RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 CCDC179H3BU77 68 aa13□□□□□ -0.33
SSH3-202ENST00000308298 PSCAO43653 123 aa13□□□□□ -0.33
SSH3-202ENST00000308298 SVIPQ8NHG7 77 aa12.98□□□□□ -0.33
SSH3-202ENST00000308298 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
SSH3-202ENST00000308298 LOC110117498A0A087WWA1 95 aa12.96□□□□□ -0.34
SSH3-202ENST00000308298 CNBPP62633 177 aaKnown RBP12.95□□□□□ -0.34
SSH3-202ENST00000308298 Q6ZQT0 140 aa12.95□□□□□ -0.34
SSH3-202ENST00000308298 IGLV1-50A0A075B6I6 118 aa12.95□□□□□ -0.34
SSH3-202ENST00000308298 PRYO14603 147 aa12.95□□□□□ -0.34
SSH3-202ENST00000308298 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
SSH3-202ENST00000308298 RPL37AP8A6NKH3 93 aa12.94□□□□□ -0.34
SSH3-202ENST00000308298 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
SSH3-202ENST00000308298 SS18L2Q9UHA2 77 aa12.94□□□□□ -0.34
SSH3-202ENST00000308298 DNAH10Q8IVF4 4471 aa12.93□□□□□ -0.34
SSH3-202ENST00000308298 KRTAP21-3Q3LHN1 58 aa12.93□□□□□ -0.34
SSH3-202ENST00000308298 Q6JHZ5 121 aa12.93□□□□□ -0.34
SSH3-202ENST00000308298 DSCR8Q96T75 97 aa12.93□□□□□ -0.34
SSH3-202ENST00000308298 C14orf177Q52M58 125 aa12.92□□□□□ -0.34
SSH3-202ENST00000308298 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
SSH3-202ENST00000308298 PDE6GP18545 87 aa12.9□□□□□ -0.34
SSH3-202ENST00000308298 SPRR1AP35321 89 aa12.9□□□□□ -0.34
SSH3-202ENST00000308298 NBDYA0A0U1RRE5 68 aa12.89□□□□□ -0.35
SSH3-202ENST00000308298 KRTAP4-16G5E9R7 235 aaPredicted RBP12.89□□□□□ -0.35
SSH3-202ENST00000308298 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
SSH3-202ENST00000308298 Q6ZRX8 168 aa12.89□□□□□ -0.35
SSH3-202ENST00000308298 A0A096LNI7 61 aa12.88□□□□□ -0.35
SSH3-202ENST00000308298 C16orf90A8MZG2 172 aa12.88□□□□□ -0.35
SSH3-202ENST00000308298 ETDCA0A1B0GVM5 59 aa12.88□□□□□ -0.35
SSH3-202ENST00000308298 DHRS4-AS1Q9P1J3 65 aa12.88□□□□□ -0.35
SSH3-202ENST00000308298 DNAH7Q8WXX0 4024 aa12.87□□□□□ -0.35
SSH3-202ENST00000308298 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.86□□□□□ -0.35
SSH3-202ENST00000308298 IGKV3D-7A0A0C4DH55 119 aa12.86□□□□□ -0.35
SSH3-202ENST00000308298 TRBV7-4A0A0J9YYF1 115 aa12.86□□□□□ -0.35
SSH3-202ENST00000308298 ATOX1O00244 68 aa12.85□□□□□ -0.35
SSH3-202ENST00000308298 HIST1H4AP62805 103 aaKnown RBP12.85□□□□□ -0.35
SSH3-202ENST00000308298 TENM2Q9NT68 2774 aa12.84□□□□□ -0.35
SSH3-202ENST00000308298 IGKV2-24A0A0C4DH68 120 aa12.84□□□□□ -0.35
SSH3-202ENST00000308298 UQCRQO14949 82 aa12.84□□□□□ -0.35
SSH3-202ENST00000308298 UBL5Q9BZL1 73 aa12.84□□□□□ -0.35
SSH3-202ENST00000308298 PRKDCP78527 4128 aaKnown RBP12.83□□□□□ -0.36
SSH3-202ENST00000308298 M0R2N4 97 aa12.83□□□□□ -0.36
SSH3-202ENST00000308298 Q9BRP9 147 aa12.83□□□□□ -0.36
SSH3-202ENST00000308298 ATP5EP2Q5VTU8 51 aa12.83□□□□□ -0.36
SSH3-202ENST00000308298 C3orf22Q8N5N4 141 aa12.83□□□□□ -0.36
SSH3-202ENST00000308298 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
SSH3-202ENST00000308298 REG3GQ6UW15 175 aa12.81□□□□□ -0.36
SSH3-202ENST00000308298 Q6ZRN7 208 aaPredicted RBP12.8□□□□□ -0.36
SSH3-202ENST00000308298 A0A1W2PNN7 141 aa12.79□□□□□ -0.36
SSH3-202ENST00000308298 Q8N377 158 aa12.79□□□□□ -0.36
SSH3-202ENST00000308298 DEFB105AQ8NG35 78 aa12.79□□□□□ -0.36
SSH3-202ENST00000308298 LINC01547P58512 204 aaPredicted RBP12.79□□□□□ -0.36
SSH3-202ENST00000308298 STARD9Q9P2P6 4700 aa12.78□□□□□ -0.36
SSH3-202ENST00000308298 COX7CP15954 63 aa12.78□□□□□ -0.36
SSH3-202ENST00000308298 C9orf153Q5TBE3 101 aa12.78□□□□□ -0.36
SSH3-202ENST00000308298 C9orf163Q8N9P6 203 aa12.77□□□□□ -0.37
SSH3-202ENST00000308298 MEGF8Q7Z7M0 2845 aa12.76□□□□□ -0.37
SSH3-202ENST00000308298 DNHD1Q96M86 4753 aa12.76□□□□□ -0.37
SSH3-202ENST00000308298 PKIGQ9Y2B9 76 aa12.76□□□□□ -0.37
SSH3-202ENST00000308298 UBE2BP63146 152 aa12.75□□□□□ -0.37
SSH3-202ENST00000308298 VPS13DQ5THJ4 4388 aa12.75□□□□□ -0.37
SSH3-202ENST00000308298 Q6ZVQ6 151 aa12.74□□□□□ -0.37
SSH3-202ENST00000308298 IGLV5-48A0A075B6I7 105 aa12.73□□□□□ -0.37
SSH3-202ENST00000308298 CHTF8P0CG12 524 aa12.73□□□□□ -0.37
SSH3-202ENST00000308298 ST20-AS1Q8NBB2 130 aa12.72□□□□□ -0.37
SSH3-202ENST00000308298 A0A087WVE0 104 aa12.72□□□□□ -0.37
SSH3-202ENST00000308298 ERC2-IT1O76042 136 aa12.72□□□□□ -0.37
SSH3-202ENST00000308298 CRYGAP11844 174 aa12.69□□□□□ -0.38
SSH3-202ENST00000308298 FAM19A1Q7Z5A9 133 aa12.68□□□□□ -0.38
SSH3-202ENST00000308298 SERP2Q8N6R1 65 aa12.67□□□□□ -0.38
SSH3-202ENST00000308298 HAMPP81172 84 aa12.67□□□□□ -0.38
SSH3-202ENST00000308298 PHF5AQ7RTV0 110 aaKnown RBP12.67□□□□□ -0.38
SSH3-202ENST00000308298 LINC00474Q9P2X8 69 aa12.67□□□□□ -0.38
SSH3-202ENST00000308298 TNP2Q05952 138 aa12.66□□□□□ -0.38
SSH3-202ENST00000308298 PRLHP81277 87 aa12.65□□□□□ -0.38
SSH3-202ENST00000308298 SMIM20Q8N5G0 67 aa12.64□□□□□ -0.39
SSH3-202ENST00000308298 CXCL6P80162 114 aa12.63□□□□□ -0.39
SSH3-202ENST00000308298 A0A087WTM6 91 aa12.62□□□□□ -0.39
SSH3-202ENST00000308298 Q6ZR54 194 aa12.62□□□□□ -0.39
SSH3-202ENST00000308298 KRTAP11-1Q8IUC1 163 aa12.62□□□□□ -0.39
SSH3-202ENST00000308298 PANO1I0J062 215 aa12.6□□□□□ -0.39
SSH3-202ENST00000308298 C1orf137Q5JT78 98 aa12.6□□□□□ -0.39
SSH3-202ENST00000308298 HIGD2AQ9BW72 106 aa12.59□□□□□ -0.39
SSH3-202ENST00000308298 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.4
SSH3-202ENST00000308298 SMIM29Q86T20 159 aa12.58□□□□□ -0.4
SSH3-202ENST00000308298 H0Y9J4 135 aa12.57□□□□□ -0.4
SSH3-202ENST00000308298 A0A1B0GW54 56 aa12.57□□□□□ -0.4
SSH3-202ENST00000308298 C3orf84H3BNL1 204 aa12.57□□□□□ -0.4
SSH3-202ENST00000308298 A0A1W2PNM2 257 aa12.56□□□□□ -0.4
SSH3-202ENST00000308298 SPACA4Q8TDM5 124 aa12.56□□□□□ -0.4
SSH3-202ENST00000308298 F8WEM9 126 aa12.55□□□□□ -0.4
SSH3-202ENST00000308298 NREPQ16612 68 aa12.55□□□□□ -0.4
SSH3-202ENST00000308298 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
SSH3-202ENST00000308298 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
SSH3-202ENST00000308298 BCE1O60756 84 aa12.54□□□□□ -0.4
SSH3-202ENST00000308298 SCXQ7RTU7 201 aa12.54□□□□□ -0.4
SSH3-202ENST00000308298 Q8NBF4 154 aa12.54□□□□□ -0.4
SSH3-202ENST00000308298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.54□□□□□ -0.4
SSH3-202ENST00000308298 RTL8CO15255 209 aa12.52□□□□□ -0.41
SSH3-202ENST00000308298 UBE2AP49459 152 aa12.51□□□□□ -0.41
SSH3-202ENST00000308298 LINC00476Q8WZB0 136 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms