RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 FSHBP01225 129 aa8.83□□□□□ -1
SNED1-201ENST00000310397 LINC01600Q96MT4 127 aa8.82□□□□□ -1
SNED1-201ENST00000310397 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
SNED1-201ENST00000310397 SPINT4Q6UDR6 99 aa8.81□□□□□ -1
SNED1-201ENST00000310397 MAP1AP78559 2803 aaPredicted RBP8.8□□□□□ -1
SNED1-201ENST00000310397 PRR34Q9NV39 138 aa8.8□□□□□ -1
SNED1-201ENST00000310397 COA5Q86WW8 74 aa8.8□□□□□ -1
SNED1-201ENST00000310397 RPL37AP61513 92 aaKnown RBP8.79□□□□□ -1
SNED1-201ENST00000310397 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
SNED1-201ENST00000310397 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
SNED1-201ENST00000310397 A8MUN3 132 aa8.78□□□□□ -1
SNED1-201ENST00000310397 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
SNED1-201ENST00000310397 MDFIQ99750 246 aa8.77□□□□□ -1.01
SNED1-201ENST00000310397 IGLV1-50A0A075B6I6 118 aa8.77□□□□□ -1.01
SNED1-201ENST00000310397 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
SNED1-201ENST00000310397 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
SNED1-201ENST00000310397 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
SNED1-201ENST00000310397 MGAQ8IWI9 3026 aa8.76□□□□□ -1.01
SNED1-201ENST00000310397 RANBP2P49792 3224 aaKnown RBP8.76□□□□□ -1.01
SNED1-201ENST00000310397 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
SNED1-201ENST00000310397 Q8N377 158 aa8.75□□□□□ -1.01
SNED1-201ENST00000310397 PLA2G1BP04054 148 aaKnown RBP8.74□□□□□ -1.01
SNED1-201ENST00000310397 HELZ2Q9BYK8 2649 aaKnown RBP8.74□□□□□ -1.01
SNED1-201ENST00000310397 GCN1Q92616 2671 aaKnown RBP8.74□□□□□ -1.01
SNED1-201ENST00000310397 OBSCN-AS1Q96MR7 158 aa8.74□□□□□ -1.01
SNED1-201ENST00000310397 UQCR11O14957 56 aa8.73□□□□□ -1.01
SNED1-201ENST00000310397 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
SNED1-201ENST00000310397 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SNED1-201ENST00000310397 CD164Q04900 197 aa8.72□□□□□ -1.01
SNED1-201ENST00000310397 IGFL1Q6UW32 110 aa8.72□□□□□ -1.01
SNED1-201ENST00000310397 SPANXA2-OT1Q8N9U9 137 aa8.71□□□□□ -1.01
SNED1-201ENST00000310397 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.01
SNED1-201ENST00000310397 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.02
SNED1-201ENST00000310397 HTTP42858 3142 aa8.7□□□□□ -1.02
SNED1-201ENST00000310397 NBDYA0A0U1RRE5 68 aa8.7□□□□□ -1.02
SNED1-201ENST00000310397 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
SNED1-201ENST00000310397 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
SNED1-201ENST00000310397 TRIOO75962 3097 aa8.69□□□□□ -1.02
SNED1-201ENST00000310397 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
SNED1-201ENST00000310397 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
SNED1-201ENST00000310397 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
SNED1-201ENST00000310397 TEX15Q9BXT5 2789 aa8.68□□□□□ -1.02
SNED1-201ENST00000310397 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
SNED1-201ENST00000310397 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
SNED1-201ENST00000310397 C9orf129Q5T035 196 aaKnown RBP8.68□□□□□ -1.02
SNED1-201ENST00000310397 KTN1-AS1Q86SY8 53 aa8.67□□□□□ -1.02
SNED1-201ENST00000310397 LAMA3Q16787 3333 aa8.67□□□□□ -1.02
SNED1-201ENST00000310397 RTL8CO15255 209 aa8.67□□□□□ -1.02
SNED1-201ENST00000310397 FRYQ5TBA9 3013 aa8.67□□□□□ -1.02
SNED1-201ENST00000310397 ZNF575Q86XF7 245 aa8.66□□□□□ -1.02
SNED1-201ENST00000310397 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
SNED1-201ENST00000310397 WIPF1O43516 503 aa8.65□□□□□ -1.02
SNED1-201ENST00000310397 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.03
SNED1-201ENST00000310397 NOTCH1P46531 2555 aa8.65□□□□□ -1.03
SNED1-201ENST00000310397 A0A1B0GVX0 72 aa8.65□□□□□ -1.03
SNED1-201ENST00000310397 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.03
SNED1-201ENST00000310397 UNC79Q9P2D8 2635 aa8.64□□□□□ -1.03
SNED1-201ENST00000310397 C19orf73Q9NVV2 129 aa8.64□□□□□ -1.03
SNED1-201ENST00000310397 PRUNE2Q8WUY3 3088 aa8.63□□□□□ -1.03
SNED1-201ENST00000310397 WDFY4Q6ZS81 3184 aa8.62□□□□□ -1.03
SNED1-201ENST00000310397 XIRP2A4UGR9 3374 aa8.62□□□□□ -1.03
SNED1-201ENST00000310397 MIR22HGQ0VDD5 57 aa8.62□□□□□ -1.03
SNED1-201ENST00000310397 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
SNED1-201ENST00000310397 ZNF292O60281 2723 aa8.6□□□□□ -1.03
SNED1-201ENST00000310397 Q1T7F1 81 aa8.6□□□□□ -1.03
SNED1-201ENST00000310397 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
SNED1-201ENST00000310397 Q96NJ1 140 aa8.6□□□□□ -1.03
SNED1-201ENST00000310397 BRCA2P51587 3418 aa8.6□□□□□ -1.03
SNED1-201ENST00000310397 A0A096LNT2 108 aa8.58□□□□□ -1.04
SNED1-201ENST00000310397 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
SNED1-201ENST00000310397 ZNF861PO60384 105 aa8.57□□□□□ -1.04
SNED1-201ENST00000310397 LCA10Q71F78 164 aa8.56□□□□□ -1.04
SNED1-201ENST00000310397 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
SNED1-201ENST00000310397 CELSR3Q9NYQ7 3312 aa8.55□□□□□ -1.04
SNED1-201ENST00000310397 CDC42SE1Q9NRR8 79 aa8.54□□□□□ -1.04
SNED1-201ENST00000310397 FREM2Q5SZK8 3169 aa8.54□□□□□ -1.04
SNED1-201ENST00000310397 KRTAP24-1Q3LI83 254 aa8.53□□□□□ -1.04
SNED1-201ENST00000310397 IGLV5-37A0A075B6J1 123 aa8.52□□□□□ -1.04
SNED1-201ENST00000310397 SPRR4Q96PI1 79 aa8.52□□□□□ -1.04
SNED1-201ENST00000310397 CRIPTQ9P021 101 aa8.52□□□□□ -1.05
SNED1-201ENST00000310397 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.05
SNED1-201ENST00000310397 COL6A5A8TX70 2615 aa8.5□□□□□ -1.05
SNED1-201ENST00000310397 CNBPP62633 177 aaKnown RBP8.5□□□□□ -1.05
SNED1-201ENST00000310397 KALRNO60229 2985 aa8.49□□□□□ -1.05
SNED1-201ENST00000310397 DSCR10P59022 87 aa8.48□□□□□ -1.05
SNED1-201ENST00000310397 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
SNED1-201ENST00000310397 LAMA1P25391 3075 aa8.47□□□□□ -1.05
SNED1-201ENST00000310397 NBEAL2Q6ZNJ1 2754 aa8.46□□□□□ -1.05
SNED1-201ENST00000310397 NBEAQ8NFP9 2946 aa8.46□□□□□ -1.06
SNED1-201ENST00000310397 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
SNED1-201ENST00000310397 A0A1W2PNN7 141 aa8.45□□□□□ -1.06
SNED1-201ENST00000310397 KRTAP10-11P60412 298 aa8.45□□□□□ -1.06
SNED1-201ENST00000310397 KMT2BQ9UMN6 2715 aaPredicted RBP8.44□□□□□ -1.06
SNED1-201ENST00000310397 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
SNED1-201ENST00000310397 DNAH14Q0VDD8 3507 aa8.44□□□□□ -1.06
SNED1-201ENST00000310397 APLNQ9ULZ1 77 aa8.42□□□□□ -1.06
SNED1-201ENST00000310397 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
SNED1-201ENST00000310397 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
SNED1-201ENST00000310397 Q75L30 129 aa8.41□□□□□ -1.06
SNED1-201ENST00000310397 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms