RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
CLK4-201ENST00000316308 C3orf22Q8N5N4 141 aa9.52□□□□□ -0.89
CLK4-201ENST00000316308 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
CLK4-201ENST00000316308 CYSTM1Q9H1C7 97 aa9.52□□□□□ -0.89
CLK4-201ENST00000316308 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
CLK4-201ENST00000316308 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.51□□□□□ -0.89
CLK4-201ENST00000316308 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
CLK4-201ENST00000316308 STARD9Q9P2P6 4700 aa9.51□□□□□ -0.89
CLK4-201ENST00000316308 LOC110117498A0A087WWA1 95 aa9.51□□□□□ -0.89
CLK4-201ENST00000316308 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
CLK4-201ENST00000316308 KCNQ1DNQ9H478 68 aa9.5□□□□□ -0.89
CLK4-201ENST00000316308 SCXQ7RTU7 201 aa9.49□□□□□ -0.89
CLK4-201ENST00000316308 Q9BRP9 147 aa9.49□□□□□ -0.89
CLK4-201ENST00000316308 TRBV7-4A0A0J9YYF1 115 aa9.48□□□□□ -0.89
CLK4-201ENST00000316308 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
CLK4-201ENST00000316308 Q6ZVQ6 151 aa9.48□□□□□ -0.89
CLK4-201ENST00000316308 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
CLK4-201ENST00000316308 TLX1NBP0CAT3 122 aa9.47□□□□□ -0.89
CLK4-201ENST00000316308 HAMPP81172 84 aa9.47□□□□□ -0.89
CLK4-201ENST00000316308 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
CLK4-201ENST00000316308 Q8N377 158 aa9.46□□□□□ -0.9
CLK4-201ENST00000316308 DNHD1Q96M86 4753 aa9.45□□□□□ -0.9
CLK4-201ENST00000316308 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
CLK4-201ENST00000316308 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
CLK4-201ENST00000316308 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
CLK4-201ENST00000316308 LINC01547P58512 204 aaPredicted RBP9.45□□□□□ -0.9
CLK4-201ENST00000316308 UPK3BQ9BT76 320 aa9.45□□□□□ -0.9
CLK4-201ENST00000316308 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.44□□□□□ -0.9
CLK4-201ENST00000316308 IGKV2-24A0A0C4DH68 120 aa9.44□□□□□ -0.9
CLK4-201ENST00000316308 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
CLK4-201ENST00000316308 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
CLK4-201ENST00000316308 F8WDY8 70 aa9.43□□□□□ -0.9
CLK4-201ENST00000316308 COX7CP15954 63 aa9.43□□□□□ -0.9
CLK4-201ENST00000316308 A0A096LNI7 61 aa9.42□□□□□ -0.9
CLK4-201ENST00000316308 ATOX1O00244 68 aa9.42□□□□□ -0.9
CLK4-201ENST00000316308 Q6ZRX8 168 aa9.42□□□□□ -0.9
CLK4-201ENST00000316308 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
CLK4-201ENST00000316308 UQCRQO14949 82 aa9.41□□□□□ -0.9
CLK4-201ENST00000316308 C3orf84H3BNL1 204 aa9.41□□□□□ -0.9
CLK4-201ENST00000316308 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
CLK4-201ENST00000316308 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
CLK4-201ENST00000316308 A0A0G2JQZ4 141 aa9.4□□□□□ -0.9
CLK4-201ENST00000316308 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
CLK4-201ENST00000316308 Q8N9L7 120 aa9.4□□□□□ -0.9
CLK4-201ENST00000316308 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
CLK4-201ENST00000316308 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
CLK4-201ENST00000316308 SPRR1AP35321 89 aa9.39□□□□□ -0.91
CLK4-201ENST00000316308 RMI2Q96E14 147 aa9.39□□□□□ -0.91
CLK4-201ENST00000316308 GHRHP01286 108 aa9.38□□□□□ -0.91
CLK4-201ENST00000316308 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
CLK4-201ENST00000316308 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
CLK4-201ENST00000316308 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
CLK4-201ENST00000316308 LOC107984640A0A0U1RRK4 108 aa9.37□□□□□ -0.91
CLK4-201ENST00000316308 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
CLK4-201ENST00000316308 PSCAO43653 123 aa9.37□□□□□ -0.91
CLK4-201ENST00000316308 ATP5EP2Q5VTU8 51 aa9.37□□□□□ -0.91
CLK4-201ENST00000316308 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLK4-201ENST00000316308 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
CLK4-201ENST00000316308 DNAH2Q9P225 4427 aa9.35□□□□□ -0.91
CLK4-201ENST00000316308 PDE6GP18545 87 aa9.35□□□□□ -0.91
CLK4-201ENST00000316308 TGP01266 2768 aa9.35□□□□□ -0.91
CLK4-201ENST00000316308 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
CLK4-201ENST00000316308 PRLHP81277 87 aa9.35□□□□□ -0.91
CLK4-201ENST00000316308 PRYO14603 147 aa9.34□□□□□ -0.91
CLK4-201ENST00000316308 UBE2BP63146 152 aa9.34□□□□□ -0.91
CLK4-201ENST00000316308 H3BQ85 93 aa9.33□□□□□ -0.92
CLK4-201ENST00000316308 SMIM20Q8N5G0 67 aa9.33□□□□□ -0.92
CLK4-201ENST00000316308 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
CLK4-201ENST00000316308 CRYGAP11844 174 aa9.32□□□□□ -0.92
CLK4-201ENST00000316308 HECTD4Q9Y4D8 3996 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 PANO1I0J062 215 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 DHRS4-AS1Q9P1J3 65 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 FRAS1Q86XX4 4008 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 IGLV5-48A0A075B6I7 105 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 BPY2O14599 106 aa9.31□□□□□ -0.92
CLK4-201ENST00000316308 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
CLK4-201ENST00000316308 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
CLK4-201ENST00000316308 TNP2Q05952 138 aa9.3□□□□□ -0.92
CLK4-201ENST00000316308 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
CLK4-201ENST00000316308 CXCL6P80162 114 aa9.28□□□□□ -0.92
CLK4-201ENST00000316308 SMIM29Q86T20 159 aa9.28□□□□□ -0.92
CLK4-201ENST00000316308 C1orf137Q5JT78 98 aa9.27□□□□□ -0.92
CLK4-201ENST00000316308 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
CLK4-201ENST00000316308 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
CLK4-201ENST00000316308 NREPQ16612 68 aa9.26□□□□□ -0.93
CLK4-201ENST00000316308 C20orf197Q8N268 126 aa9.26□□□□□ -0.93
CLK4-201ENST00000316308 NBDYA0A0U1RRE5 68 aa9.24□□□□□ -0.93
CLK4-201ENST00000316308 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
CLK4-201ENST00000316308 FBN3Q75N90 2809 aa9.24□□□□□ -0.93
CLK4-201ENST00000316308 Q6ZRN7 208 aaPredicted RBP9.23□□□□□ -0.93
CLK4-201ENST00000316308 SNURFQ9Y675 71 aa9.21□□□□□ -0.93
CLK4-201ENST00000316308 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.94
CLK4-201ENST00000316308 DEFB116Q30KQ4 102 aa9.2□□□□□ -0.94
CLK4-201ENST00000316308 Q8NBF4 154 aa9.2□□□□□ -0.94
CLK4-201ENST00000316308 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
CLK4-201ENST00000316308 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
CLK4-201ENST00000316308 DNAH6Q9C0G6 4158 aa9.19□□□□□ -0.94
CLK4-201ENST00000316308 EPM2AB3EWF7 344 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 281.5 ms