RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 HIST1H2BBP33778 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST1H2BDP58876 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST1H2BCP62807 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 MOBPQ13875 183 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST2H2BEQ16778 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST1H2BHQ93079 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST1H2BNQ99877 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 HIST1H2BMQ99879 126 aa16.33■□□□□ 0.2
H2AFV-202ENST00000308153 IGLV9-49A0A0B4J1Y8 123 aa16.31■□□□□ 0.2
H2AFV-202ENST00000308153 LITAFQ99732 161 aa16.3■□□□□ 0.2
H2AFV-202ENST00000308153 ZNF73O43830 326 aaPredicted RBP16.28■□□□□ 0.2
H2AFV-202ENST00000308153 SSBP3-AS1Q7Z2R9 100 aa16.28■□□□□ 0.2
H2AFV-202ENST00000308153 KRTAP13-3Q3SY46 172 aa16.27■□□□□ 0.2
H2AFV-202ENST00000308153 LINC01545Q5VT33 79 aa16.27■□□□□ 0.2
H2AFV-202ENST00000308153 JOSD1Q15040 202 aaPredicted RBP16.26■□□□□ 0.19
H2AFV-202ENST00000308153 LCE2AQ5TA79 106 aaPredicted RBP16.26■□□□□ 0.19
H2AFV-202ENST00000308153 RPS29P62273 56 aaKnown RBP16.24■□□□□ 0.19
H2AFV-202ENST00000308153 LINC00308Q8TCZ7 52 aa16.24■□□□□ 0.19
H2AFV-202ENST00000308153 TIMM17BO60830 172 aa16.22■□□□□ 0.19
H2AFV-202ENST00000308153 PET117Q6UWS5 81 aa16.22■□□□□ 0.19
H2AFV-202ENST00000308153 Q8N377 158 aa16.22■□□□□ 0.19
H2AFV-202ENST00000308153 SPANXCQ9NY87 97 aa16.22■□□□□ 0.19
H2AFV-202ENST00000308153 ST20-AS1Q8NBB2 130 aa16.21■□□□□ 0.19
H2AFV-202ENST00000308153 TTTY13Q9BZ97 58 aa16.18■□□□□ 0.18
H2AFV-202ENST00000308153 ZNF815PA8K554 130 aa16.17■□□□□ 0.18
H2AFV-202ENST00000308153 CBY1Q9Y3M2 126 aa16.17■□□□□ 0.18
H2AFV-202ENST00000308153 C3orf79P0CE67 100 aa16.16■□□□□ 0.18
H2AFV-202ENST00000308153 C5orf52A6NGY3 159 aa16.15■□□□□ 0.18
H2AFV-202ENST00000308153 HINT1P49773 126 aaPredicted RBP16.14■□□□□ 0.17
H2AFV-202ENST00000308153 C9orf153Q5TBE3 101 aa16.14■□□□□ 0.17
H2AFV-202ENST00000308153 OR13C6PQ8NH95 151 aa16.13■□□□□ 0.17
H2AFV-202ENST00000308153 SLC25A20O43772 301 aa16.12■□□□□ 0.17
H2AFV-202ENST00000308153 ASB16-AS1Q495Z4 193 aa16.11■□□□□ 0.17
H2AFV-202ENST00000308153 COA6Q5JTJ3 125 aaKnown RBP16.11■□□□□ 0.17
H2AFV-202ENST00000308153 SPANXDQ9BXN6 97 aa16.11■□□□□ 0.17
H2AFV-202ENST00000308153 SPRR1BP22528 89 aa16.09■□□□□ 0.17
H2AFV-202ENST00000308153 DHRS4-AS1Q9P1J3 65 aa16.06■□□□□ 0.16
H2AFV-202ENST00000308153 KRTDAPP60985 99 aa16.05■□□□□ 0.16
H2AFV-202ENST00000308153 ELOF1P60002 83 aaKnown RBP16.04■□□□□ 0.16
H2AFV-202ENST00000308153 LINC00518Q8N0U6 118 aa16.04■□□□□ 0.16
H2AFV-202ENST00000308153 C6orf99Q4VX62 202 aa16.02■□□□□ 0.16
H2AFV-202ENST00000308153 KRTAP4-1Q9BYQ7 146 aa16.01■□□□□ 0.15
H2AFV-202ENST00000308153 COX7BP24311 80 aa16■□□□□ 0.15
H2AFV-202ENST00000308153 ANKRD39Q53RE8 183 aa16■□□□□ 0.15
H2AFV-202ENST00000308153 KRTAP9-2Q9BYQ4 174 aa15.99■□□□□ 0.15
H2AFV-202ENST00000308153 SLC25A34Q6PIV7 304 aa15.98■□□□□ 0.15
H2AFV-202ENST00000308153 SCGB1D4Q6XE38 83 aa15.98■□□□□ 0.15
H2AFV-202ENST00000308153 SEC61BP60468 96 aaKnown RBP15.97■□□□□ 0.15
H2AFV-202ENST00000308153 C20orf202A1L168 122 aa15.95■□□□□ 0.14
H2AFV-202ENST00000308153 XP32Q5T750 250 aa15.95■□□□□ 0.14
H2AFV-202ENST00000308153 ATOH7Q8N100 152 aa15.94■□□□□ 0.14
H2AFV-202ENST00000308153 LAMTOR3Q9UHA4 124 aa15.94■□□□□ 0.14
H2AFV-202ENST00000308153 TRBV7-6A0A0J9YX20 115 aa15.91■□□□□ 0.14
H2AFV-202ENST00000308153 IFITM1P13164 125 aa15.91■□□□□ 0.14
H2AFV-202ENST00000308153 HRCT1Q6UXD1 115 aa15.91■□□□□ 0.14
H2AFV-202ENST00000308153 PCP2Q8IVA1 136 aa15.9■□□□□ 0.14
H2AFV-202ENST00000308153 LIMD2Q9BT23 127 aa15.9■□□□□ 0.14
H2AFV-202ENST00000308153 TAL2Q16559 108 aa15.89■□□□□ 0.13
H2AFV-202ENST00000308153 Q6ZVH6 145 aa15.89■□□□□ 0.13
H2AFV-202ENST00000308153 COPS9Q8WXC6 57 aa15.89■□□□□ 0.13
H2AFV-202ENST00000308153 Q1RN00 199 aa15.88■□□□□ 0.13
H2AFV-202ENST00000308153 DEFB105AQ8NG35 78 aa15.88■□□□□ 0.13
H2AFV-202ENST00000308153 MUSTN1Q8IVN3 82 aa15.87■□□□□ 0.13
H2AFV-202ENST00000308153 TEX49A0A1B0GTD5 131 aa15.86■□□□□ 0.13
H2AFV-202ENST00000308153 A0A1B0GWB2 263 aa15.86■□□□□ 0.13
H2AFV-202ENST00000308153 A6NDN8 102 aa15.85■□□□□ 0.13
H2AFV-202ENST00000308153 LINC01547P58512 204 aaPredicted RBP15.84■□□□□ 0.13
H2AFV-202ENST00000308153 SMIM29Q86T20 159 aa15.84■□□□□ 0.13
H2AFV-202ENST00000308153 CD164Q04900 197 aa15.82■□□□□ 0.12
H2AFV-202ENST00000308153 IGLV5-48A0A075B6I7 105 aa15.81■□□□□ 0.12
H2AFV-202ENST00000308153 AKR1D1P51857 326 aa15.81■□□□□ 0.12
H2AFV-202ENST00000308153 PRO1933Q9H354 126 aa15.81■□□□□ 0.12
H2AFV-202ENST00000308153 S100A1P23297 94 aa15.8■□□□□ 0.12
H2AFV-202ENST00000308153 TRAV13-2A0A0B4J235 113 aa15.75■□□□□ 0.11
H2AFV-202ENST00000308153 SNRPEP62304 92 aaKnown RBP15.75■□□□□ 0.11
H2AFV-202ENST00000308153 SMIM11BQ8TCY0 68 aa15.75■□□□□ 0.11
H2AFV-202ENST00000308153 A4D1N5 150 aa15.74■□□□□ 0.11
H2AFV-202ENST00000308153 H7C2G1 150 aa15.73■□□□□ 0.11
H2AFV-202ENST00000308153 Q5XG85 94 aa15.73■□□□□ 0.11
H2AFV-202ENST00000308153 C9orf92A6NGG3 77 aa15.72■□□□□ 0.11
H2AFV-202ENST00000308153 A0A0G2JQZ4 141 aa15.71■□□□□ 0.11
H2AFV-202ENST00000308153 HIST3H2BBQ8N257 126 aa15.71■□□□□ 0.11
H2AFV-202ENST00000308153 HIST1H2BLQ99880 126 aa15.7■□□□□ 0.1
H2AFV-202ENST00000308153 S100A2P29034 98 aa15.69■□□□□ 0.1
H2AFV-202ENST00000308153 NHP2Q9NX24 153 aaKnown RBP15.68■□□□□ 0.1
H2AFV-202ENST00000308153 PCOTHQ58A44 107 aa15.65■□□□□ 0.1
H2AFV-202ENST00000308153 C1orf195Q5TG92 126 aa15.65■□□□□ 0.1
H2AFV-202ENST00000308153 LCE2CQ5TA81 110 aa15.63■□□□□ 0.09
H2AFV-202ENST00000308153 S100A6P06703 90 aa15.62■□□□□ 0.09
H2AFV-202ENST00000308153 KRTAP19-2Q3LHN2 52 aa15.61■□□□□ 0.09
H2AFV-202ENST00000308153 LINC00575Q6W349 94 aa15.59■□□□□ 0.09
H2AFV-202ENST00000308153 HSBP1L1C9JCN9 74 aa15.58■□□□□ 0.08
H2AFV-202ENST00000308153 VAMP3Q15836 100 aa15.57■□□□□ 0.08
H2AFV-202ENST00000308153 IGLV8-61A0A075B6I0 122 aa15.56■□□□□ 0.08
H2AFV-202ENST00000308153 Q6ZQY7 126 aa15.52■□□□□ 0.08
H2AFV-202ENST00000308153 hADV29S1A0JD25 119 aa15.5■□□□□ 0.07
H2AFV-202ENST00000308153 KRTAP9-6A0A140TA67 174 aa15.49■□□□□ 0.07
H2AFV-202ENST00000308153 F8WEM9 126 aa15.49■□□□□ 0.07
H2AFV-202ENST00000308153 TCL1BO95988 128 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms