RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ZNF815PA8K554 130 aa9.81□□□□□ -0.84
HMGCLL1-202ENST00000308161 C3orf79P0CE67 100 aa9.81□□□□□ -0.84
HMGCLL1-202ENST00000308161 Q9BRP9 147 aa9.81□□□□□ -0.84
HMGCLL1-202ENST00000308161 Q6ZRX8 168 aa9.8□□□□□ -0.84
HMGCLL1-202ENST00000308161 TTTY13Q9BZ97 58 aa9.8□□□□□ -0.84
HMGCLL1-202ENST00000308161 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
HMGCLL1-202ENST00000308161 IGLV9-49A0A0B4J1Y8 123 aa9.79□□□□□ -0.84
HMGCLL1-202ENST00000308161 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
HMGCLL1-202ENST00000308161 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
HMGCLL1-202ENST00000308161 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
HMGCLL1-202ENST00000308161 LITAFQ99732 161 aa9.78□□□□□ -0.84
HMGCLL1-202ENST00000308161 ZNF73O43830 326 aaPredicted RBP9.77□□□□□ -0.85
HMGCLL1-202ENST00000308161 MOBPQ13875 183 aa9.77□□□□□ -0.85
HMGCLL1-202ENST00000308161 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
HMGCLL1-202ENST00000308161 JOSD1Q15040 202 aaPredicted RBP9.76□□□□□ -0.85
HMGCLL1-202ENST00000308161 COA6Q5JTJ3 125 aaKnown RBP9.76□□□□□ -0.85
HMGCLL1-202ENST00000308161 CDIP1Q9H305 208 aa9.76□□□□□ -0.85
HMGCLL1-202ENST00000308161 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
HMGCLL1-202ENST00000308161 TIMM17BO60830 172 aa9.75□□□□□ -0.85
HMGCLL1-202ENST00000308161 CTAG1AP78358 180 aa9.75□□□□□ -0.85
HMGCLL1-202ENST00000308161 C20orf202A1L168 122 aa9.74□□□□□ -0.85
HMGCLL1-202ENST00000308161 HINT1P49773 126 aaPredicted RBP9.74□□□□□ -0.85
HMGCLL1-202ENST00000308161 MUC2Q02817 5179 aa9.73□□□□□ -0.85
HMGCLL1-202ENST00000308161 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
HMGCLL1-202ENST00000308161 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
HMGCLL1-202ENST00000308161 CBY1Q9Y3M2 126 aa9.72□□□□□ -0.85
HMGCLL1-202ENST00000308161 TPRXLQ17RH7 258 aa9.71□□□□□ -0.86
HMGCLL1-202ENST00000308161 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.86
HMGCLL1-202ENST00000308161 ST20-AS1Q8NBB2 130 aa9.71□□□□□ -0.86
HMGCLL1-202ENST00000308161 SPINK1P00995 79 aa9.7□□□□□ -0.86
HMGCLL1-202ENST00000308161 ANKRD39Q53RE8 183 aa9.7□□□□□ -0.86
HMGCLL1-202ENST00000308161 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
HMGCLL1-202ENST00000308161 SSBP3-AS1Q7Z2R9 100 aa9.67□□□□□ -0.86
HMGCLL1-202ENST00000308161 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
HMGCLL1-202ENST00000308161 LINC00518Q8N0U6 118 aa9.66□□□□□ -0.86
HMGCLL1-202ENST00000308161 C6orf99Q4VX62 202 aa9.65□□□□□ -0.86
HMGCLL1-202ENST00000308161 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
HMGCLL1-202ENST00000308161 COX7BP24311 80 aa9.63□□□□□ -0.87
HMGCLL1-202ENST00000308161 DHRS4-AS1Q9P1J3 65 aa9.63□□□□□ -0.87
HMGCLL1-202ENST00000308161 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
HMGCLL1-202ENST00000308161 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
HMGCLL1-202ENST00000308161 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
HMGCLL1-202ENST00000308161 A6NDN8 102 aa9.61□□□□□ -0.87
HMGCLL1-202ENST00000308161 S100A2P29034 98 aa9.61□□□□□ -0.87
HMGCLL1-202ENST00000308161 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-202ENST00000308161 C5orf52A6NGY3 159 aa9.6□□□□□ -0.87
HMGCLL1-202ENST00000308161 AKR1D1P51857 326 aa9.6□□□□□ -0.87
HMGCLL1-202ENST00000308161 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
HMGCLL1-202ENST00000308161 Q8N377 158 aa9.6□□□□□ -0.87
HMGCLL1-202ENST00000308161 IFITM1P13164 125 aa9.59□□□□□ -0.87
HMGCLL1-202ENST00000308161 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
HMGCLL1-202ENST00000308161 RPS29P62273 56 aaKnown RBP9.58□□□□□ -0.88
HMGCLL1-202ENST00000308161 KRTAP13-3Q3SY46 172 aa9.58□□□□□ -0.88
HMGCLL1-202ENST00000308161 HIST3H2BBQ8N257 126 aa9.58□□□□□ -0.88
HMGCLL1-202ENST00000308161 SLC25A20O43772 301 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 TAL2Q16559 108 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 HRCT1Q6UXD1 115 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 Q6ZVH6 145 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 HIST1H2BLQ99880 126 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
HMGCLL1-202ENST00000308161 SPRR1BP22528 89 aa9.56□□□□□ -0.88
HMGCLL1-202ENST00000308161 Q1RN00 199 aa9.56□□□□□ -0.88
HMGCLL1-202ENST00000308161 SNRPEP62304 92 aaKnown RBP9.56□□□□□ -0.88
HMGCLL1-202ENST00000308161 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
HMGCLL1-202ENST00000308161 S100A6P06703 90 aa9.55□□□□□ -0.88
HMGCLL1-202ENST00000308161 S100A1P23297 94 aa9.55□□□□□ -0.88
HMGCLL1-202ENST00000308161 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
HMGCLL1-202ENST00000308161 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
HMGCLL1-202ENST00000308161 TRAV13-2A0A0B4J235 113 aa9.51□□□□□ -0.89
HMGCLL1-202ENST00000308161 TEX49A0A1B0GTD5 131 aa9.51□□□□□ -0.89
HMGCLL1-202ENST00000308161 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
HMGCLL1-202ENST00000308161 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
HMGCLL1-202ENST00000308161 LIMD2Q9BT23 127 aa9.49□□□□□ -0.89
HMGCLL1-202ENST00000308161 SCGB1D1O95968 90 aa9.47□□□□□ -0.89
HMGCLL1-202ENST00000308161 PRO1933Q9H354 126 aa9.47□□□□□ -0.89
HMGCLL1-202ENST00000308161 A4D1N5 150 aa9.46□□□□□ -0.9
HMGCLL1-202ENST00000308161 H7C2G1 150 aa9.45□□□□□ -0.9
HMGCLL1-202ENST00000308161 ASB16-AS1Q495Z4 193 aa9.45□□□□□ -0.9
HMGCLL1-202ENST00000308161 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-202ENST00000308161 IGLV5-48A0A075B6I7 105 aa9.44□□□□□ -0.9
HMGCLL1-202ENST00000308161 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
HMGCLL1-202ENST00000308161 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
HMGCLL1-202ENST00000308161 SMIM29Q86T20 159 aa9.44□□□□□ -0.9
HMGCLL1-202ENST00000308161 A0A0G2JQZ4 141 aa9.43□□□□□ -0.9
HMGCLL1-202ENST00000308161 VAMP3Q15836 100 aa9.42□□□□□ -0.9
HMGCLL1-202ENST00000308161 C12orf57Q99622 126 aa9.42□□□□□ -0.9
HMGCLL1-202ENST00000308161 XP32Q5T750 250 aa9.41□□□□□ -0.9
HMGCLL1-202ENST00000308161 CD164Q04900 197 aa9.4□□□□□ -0.9
HMGCLL1-202ENST00000308161 HIST1H4GQ99525 98 aa9.4□□□□□ -0.9
HMGCLL1-202ENST00000308161 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
HMGCLL1-202ENST00000308161 LCE2AQ5TA79 106 aaPredicted RBP9.37□□□□□ -0.91
HMGCLL1-202ENST00000308161 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
HMGCLL1-202ENST00000308161 F8WEM9 126 aa9.36□□□□□ -0.91
HMGCLL1-202ENST00000308161 COX8AP10176 69 aa9.36□□□□□ -0.91
HMGCLL1-202ENST00000308161 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
HMGCLL1-202ENST00000308161 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
HMGCLL1-202ENST00000308161 Q6ZQY7 126 aa9.35□□□□□ -0.91
HMGCLL1-202ENST00000308161 LCE2BO14633 110 aa9.33□□□□□ -0.92
HMGCLL1-202ENST00000308161 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms