RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 TRAV10A0A0B4J240 114 aa12.43□□□□□ -0.42
HCCS-201ENST00000321143 USP17L23D6RBM5 183 aa12.43□□□□□ -0.42
HCCS-201ENST00000321143 LINC00528Q8N1L1 170 aa12.42□□□□□ -0.42
HCCS-201ENST00000321143 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
HCCS-201ENST00000321143 FAM19A1Q7Z5A9 133 aa12.4□□□□□ -0.42
HCCS-201ENST00000321143 TGP01266 2768 aa12.39□□□□□ -0.43
HCCS-201ENST00000321143 TRBV7-4A0A0J9YYF1 115 aa12.38□□□□□ -0.43
HCCS-201ENST00000321143 NKAPP1Q8N9T2 125 aa12.38□□□□□ -0.43
HCCS-201ENST00000321143 SERP2Q8N6R1 65 aa12.37□□□□□ -0.43
HCCS-201ENST00000321143 CRYGAP11844 174 aa12.37□□□□□ -0.43
HCCS-201ENST00000321143 SERTAD4-AS1Q5TG53 156 aa12.37□□□□□ -0.43
HCCS-201ENST00000321143 Q6ZVQ6 151 aa12.36□□□□□ -0.43
HCCS-201ENST00000321143 TLX1NBP0CAT3 122 aa12.36□□□□□ -0.43
HCCS-201ENST00000321143 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
HCCS-201ENST00000321143 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
HCCS-201ENST00000321143 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
HCCS-201ENST00000321143 FBN3Q75N90 2809 aa12.35□□□□□ -0.43
HCCS-201ENST00000321143 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
HCCS-201ENST00000321143 LINC01547P58512 204 aaPredicted RBP12.34□□□□□ -0.43
HCCS-201ENST00000321143 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
HCCS-201ENST00000321143 HAMPP81172 84 aa12.33□□□□□ -0.44
HCCS-201ENST00000321143 PLA2G2DQ9UNK4 145 aa12.32□□□□□ -0.44
HCCS-201ENST00000321143 DNAH7Q8WXX0 4024 aa12.31□□□□□ -0.44
HCCS-201ENST00000321143 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
HCCS-201ENST00000321143 RMI2Q96E14 147 aa12.3□□□□□ -0.44
HCCS-201ENST00000321143 PLECQ15149 4684 aaKnown RBP12.3□□□□□ -0.44
HCCS-201ENST00000321143 DNAH1Q9P2D7 4330 aa12.29□□□□□ -0.44
HCCS-201ENST00000321143 SMIM20Q8N5G0 67 aa12.28□□□□□ -0.44
HCCS-201ENST00000321143 STARD9Q9P2P6 4700 aa12.28□□□□□ -0.44
HCCS-201ENST00000321143 CXCL6P80162 114 aa12.27□□□□□ -0.44
HCCS-201ENST00000321143 FAM168BA1KXE4 195 aa12.27□□□□□ -0.45
HCCS-201ENST00000321143 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
HCCS-201ENST00000321143 CYSTM1Q9H1C7 97 aa12.26□□□□□ -0.45
HCCS-201ENST00000321143 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
HCCS-201ENST00000321143 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
HCCS-201ENST00000321143 DYNC2H1Q8NCM8 4307 aaKnown RBP12.24□□□□□ -0.45
HCCS-201ENST00000321143 IGLV1-50A0A075B6I6 118 aa12.23□□□□□ -0.45
HCCS-201ENST00000321143 PRYO14603 147 aa12.23□□□□□ -0.45
HCCS-201ENST00000321143 Q8N377 158 aa12.23□□□□□ -0.45
HCCS-201ENST00000321143 Q6ZRX8 168 aa12.22□□□□□ -0.45
HCCS-201ENST00000321143 DHRS4-AS1Q9P1J3 65 aa12.22□□□□□ -0.45
HCCS-201ENST00000321143 KRTAP4-16G5E9R7 235 aaPredicted RBP12.22□□□□□ -0.45
HCCS-201ENST00000321143 KRTAP7-1Q8IUC3 87 aa12.22□□□□□ -0.45
HCCS-201ENST00000321143 SPRR1AP35321 89 aa12.21□□□□□ -0.46
HCCS-201ENST00000321143 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
HCCS-201ENST00000321143 ETDCA0A1B0GVM5 59 aa12.2□□□□□ -0.46
HCCS-201ENST00000321143 BCE1O60756 84 aa12.2□□□□□ -0.46
HCCS-201ENST00000321143 SCXQ7RTU7 201 aa12.2□□□□□ -0.46
HCCS-201ENST00000321143 Q9BRP9 147 aa12.2□□□□□ -0.46
HCCS-201ENST00000321143 FAM19A5Q7Z5A7 132 aaPredicted RBP12.18□□□□□ -0.46
HCCS-201ENST00000321143 MRPL55Q7Z7F7 128 aaKnown RBP12.18□□□□□ -0.46
HCCS-201ENST00000321143 IGLV5-48A0A075B6I7 105 aa12.16□□□□□ -0.46
HCCS-201ENST00000321143 TMEM258P61165 79 aa12.15□□□□□ -0.46
HCCS-201ENST00000321143 DNAH10Q8IVF4 4471 aa12.15□□□□□ -0.46
HCCS-201ENST00000321143 TRAV7A0A075B6U4 112 aa12.14□□□□□ -0.47
HCCS-201ENST00000321143 NREPQ16612 68 aa12.13□□□□□ -0.47
HCCS-201ENST00000321143 ST20-AS1Q8NBB2 130 aa12.12□□□□□ -0.47
HCCS-201ENST00000321143 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
HCCS-201ENST00000321143 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
HCCS-201ENST00000321143 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
HCCS-201ENST00000321143 ERC2-IT1O76042 136 aa12.09□□□□□ -0.47
HCCS-201ENST00000321143 UBE2BP63146 152 aa12.09□□□□□ -0.47
HCCS-201ENST00000321143 REG3GQ6UW15 175 aa12.09□□□□□ -0.47
HCCS-201ENST00000321143 TNP2Q05952 138 aa12.08□□□□□ -0.48
HCCS-201ENST00000321143 APLNQ9ULZ1 77 aa12.08□□□□□ -0.48
HCCS-201ENST00000321143 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
HCCS-201ENST00000321143 J3KT08 172 aa12.07□□□□□ -0.48
HCCS-201ENST00000321143 C1orf137Q5JT78 98 aa12.06□□□□□ -0.48
HCCS-201ENST00000321143 Q8N9L7 120 aa12.06□□□□□ -0.48
HCCS-201ENST00000321143 A0A096LNI7 61 aa12.06□□□□□ -0.48
HCCS-201ENST00000321143 PSCAO43653 123 aa12.06□□□□□ -0.48
HCCS-201ENST00000321143 A0A1W2PNM2 257 aa12.05□□□□□ -0.48
HCCS-201ENST00000321143 BPY2O14599 106 aa12.05□□□□□ -0.48
HCCS-201ENST00000321143 UBE2DNLQ8IWF7 75 aa12.05□□□□□ -0.48
HCCS-201ENST00000321143 A0A1B0GW54 56 aa12.04□□□□□ -0.48
HCCS-201ENST00000321143 C16orf90A8MZG2 172 aa12.04□□□□□ -0.48
HCCS-201ENST00000321143 IGKV4-1P06312 121 aa12.04□□□□□ -0.48
HCCS-201ENST00000321143 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
HCCS-201ENST00000321143 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
HCCS-201ENST00000321143 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
HCCS-201ENST00000321143 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
HCCS-201ENST00000321143 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
HCCS-201ENST00000321143 VPS13DQ5THJ4 4388 aa12.02□□□□□ -0.49
HCCS-201ENST00000321143 Q8NBF4 154 aa12.02□□□□□ -0.49
HCCS-201ENST00000321143 A0A1W2PNN7 141 aa12□□□□□ -0.49
HCCS-201ENST00000321143 KLKP1Q107X0 134 aa11.99□□□□□ -0.49
HCCS-201ENST00000321143 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.98□□□□□ -0.49
HCCS-201ENST00000321143 SMIM29Q86T20 159 aa11.98□□□□□ -0.49
HCCS-201ENST00000321143 SPRR4Q96PI1 79 aa11.98□□□□□ -0.49
HCCS-201ENST00000321143 C14orf177Q52M58 125 aa11.97□□□□□ -0.49
HCCS-201ENST00000321143 H7BZZ5 65 aa11.96□□□□□ -0.49
HCCS-201ENST00000321143 SNURFQ9Y675 71 aa11.96□□□□□ -0.49
HCCS-201ENST00000321143 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
HCCS-201ENST00000321143 PRLHP81277 87 aa11.95□□□□□ -0.5
HCCS-201ENST00000321143 F8WEM9 126 aa11.94□□□□□ -0.5
HCCS-201ENST00000321143 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
HCCS-201ENST00000321143 FAM236DA0A1B0GTK5 79 aa11.91□□□□□ -0.5
HCCS-201ENST00000321143 FAM236CP0DP71 79 aa11.91□□□□□ -0.5
HCCS-201ENST00000321143 CHTF8P0CG12 524 aa11.9□□□□□ -0.5
HCCS-201ENST00000321143 HIGD2AQ9BW72 106 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms