RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ATP11AUNQ6ZP68 121 aa7.01□□□□□ -1.29
SF3B2-201ENST00000322535 K7EQD1 137 aa7.01□□□□□ -1.29
SF3B2-201ENST00000322535 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
SF3B2-201ENST00000322535 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
SF3B2-201ENST00000322535 TRGV1A0A0A0MS02 117 aa7□□□□□ -1.29
SF3B2-201ENST00000322535 CXCL6P80162 114 aa7□□□□□ -1.29
SF3B2-201ENST00000322535 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
SF3B2-201ENST00000322535 Q6ZQY7 126 aa6.99□□□□□ -1.29
SF3B2-201ENST00000322535 LINC00167Q96N53 147 aa6.99□□□□□ -1.29
SF3B2-201ENST00000322535 OXLD1Q5BKU9 147 aa6.98□□□□□ -1.29
SF3B2-201ENST00000322535 IGLV1-51P01701 117 aa6.98□□□□□ -1.29
SF3B2-201ENST00000322535 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
SF3B2-201ENST00000322535 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
SF3B2-201ENST00000322535 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
SF3B2-201ENST00000322535 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
SF3B2-201ENST00000322535 C9orf116Q5BN46 136 aaPredicted RBP6.96□□□□□ -1.3
SF3B2-201ENST00000322535 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
SF3B2-201ENST00000322535 LOC110117498A0A087WWA1 95 aa6.96□□□□□ -1.3
SF3B2-201ENST00000322535 LOC100131303A0A0U1RQF7 123 aa6.96□□□□□ -1.3
SF3B2-201ENST00000322535 VPREB1P12018 145 aa6.95□□□□□ -1.3
SF3B2-201ENST00000322535 TRBV6-8A0A0A6YYG3 113 aa6.95□□□□□ -1.3
SF3B2-201ENST00000322535 LINC00575Q6W349 94 aa6.95□□□□□ -1.3
SF3B2-201ENST00000322535 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
SF3B2-201ENST00000322535 CMYA5Q8N3K9 4069 aa6.94□□□□□ -1.3
SF3B2-201ENST00000322535 DEFB4AO15263 64 aa6.94□□□□□ -1.3
SF3B2-201ENST00000322535 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
SF3B2-201ENST00000322535 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
SF3B2-201ENST00000322535 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
SF3B2-201ENST00000322535 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
SF3B2-201ENST00000322535 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
SF3B2-201ENST00000322535 LINC00313P59037 77 aa6.93□□□□□ -1.3
SF3B2-201ENST00000322535 A6NED7 52 aa6.92□□□□□ -1.3
SF3B2-201ENST00000322535 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
SF3B2-201ENST00000322535 SERTAD4-AS1Q5TG53 156 aa6.92□□□□□ -1.3
SF3B2-201ENST00000322535 IGHV4-28A0A0C4DH34 117 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 MOBPQ13875 183 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 Q8NDZ9 215 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 SMIM29Q86T20 159 aa6.91□□□□□ -1.3
SF3B2-201ENST00000322535 INSP01308 110 aa6.9□□□□□ -1.3
SF3B2-201ENST00000322535 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
SF3B2-201ENST00000322535 TRGV2A0A075B6R0 118 aa6.9□□□□□ -1.3
SF3B2-201ENST00000322535 KLK12Q9UKR0 248 aa6.9□□□□□ -1.3
SF3B2-201ENST00000322535 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.31
SF3B2-201ENST00000322535 DEFB135Q30KP9 77 aa6.89□□□□□ -1.31
SF3B2-201ENST00000322535 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
SF3B2-201ENST00000322535 PDE6GP18545 87 aa6.88□□□□□ -1.31
SF3B2-201ENST00000322535 C9orf66Q5T8R8 295 aa6.88□□□□□ -1.31
SF3B2-201ENST00000322535 IGLV10-54A0A075B6I4 117 aa6.87□□□□□ -1.31
SF3B2-201ENST00000322535 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
SF3B2-201ENST00000322535 DEFB130BP0DP73 79 aa6.87□□□□□ -1.31
SF3B2-201ENST00000322535 DEFB130AP0DP74 79 aa6.87□□□□□ -1.31
SF3B2-201ENST00000322535 KRTAP10-11P60412 298 aa6.87□□□□□ -1.31
SF3B2-201ENST00000322535 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
SF3B2-201ENST00000322535 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
SF3B2-201ENST00000322535 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
SF3B2-201ENST00000322535 TRGV4A0A0C4DH28 118 aa6.85□□□□□ -1.31
SF3B2-201ENST00000322535 CSNK1G2-AS1Q8NCQ2 148 aa6.84□□□□□ -1.31
SF3B2-201ENST00000322535 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
SF3B2-201ENST00000322535 IGHV4-30-4P0DP06 118 aa6.84□□□□□ -1.31
SF3B2-201ENST00000322535 A0A096LPF7 62 aa6.83□□□□□ -1.32
SF3B2-201ENST00000322535 Q75L30 129 aa6.83□□□□□ -1.32
SF3B2-201ENST00000322535 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
SF3B2-201ENST00000322535 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
SF3B2-201ENST00000322535 COX7BP24311 80 aa6.82□□□□□ -1.32
SF3B2-201ENST00000322535 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
SF3B2-201ENST00000322535 LCE6AA0A183 80 aa6.82□□□□□ -1.32
SF3B2-201ENST00000322535 ST20-AS1Q8NBB2 130 aa6.81□□□□□ -1.32
SF3B2-201ENST00000322535 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
SF3B2-201ENST00000322535 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.81□□□□□ -1.32
SF3B2-201ENST00000322535 Q8IZM0 81 aa6.81□□□□□ -1.32
SF3B2-201ENST00000322535 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
SF3B2-201ENST00000322535 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
SF3B2-201ENST00000322535 HTN3P15516 51 aa6.8□□□□□ -1.32
SF3B2-201ENST00000322535 X6R8D5 127 aa6.79□□□□□ -1.32
SF3B2-201ENST00000322535 STAB2Q8WWQ8 2551 aa6.78□□□□□ -1.32
SF3B2-201ENST00000322535 CMC4P56277 68 aaPredicted RBP6.78□□□□□ -1.32
SF3B2-201ENST00000322535 UNQ6190/PRO20217Q6UXQ8 127 aa6.78□□□□□ -1.32
SF3B2-201ENST00000322535 MP68P56378 58 aa6.78□□□□□ -1.32
SF3B2-201ENST00000322535 B9D2Q9BPU9 175 aa6.78□□□□□ -1.32
SF3B2-201ENST00000322535 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
SF3B2-201ENST00000322535 C16orf74Q96GX8 76 aa6.77□□□□□ -1.33
SF3B2-201ENST00000322535 ZNF706Q9Y5V0 76 aaPredicted RBP6.77□□□□□ -1.33
SF3B2-201ENST00000322535 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
SF3B2-201ENST00000322535 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
SF3B2-201ENST00000322535 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
SF3B2-201ENST00000322535 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
SF3B2-201ENST00000322535 KIAA0087Q14695 138 aa6.75□□□□□ -1.33
SF3B2-201ENST00000322535 LYSTQ99698 3801 aa6.74□□□□□ -1.33
SF3B2-201ENST00000322535 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
SF3B2-201ENST00000322535 SPINK7P58062 85 aa6.74□□□□□ -1.33
SF3B2-201ENST00000322535 COX17Q14061 63 aa6.73□□□□□ -1.33
SF3B2-201ENST00000322535 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-201ENST00000322535 DNAH3Q8TD57 4116 aa6.73□□□□□ -1.33
SF3B2-201ENST00000322535 ANGP03950 147 aaKnown RBP6.72□□□□□ -1.33
SF3B2-201ENST00000322535 Q8NAQ8 132 aa6.72□□□□□ -1.33
SF3B2-201ENST00000322535 K7EQZ3 153 aa6.71□□□□□ -1.33
SF3B2-201ENST00000322535 WFDC13Q8IUB5 93 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms