26
LIMS2-201ENST00000324938 LINC00476Q8WZB0 136 aa13.4□□□□□ -0.26
LIMS2-201ENST00000324938 HIGD2AQ9BW72 106 aa13.4□□□□□ -0.26
LIMS2-201ENST00000324938 H0Y9J4 135 aa13.39□□□□□ -0.27
LIMS2-201ENST00000324938 LINC00474Q9P2X8 69 aa13.39□□□□□ -0.27
LIMS2-201ENST00000324938 C20orf197Q8N268 126 aa13.38□□□□□ -0.27
LIMS2-201ENST00000324938 VPS13DQ5THJ4 4388 aa13.37□□□□□ -0.27
LIMS2-201ENST00000324938 IGLV8-61A0A075B6I0 122 aa13.36□□□□□ -0.27
LIMS2-201ENST00000324938 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
LIMS2-201ENST00000324938 EPM2AB3EWF7 344 aa13.34□□□□□ -0.27
LIMS2-201ENST00000324938 IGFL1Q6UW32 110 aa13.34□□□□□ -0.27
LIMS2-201ENST00000324938 PRKDCP78527 4128 aaKnown RBP13.34□□□□□ -0.27
LIMS2-201ENST00000324938 PANO1I0J062 215 aa13.31□□□□□ -0.28
LIMS2-201ENST00000324938 SPRR1BP22528 89 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms