RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 BRK1Q8WUW1 75 aa11.86□□□□□ -0.51
PRKCB-202ENST00000321728 PKIGQ9Y2B9 76 aa11.86□□□□□ -0.51
PRKCB-202ENST00000321728 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
PRKCB-202ENST00000321728 OCR1Q9BZK8 76 aa11.85□□□□□ -0.51
PRKCB-202ENST00000321728 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.51
PRKCB-202ENST00000321728 A0A0U1RQV1 116 aa11.83□□□□□ -0.52
PRKCB-202ENST00000321728 FUSP35637 526 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■□□□□ 11
PRKCB-202ENST00000321728 HIGD2AQ9BW72 106 aa11.82□□□□□ -0.52
PRKCB-202ENST00000321728 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
PRKCB-202ENST00000321728 APOC4P55056 127 aa11.82□□□□□ -0.52
PRKCB-202ENST00000321728 Q6ZRU5 148 aa11.82□□□□□ -0.52
PRKCB-202ENST00000321728 EGFEM1PQ0D2K5 195 aa11.81□□□□□ -0.52
PRKCB-202ENST00000321728 Q8NAQ8 132 aa11.81□□□□□ -0.52
PRKCB-202ENST00000321728 ESRGQ1W209 222 aa11.77□□□□□ -0.53
PRKCB-202ENST00000321728 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.53
PRKCB-202ENST00000321728 FAM30AQ9NZY2 134 aa11.76□□□□□ -0.53
PRKCB-202ENST00000321728 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
PRKCB-202ENST00000321728 Q6ZTC4 211 aa11.75□□□□□ -0.53
PRKCB-202ENST00000321728 Q6ZRP5 223 aa11.74□□□□□ -0.53
PRKCB-202ENST00000321728 SMIM29Q86T20 159 aa11.74□□□□□ -0.53
PRKCB-202ENST00000321728 KPRPQ5T749 579 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-202ENST00000321728 Q8N377 158 aa11.73□□□□□ -0.53
PRKCB-202ENST00000321728 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
PRKCB-202ENST00000321728 NKAPP1Q8N9T2 125 aa11.72□□□□□ -0.53
PRKCB-202ENST00000321728 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
PRKCB-202ENST00000321728 IGLV5-48A0A075B6I7 105 aa11.69□□□□□ -0.54
PRKCB-202ENST00000321728 TENM3Q9P273 2699 aa11.69□□□□□ -0.54
PRKCB-202ENST00000321728 INAFM1C9JVW0 142 aa11.68□□□□□ -0.54
PRKCB-202ENST00000321728 KCNQ1DNQ9H478 68 aa11.68□□□□□ -0.54
PRKCB-202ENST00000321728 RETNQ9HD89 108 aa11.67□□□□□ -0.54
PRKCB-202ENST00000321728 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
PRKCB-202ENST00000321728 SERTAD4-AS1Q5TG53 156 aa11.66□□□□□ -0.54
PRKCB-202ENST00000321728 C7orf33Q8WU49 177 aa11.66□□□□□ -0.54
PRKCB-202ENST00000321728 A0A1W2PNM2 257 aa11.66□□□□□ -0.54
PRKCB-202ENST00000321728 IGKV2D-24A0A075B6R9 120 aa11.64□□□□□ -0.55
PRKCB-202ENST00000321728 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
PRKCB-202ENST00000321728 C1orf137Q5JT78 98 aa11.64□□□□□ -0.55
PRKCB-202ENST00000321728 C1orf195Q5TG92 126 aa11.64□□□□□ -0.55
PRKCB-202ENST00000321728 RPL37AP8A6NKH3 93 aa11.63□□□□□ -0.55
PRKCB-202ENST00000321728 hDV103S1A0JD37 113 aa11.62□□□□□ -0.55
PRKCB-202ENST00000321728 DHRS4-AS1Q9P1J3 65 aa11.62□□□□□ -0.55
PRKCB-202ENST00000321728 Q6ZRX8 168 aa11.6□□□□□ -0.55
PRKCB-202ENST00000321728 ST20-AS1Q8NBB2 130 aa11.6□□□□□ -0.55
PRKCB-202ENST00000321728 A0A1B0GW54 56 aa11.6□□□□□ -0.55
PRKCB-202ENST00000321728 Q8NBF4 154 aa11.59□□□□□ -0.55
PRKCB-202ENST00000321728 C1orf64Q8NEQ6 169 aa11.59□□□□□ -0.55
PRKCB-202ENST00000321728 Q9BRP9 147 aa11.59□□□□□ -0.55
PRKCB-202ENST00000321728 LCE6AA0A183 80 aa11.59□□□□□ -0.55
PRKCB-202ENST00000321728 ETDCA0A1B0GVM5 59 aa11.58□□□□□ -0.56
PRKCB-202ENST00000321728 K7EQZ3 153 aa11.58□□□□□ -0.56
PRKCB-202ENST00000321728 DSCR10P59022 87 aa11.57□□□□□ -0.56
PRKCB-202ENST00000321728 ANK2Q01484 3957 aa11.57□□□□□ -0.56
PRKCB-202ENST00000321728 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
PRKCB-202ENST00000321728 BAHCC1Q9P281 2608 aa11.56□□□□□ -0.56
PRKCB-202ENST00000321728 NOTCH1P46531 2555 aa11.56□□□□□ -0.56
PRKCB-202ENST00000321728 TNP2Q05952 138 aa11.55□□□□□ -0.56
PRKCB-202ENST00000321728 STAB1Q9NY15 2570 aa11.55□□□□□ -0.56
PRKCB-202ENST00000321728 F8P00451 2351 aa11.55□□□□□ -0.56
PRKCB-202ENST00000321728 FAM168BA1KXE4 195 aa11.55□□□□□ -0.56
PRKCB-202ENST00000321728 PRR4Q16378 134 aa11.55□□□□□ -0.56
PRKCB-202ENST00000321728 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
PRKCB-202ENST00000321728 J3QKU1 62 aa11.54□□□□□ -0.56
PRKCB-202ENST00000321728 ZCCHC13Q8WW36 166 aaKnown RBP11.53□□□□□ -0.56
PRKCB-202ENST00000321728 MAST4O15021 2626 aa11.53□□□□□ -0.56
PRKCB-202ENST00000321728 F8WDY8 70 aa11.53□□□□□ -0.56
PRKCB-202ENST00000321728 OXLD1Q5BKU9 147 aa11.53□□□□□ -0.56
PRKCB-202ENST00000321728 V9GYY9 64 aa11.53□□□□□ -0.56
PRKCB-202ENST00000321728 H3BNG1 76 aa11.53□□□□□ -0.56
PRKCB-202ENST00000321728 SPRR4Q96PI1 79 aa11.53□□□□□ -0.56
PRKCB-202ENST00000321728 FBN1P35555 2871 aaKnown RBP11.52□□□□□ -0.56
PRKCB-202ENST00000321728 KRTAP4-16G5E9R7 235 aaPredicted RBP11.52□□□□□ -0.57
PRKCB-202ENST00000321728 IGLV1-50A0A075B6I6 118 aa11.51□□□□□ -0.57
PRKCB-202ENST00000321728 Q1T7F1 81 aa11.51□□□□□ -0.57
PRKCB-202ENST00000321728 HCG22E2RYF7 251 aa11.5□□□□□ -0.57
PRKCB-202ENST00000321728 PSPHP1O15172 72 aa11.5□□□□□ -0.57
PRKCB-202ENST00000321728 UBE2BP63146 152 aa11.5□□□□□ -0.57
PRKCB-202ENST00000321728 LINC01556Q5JQF7 62 aa11.49□□□□□ -0.57
PRKCB-202ENST00000321728 PRB2P02812 416 aaPredicted RBP11.49□□□□□ -0.57
PRKCB-202ENST00000321728 SPRR1AP35321 89 aa11.47□□□□□ -0.57
PRKCB-202ENST00000321728 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
PRKCB-202ENST00000321728 A0A0G2JQZ4 141 aa11.46□□□□□ -0.57
PRKCB-202ENST00000321728 A0A1W2PNN7 141 aa11.46□□□□□ -0.57
PRKCB-202ENST00000321728 PLA2G2DQ9UNK4 145 aa11.46□□□□□ -0.57
PRKCB-202ENST00000321728 PSCAO43653 123 aa11.46□□□□□ -0.58
PRKCB-202ENST00000321728 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
PRKCB-202ENST00000321728 KMT2BQ9UMN6 2715 aaPredicted RBP11.44□□□□□ -0.58
PRKCB-202ENST00000321728 WFDC13Q8IUB5 93 aa11.44□□□□□ -0.58
PRKCB-202ENST00000321728 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
PRKCB-202ENST00000321728 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
PRKCB-202ENST00000321728 TRAV22A0A0B4J277 110 aa11.43□□□□□ -0.58
PRKCB-202ENST00000321728 CYP4F30PQ9H0H9 118 aa11.43□□□□□ -0.58
PRKCB-202ENST00000321728 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
PRKCB-202ENST00000321728 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
PRKCB-202ENST00000321728 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
PRKCB-202ENST00000321728 KRTAP10-11P60412 298 aa11.42□□□□□ -0.58
PRKCB-202ENST00000321728 NDUFB1O75438 58 aa11.41□□□□□ -0.58
PRKCB-202ENST00000321728 MP68P56378 58 aa11.4□□□□□ -0.58
PRKCB-202ENST00000321728 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.59
PRKCB-202ENST00000321728 SEC61GP60059 68 aa11.39□□□□□ -0.59
PRKCB-202ENST00000321728 CASC10Q5T4H9 136 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms