RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 LAMA1P25391 3075 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 WIPF1O43516 503 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 PRLHP81277 87 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 C19orf73Q9NVV2 129 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 C9orf163Q8N9P6 203 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 CDIP1Q9H305 208 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 SPACA4Q8TDM5 124 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
CLOCK-201ENST00000309964 C1orf195Q5TG92 126 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 IGLV6-57P01721 117 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 PRO0628Q9UI54 55 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 IGSF10Q6WRI0 2623 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 TRBV7-7A0A0K0K1E9 115 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 C6orf48Q9UBA6 75 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 SCXQ7RTU7 201 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 CSNK1G2-AS1Q8NCQ2 148 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 BOD1L1Q8NFC6 3051 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 CNBPP62633 177 aaKnown RBP2.17□□□□□ -2.06
CLOCK-201ENST00000309964 PSORS1C2Q9UIG4 136 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 FLNCQ14315 2725 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 A0A1B0GU69 56 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 MPLKIPQ8TAP9 179 aa2.17□□□□□ -2.06
CLOCK-201ENST00000309964 KCNQ1DNQ9H478 68 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 C1orf64Q8NEQ6 169 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 A8MWP4 228 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 EPM2AB3EWF7 344 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 ERC2-IT1O76042 136 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 LINC00304Q8N9R0 145 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 IGLV1-50A0A075B6I6 118 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 A0A087WYN8 130 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 LINC00476Q8WZB0 136 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 CD164Q04900 197 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 KIAA0087Q14695 138 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 ADAMTSL4-AS1Q5T5F5 129 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 IGKV2D-30A0A075B6S6 120 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 PRM2P04554 102 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 IGKV2-30P06310 120 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 CHD9Q3L8U1 2897 aa2.16□□□□□ -2.06
CLOCK-201ENST00000309964 K7EIL1 84 aa2.15□□□□□ -2.06
CLOCK-201ENST00000309964 XGP55808 180 aa2.15□□□□□ -2.06
CLOCK-201ENST00000309964 COL6A3P12111 3177 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 MT-ATP8P03928 68 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 Q6ZQT0 140 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 APCP25054 2843 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 A0A087WTM6 91 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 CYP4F30PQ9H0H9 118 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 DNAH14Q0VDD8 3507 aa2.15□□□□□ -2.07
CLOCK-201ENST00000309964 UBR5O95071 2799 aaPredicted RBP2.15□□□□□ -2.07
CLOCK-201ENST00000309964 PRR3P79522 188 aaKnown RBP2.14□□□□□ -2.07
CLOCK-201ENST00000309964 LINC00612Q8N6U2 182 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
CLOCK-201ENST00000309964 SNURFQ9Y675 71 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 A0A096LNT2 108 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 COL12A1Q99715 3063 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 ITPR1Q14643 2758 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 A8MUN3 132 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
CLOCK-201ENST00000309964 ADGRG4Q8IZF6 3080 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 A0A096LNJ9 63 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 FAM229BQ4G0N7 80 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 ZNF575Q86XF7 245 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 URB1-AS1Q96HZ7 61 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 GAS8-AS1O95177 125 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 PHF5AQ7RTV0 110 aaKnown RBP2.13□□□□□ -2.07
CLOCK-201ENST00000309964 ST20-AS1Q8NBB2 130 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 Q96NJ1 140 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 TSPEAR-AS2P59090 65 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 LINC00846Q9NV44 126 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 SZT2Q5T011 3432 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 PRR4Q16378 134 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 RETNLBQ9BQ08 111 aa2.13□□□□□ -2.07
CLOCK-201ENST00000309964 ZZEF1O43149 2961 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 KRTAP21-3Q3LHN1 58 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 UQCR11O14957 56 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 IGLV7-43P04211 117 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 NBEAQ8NFP9 2946 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 DMXL2Q8TDJ6 3036 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 LINC00528Q8N1L1 170 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 ZFHX3Q15911 3703 aa2.12□□□□□ -2.07
CLOCK-201ENST00000309964 IGLV5-37A0A075B6J1 123 aa2.11□□□□□ -2.07
CLOCK-201ENST00000309964 EYSQ5T1H1 3165 aa2.11□□□□□ -2.07
CLOCK-201ENST00000309964 KALRNO60229 2985 aa2.11□□□□□ -2.07
CLOCK-201ENST00000309964 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
CLOCK-201ENST00000309964 PRR15Q8IV56 129 aa2.11□□□□□ -2.07
CLOCK-201ENST00000309964 APLNQ9ULZ1 77 aa2.11□□□□□ -2.07
CLOCK-201ENST00000309964 ASH1LQ9NR48 2969 aaKnown RBP2.1□□□□□ -2.07
CLOCK-201ENST00000309964 PCOTHQ58A44 107 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 CRYBG3Q68DQ2 2970 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 SPANXA2-OT1Q8N9U9 137 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 LINC00310P59036 64 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 CASC10Q5T4H9 136 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 SMIM29Q86T20 159 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 C15orf56Q8N910 161 aa2.1□□□□□ -2.07
CLOCK-201ENST00000309964 NIPBLQ6KC79 2804 aaeCLIP2.09□□□□□ -2.07
CLOCK-201ENST00000309964 KRTAP10-11P60412 298 aa2.09□□□□□ -2.07
CLOCK-201ENST00000309964 TNP2Q05952 138 aa2.09□□□□□ -2.07
CLOCK-201ENST00000309964 SEC61BP60468 96 aaKnown RBP2.09□□□□□ -2.07
CLOCK-201ENST00000309964 DEFB116Q30KQ4 102 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms