RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CBY1Q9Y3M2 126 aa11.43□□□□□ -0.58
PDZRN3-202ENST00000308537 S100A7L2Q5SY68 101 aa11.42□□□□□ -0.58
PDZRN3-202ENST00000308537 DDTP30046 118 aa11.41□□□□□ -0.58
PDZRN3-202ENST00000308537 RETNLBQ9BQ08 111 aa11.41□□□□□ -0.58
PDZRN3-202ENST00000308537 ETDCA0A1B0GVM5 59 aa11.4□□□□□ -0.58
PDZRN3-202ENST00000308537 B5MCH6 92 aa11.4□□□□□ -0.58
PDZRN3-202ENST00000308537 IGLV6-57P01721 117 aa11.4□□□□□ -0.58
PDZRN3-202ENST00000308537 NPC2P61916 151 aa11.4□□□□□ -0.58
PDZRN3-202ENST00000308537 LITAFQ99732 161 aa11.4□□□□□ -0.58
PDZRN3-202ENST00000308537 CTAG1AP78358 180 aa11.39□□□□□ -0.59
PDZRN3-202ENST00000308537 ANKRD39Q53RE8 183 aa11.39□□□□□ -0.59
PDZRN3-202ENST00000308537 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
PDZRN3-202ENST00000308537 MUC17Q685J3 4493 aa11.39□□□□□ -0.59
PDZRN3-202ENST00000308537 ERC2-IT1O76042 136 aa11.38□□□□□ -0.59
PDZRN3-202ENST00000308537 LINC00483Q53H64 154 aa11.38□□□□□ -0.59
PDZRN3-202ENST00000308537 LINC00308Q8TCZ7 52 aa11.38□□□□□ -0.59
PDZRN3-202ENST00000308537 Q9BRP9 147 aa11.38□□□□□ -0.59
PDZRN3-202ENST00000308537 TTTY13Q9BZ97 58 aa11.38□□□□□ -0.59
PDZRN3-202ENST00000308537 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
PDZRN3-202ENST00000308537 Q6ZVH6 145 aa11.36□□□□□ -0.59
PDZRN3-202ENST00000308537 ZNF706Q9Y5V0 76 aaPredicted RBP11.36□□□□□ -0.59
PDZRN3-202ENST00000308537 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
PDZRN3-202ENST00000308537 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
PDZRN3-202ENST00000308537 IFITM1P13164 125 aa11.34□□□□□ -0.59
PDZRN3-202ENST00000308537 Q6ZRX8 168 aa11.34□□□□□ -0.59
PDZRN3-202ENST00000308537 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
PDZRN3-202ENST00000308537 PPDPFQ9H3Y8 114 aa11.34□□□□□ -0.59
PDZRN3-202ENST00000308537 HINT1P49773 126 aaPredicted RBP11.33□□□□□ -0.6
PDZRN3-202ENST00000308537 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
PDZRN3-202ENST00000308537 OR13C6PQ8NH95 151 aa11.32□□□□□ -0.6
PDZRN3-202ENST00000308537 TRAV23DV6A0A075B6W5 121 aa11.31□□□□□ -0.6
PDZRN3-202ENST00000308537 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-202ENST00000308537 TPRXLQ17RH7 258 aa11.3□□□□□ -0.6
PDZRN3-202ENST00000308537 SPAG11AQ6PDA7 123 aa11.3□□□□□ -0.6
PDZRN3-202ENST00000308537 Q8NBF4 154 aa11.29□□□□□ -0.6
PDZRN3-202ENST00000308537 GAGE2AQ6NT46 116 aa11.28□□□□□ -0.6
PDZRN3-202ENST00000308537 ZNF73O43830 326 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-202ENST00000308537 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
PDZRN3-202ENST00000308537 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
PDZRN3-202ENST00000308537 MOBPQ13875 183 aa11.21□□□□□ -0.61
PDZRN3-202ENST00000308537 ST20-AS1Q8NBB2 130 aa11.21□□□□□ -0.61
PDZRN3-202ENST00000308537 A6NDN8 102 aa11.2□□□□□ -0.62
PDZRN3-202ENST00000308537 SPINK1P00995 79 aa11.2□□□□□ -0.62
PDZRN3-202ENST00000308537 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
PDZRN3-202ENST00000308537 TRAV13-2A0A0B4J235 113 aa11.19□□□□□ -0.62
PDZRN3-202ENST00000308537 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
PDZRN3-202ENST00000308537 COX8AP10176 69 aa11.18□□□□□ -0.62
PDZRN3-202ENST00000308537 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-202ENST00000308537 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
PDZRN3-202ENST00000308537 VAMP8Q9BV40 100 aa11.17□□□□□ -0.62
PDZRN3-202ENST00000308537 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
PDZRN3-202ENST00000308537 FAT4Q6V0I7 4981 aa11.16□□□□□ -0.62
PDZRN3-202ENST00000308537 DLEU1O43261 78 aa11.16□□□□□ -0.62
PDZRN3-202ENST00000308537 RPS29P62273 56 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-202ENST00000308537 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
PDZRN3-202ENST00000308537 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
PDZRN3-202ENST00000308537 SPRR1BP22528 89 aa11.15□□□□□ -0.62
PDZRN3-202ENST00000308537 Q8N377 158 aa11.15□□□□□ -0.62
PDZRN3-202ENST00000308537 TRBV7-6A0A0J9YX20 115 aa11.14□□□□□ -0.63
PDZRN3-202ENST00000308537 COX7BP24311 80 aa11.14□□□□□ -0.63
PDZRN3-202ENST00000308537 C6orf99Q4VX62 202 aa11.14□□□□□ -0.63
PDZRN3-202ENST00000308537 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
PDZRN3-202ENST00000308537 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
PDZRN3-202ENST00000308537 SPATA45Q537H7 98 aa11.13□□□□□ -0.63
PDZRN3-202ENST00000308537 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
PDZRN3-202ENST00000308537 A0A1B0GWB2 263 aa11.11□□□□□ -0.63
PDZRN3-202ENST00000308537 A4D1N5 150 aa11.1□□□□□ -0.63
PDZRN3-202ENST00000308537 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
PDZRN3-202ENST00000308537 TMA7Q9Y2S6 64 aaKnown RBP11.1□□□□□ -0.63
PDZRN3-202ENST00000308537 VAMP3Q15836 100 aa11.09□□□□□ -0.63
PDZRN3-202ENST00000308537 C14orf144Q96I85 54 aa11.09□□□□□ -0.63
PDZRN3-202ENST00000308537 LCE2AQ5TA79 106 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-202ENST00000308537 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-202ENST00000308537 HIGD1BQ9P298 99 aa11.07□□□□□ -0.64
PDZRN3-202ENST00000308537 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
PDZRN3-202ENST00000308537 SMIM11BQ8TCY0 68 aa11.05□□□□□ -0.64
PDZRN3-202ENST00000308537 SLC25A20O43772 301 aa11.03□□□□□ -0.64
PDZRN3-202ENST00000308537 LINC01547P58512 204 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-202ENST00000308537 TAL2Q16559 108 aa11.03□□□□□ -0.64
PDZRN3-202ENST00000308537 LAMTOR3Q9UHA4 124 aa11.02□□□□□ -0.65
PDZRN3-202ENST00000308537 SMIM29Q86T20 159 aa11.01□□□□□ -0.65
PDZRN3-202ENST00000308537 A0A0U1RQV1 116 aa11□□□□□ -0.65
PDZRN3-202ENST00000308537 ASB16-AS1Q495Z4 193 aa11□□□□□ -0.65
PDZRN3-202ENST00000308537 PYY3Q5JQD4 70 aa11□□□□□ -0.65
PDZRN3-202ENST00000308537 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
PDZRN3-202ENST00000308537 KRTAP4-1Q9BYQ7 146 aa10.99□□□□□ -0.65
PDZRN3-202ENST00000308537 IGLV5-48A0A075B6I7 105 aa10.98□□□□□ -0.65
PDZRN3-202ENST00000308537 TMEM238LA0A1B0GVL6 79 aa10.98□□□□□ -0.65
PDZRN3-202ENST00000308537 A6NJY4 79 aa10.98□□□□□ -0.65
PDZRN3-202ENST00000308537 RAB37Q96AX2 223 aa10.98□□□□□ -0.65
PDZRN3-202ENST00000308537 BVES-AS1Q5T3Y7 98 aa10.97□□□□□ -0.65
PDZRN3-202ENST00000308537 DEFB105AQ8NG35 78 aa10.97□□□□□ -0.65
PDZRN3-202ENST00000308537 C12orf57Q99622 126 aa10.97□□□□□ -0.65
PDZRN3-202ENST00000308537 Q1RN00 199 aa10.95□□□□□ -0.66
PDZRN3-202ENST00000308537 C2orf91Q6ZV80 131 aa10.95□□□□□ -0.66
PDZRN3-202ENST00000308537 XP32Q5T750 250 aa10.94□□□□□ -0.66
PDZRN3-202ENST00000308537 CEND1Q8N111 149 aa10.94□□□□□ -0.66
PDZRN3-202ENST00000308537 A0A0B4J2C4 111 aa10.93□□□□□ -0.66
PDZRN3-202ENST00000308537 SNCGO76070 127 aa10.93□□□□□ -0.66
PDZRN3-202ENST00000308537 CFC1BP0CG36 223 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms