RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 HINT1P49773 126 aaPredicted RBP10.92□□□□□ -0.66
SSSCA1-201ENST00000309328 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
SSSCA1-201ENST00000309328 A6NJY4 79 aa10.91□□□□□ -0.66
SSSCA1-201ENST00000309328 KRTAP13-1Q8IUC0 172 aa10.91□□□□□ -0.66
SSSCA1-201ENST00000309328 ABCA13Q86UQ4 5058 aa10.91□□□□□ -0.66
SSSCA1-201ENST00000309328 A4D1N5 150 aa10.9□□□□□ -0.66
SSSCA1-201ENST00000309328 ZNF73O43830 326 aaPredicted RBP10.9□□□□□ -0.66
SSSCA1-201ENST00000309328 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
SSSCA1-201ENST00000309328 A6NDN8 102 aa10.89□□□□□ -0.67
SSSCA1-201ENST00000309328 OXTP01178 125 aa10.89□□□□□ -0.67
SSSCA1-201ENST00000309328 KRTAP4-16G5E9R7 235 aaPredicted RBP10.88□□□□□ -0.67
SSSCA1-201ENST00000309328 HSD52Q0P140 79 aa10.88□□□□□ -0.67
SSSCA1-201ENST00000309328 CEND1Q8N111 149 aa10.88□□□□□ -0.67
SSSCA1-201ENST00000309328 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
SSSCA1-201ENST00000309328 PRLHP81277 87 aa10.85□□□□□ -0.67
SSSCA1-201ENST00000309328 Q6ZRX8 168 aa10.85□□□□□ -0.67
SSSCA1-201ENST00000309328 MYCBP2O75592 4640 aa10.85□□□□□ -0.67
SSSCA1-201ENST00000309328 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
SSSCA1-201ENST00000309328 B5MCH6 92 aa10.84□□□□□ -0.67
SSSCA1-201ENST00000309328 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
SSSCA1-201ENST00000309328 TSTD3H0UI37 97 aa10.83□□□□□ -0.68
SSSCA1-201ENST00000309328 C12orf57Q99622 126 aa10.83□□□□□ -0.68
SSSCA1-201ENST00000309328 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
SSSCA1-201ENST00000309328 RAB37Q96AX2 223 aa10.82□□□□□ -0.68
SSSCA1-201ENST00000309328 HIGD2AQ9BW72 106 aa10.82□□□□□ -0.68
SSSCA1-201ENST00000309328 ZNF706Q9Y5V0 76 aaPredicted RBP10.82□□□□□ -0.68
SSSCA1-201ENST00000309328 C6orf99Q4VX62 202 aa10.81□□□□□ -0.68
SSSCA1-201ENST00000309328 A0A1B0GWB2 263 aa10.8□□□□□ -0.68
SSSCA1-201ENST00000309328 VAMP3Q15836 100 aa10.8□□□□□ -0.68
SSSCA1-201ENST00000309328 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
SSSCA1-201ENST00000309328 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
SSSCA1-201ENST00000309328 CFC1BP0CG36 223 aa10.79□□□□□ -0.68
SSSCA1-201ENST00000309328 CFC1P0CG37 223 aa10.79□□□□□ -0.68
SSSCA1-201ENST00000309328 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
SSSCA1-201ENST00000309328 ELOF1P60002 83 aaKnown RBP10.79□□□□□ -0.68
SSSCA1-201ENST00000309328 COX7BP24311 80 aa10.78□□□□□ -0.68
SSSCA1-201ENST00000309328 SMIM11BQ8TCY0 68 aa10.78□□□□□ -0.68
SSSCA1-201ENST00000309328 PRO1933Q9H354 126 aa10.78□□□□□ -0.68
SSSCA1-201ENST00000309328 J3QL48 77 aa10.76□□□□□ -0.69
SSSCA1-201ENST00000309328 FXYD2P54710 66 aa10.76□□□□□ -0.69
SSSCA1-201ENST00000309328 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
SSSCA1-201ENST00000309328 NHP2Q9NX24 153 aaKnown RBP10.76□□□□□ -0.69
SSSCA1-201ENST00000309328 PRO1854Q9UHT4 67 aa10.76□□□□□ -0.69
SSSCA1-201ENST00000309328 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
SSSCA1-201ENST00000309328 M0R143 59 aa10.75□□□□□ -0.69
SSSCA1-201ENST00000309328 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
SSSCA1-201ENST00000309328 BVES-AS1Q5T3Y7 98 aa10.75□□□□□ -0.69
SSSCA1-201ENST00000309328 Q9BRP9 147 aa10.75□□□□□ -0.69
SSSCA1-201ENST00000309328 KRTAP1-4P0C5Y4 121 aa10.74□□□□□ -0.69
SSSCA1-201ENST00000309328 LRP1Q07954 4544 aaKnown RBP10.73□□□□□ -0.69
SSSCA1-201ENST00000309328 SPRR4Q96PI1 79 aa10.72□□□□□ -0.69
SSSCA1-201ENST00000309328 SLC25A20O43772 301 aa10.71□□□□□ -0.69
SSSCA1-201ENST00000309328 CRYGAP11844 174 aa10.71□□□□□ -0.69
SSSCA1-201ENST00000309328 Q1RN00 199 aa10.7□□□□□ -0.7
SSSCA1-201ENST00000309328 SNCGO76070 127 aa10.69□□□□□ -0.7
SSSCA1-201ENST00000309328 H7C2G1 150 aa10.68□□□□□ -0.7
SSSCA1-201ENST00000309328 CTAG1AP78358 180 aa10.68□□□□□ -0.7
SSSCA1-201ENST00000309328 DMBT1Q9UGM3 2413 aaPredicted RBP10.68□□□□□ -0.7
SSSCA1-201ENST00000309328 H0YGX0 51 aa10.67□□□□□ -0.7
SSSCA1-201ENST00000309328 LINC00483Q53H64 154 aa10.67□□□□□ -0.7
SSSCA1-201ENST00000309328 ERC2-IT1O76042 136 aa10.66□□□□□ -0.7
SSSCA1-201ENST00000309328 KRTAP10-8P60410 259 aa10.66□□□□□ -0.7
SSSCA1-201ENST00000309328 MT1HL1P0DM35 61 aa10.65□□□□□ -0.7
SSSCA1-201ENST00000309328 LINC00575Q6W349 94 aa10.65□□□□□ -0.7
SSSCA1-201ENST00000309328 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
SSSCA1-201ENST00000309328 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
SSSCA1-201ENST00000309328 COX6CP09669 75 aa10.63□□□□□ -0.71
SSSCA1-201ENST00000309328 hADV29S1A0JD25 119 aa10.62□□□□□ -0.71
SSSCA1-201ENST00000309328 A0A087X002 238 aa10.61□□□□□ -0.71
SSSCA1-201ENST00000309328 A0A1B0GX51 115 aa10.61□□□□□ -0.71
SSSCA1-201ENST00000309328 K7ERJ3 54 aa10.61□□□□□ -0.71
SSSCA1-201ENST00000309328 SPRR1BP22528 89 aa10.61□□□□□ -0.71
SSSCA1-201ENST00000309328 TNXBP22105 4242 aa10.6□□□□□ -0.71
SSSCA1-201ENST00000309328 TYMSOSQ8TAI1 123 aa10.6□□□□□ -0.71
SSSCA1-201ENST00000309328 TEX49A0A1B0GTD5 131 aa10.59□□□□□ -0.71
SSSCA1-201ENST00000309328 GHRHP01286 108 aa10.59□□□□□ -0.71
SSSCA1-201ENST00000309328 PSMB2P49721 201 aa10.59□□□□□ -0.71
SSSCA1-201ENST00000309328 ANAPC11Q9NYG5 84 aa10.59□□□□□ -0.71
SSSCA1-201ENST00000309328 IGLV5-48A0A075B6I7 105 aa10.58□□□□□ -0.72
SSSCA1-201ENST00000309328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.58□□□□□ -0.72
SSSCA1-201ENST00000309328 ST20-AS1Q8NBB2 130 aa10.58□□□□□ -0.72
SSSCA1-201ENST00000309328 TRIAP1O43715 76 aa10.57□□□□□ -0.72
SSSCA1-201ENST00000309328 TSPAN13O95857 204 aa10.57□□□□□ -0.72
SSSCA1-201ENST00000309328 OCIAD2Q56VL3 154 aa10.57□□□□□ -0.72
SSSCA1-201ENST00000309328 PPDPFLQ8WWR9 84 aa10.57□□□□□ -0.72
SSSCA1-201ENST00000309328 LAMTOR3Q9UHA4 124 aa10.57□□□□□ -0.72
SSSCA1-201ENST00000309328 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
SSSCA1-201ENST00000309328 Q6ZQY7 126 aa10.53□□□□□ -0.72
SSSCA1-201ENST00000309328 SSBP3-AS1Q7Z2R9 100 aa10.53□□□□□ -0.72
SSSCA1-201ENST00000309328 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.73
SSSCA1-201ENST00000309328 H3BQ85 93 aa10.51□□□□□ -0.73
SSSCA1-201ENST00000309328 SPAG11AQ6PDA7 123 aa10.51□□□□□ -0.73
SSSCA1-201ENST00000309328 DNAL4O96015 105 aa10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 LINC01547P58512 204 aaPredicted RBP10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 BATFQ16520 125 aa10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 Q8NBF4 154 aa10.5□□□□□ -0.73
SSSCA1-201ENST00000309328 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms