RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
PTPN9-201ENST00000306726 FAM19A3Q7Z5A8 133 aa9.77□□□□□ -0.85
PTPN9-201ENST00000306726 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
PTPN9-201ENST00000306726 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
PTPN9-201ENST00000306726 LELP1Q5T871 98 aa9.76□□□□□ -0.85
PTPN9-201ENST00000306726 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
PTPN9-201ENST00000306726 LYPD5Q6UWN5 251 aa9.75□□□□□ -0.85
PTPN9-201ENST00000306726 HIGD2AQ9BW72 106 aa9.75□□□□□ -0.85
PTPN9-201ENST00000306726 WFDC13Q8IUB5 93 aa9.75□□□□□ -0.85
PTPN9-201ENST00000306726 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
PTPN9-201ENST00000306726 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.74□□□□□ -0.85
PTPN9-201ENST00000306726 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
PTPN9-201ENST00000306726 COX17Q14061 63 aa9.74□□□□□ -0.85
PTPN9-201ENST00000306726 MIFP14174 115 aa9.73□□□□□ -0.85
PTPN9-201ENST00000306726 ST20-AS1Q8NBB2 130 aa9.73□□□□□ -0.85
PTPN9-201ENST00000306726 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
PTPN9-201ENST00000306726 NDUFC2O95298 119 aa9.73□□□□□ -0.85
PTPN9-201ENST00000306726 CSMD3Q7Z407 3707 aa9.72□□□□□ -0.85
PTPN9-201ENST00000306726 ATP5EP2Q5VTU8 51 aa9.71□□□□□ -0.85
PTPN9-201ENST00000306726 SYCNQ0VAF6 134 aa9.71□□□□□ -0.86
PTPN9-201ENST00000306726 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
PTPN9-201ENST00000306726 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPN9-201ENST00000306726 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
PTPN9-201ENST00000306726 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
PTPN9-201ENST00000306726 Q6ZRP5 223 aa9.69□□□□□ -0.86
PTPN9-201ENST00000306726 TMEM254Q8TBM7 123 aa9.69□□□□□ -0.86
PTPN9-201ENST00000306726 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
PTPN9-201ENST00000306726 H7BZZ5 65 aa9.68□□□□□ -0.86
PTPN9-201ENST00000306726 KRTAP10-11P60412 298 aa9.68□□□□□ -0.86
PTPN9-201ENST00000306726 ESRGQ1W209 222 aa9.68□□□□□ -0.86
PTPN9-201ENST00000306726 TRBV7-6A0A0J9YX20 115 aa9.68□□□□□ -0.86
PTPN9-201ENST00000306726 M0R378 163 aa9.67□□□□□ -0.86
PTPN9-201ENST00000306726 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
PTPN9-201ENST00000306726 Q8NAQ8 132 aa9.66□□□□□ -0.86
PTPN9-201ENST00000306726 PSPHP1O15172 72 aa9.66□□□□□ -0.86
PTPN9-201ENST00000306726 PSCAO43653 123 aa9.66□□□□□ -0.86
PTPN9-201ENST00000306726 SERTAD4-AS1Q5TG53 156 aa9.66□□□□□ -0.86
PTPN9-201ENST00000306726 IGLV6-57P01721 117 aa9.65□□□□□ -0.86
PTPN9-201ENST00000306726 CASC10Q5T4H9 136 aa9.64□□□□□ -0.87
PTPN9-201ENST00000306726 PRLHP81277 87 aa9.64□□□□□ -0.87
PTPN9-201ENST00000306726 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
PTPN9-201ENST00000306726 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
PTPN9-201ENST00000306726 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
PTPN9-201ENST00000306726 VPREB1P12018 145 aa9.62□□□□□ -0.87
PTPN9-201ENST00000306726 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
PTPN9-201ENST00000306726 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
PTPN9-201ENST00000306726 PDE6GP18545 87 aa9.6□□□□□ -0.87
PTPN9-201ENST00000306726 Q5XG85 94 aa9.6□□□□□ -0.87
PTPN9-201ENST00000306726 RPS28P62857 69 aaKnown RBP9.6□□□□□ -0.87
PTPN9-201ENST00000306726 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
PTPN9-201ENST00000306726 ELOF1P60002 83 aaKnown RBP9.59□□□□□ -0.87
PTPN9-201ENST00000306726 K7EIL1 84 aa9.58□□□□□ -0.88
PTPN9-201ENST00000306726 FAM229BQ4G0N7 80 aa9.57□□□□□ -0.88
PTPN9-201ENST00000306726 PRYO14603 147 aa9.57□□□□□ -0.88
PTPN9-201ENST00000306726 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
PTPN9-201ENST00000306726 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
PTPN9-201ENST00000306726 ERC2-IT1O76042 136 aa9.56□□□□□ -0.88
PTPN9-201ENST00000306726 C15orf56Q8N910 161 aa9.56□□□□□ -0.88
PTPN9-201ENST00000306726 COL7A1Q02388 2944 aa9.55□□□□□ -0.88
PTPN9-201ENST00000306726 LINC00167Q96N53 147 aa9.55□□□□□ -0.88
PTPN9-201ENST00000306726 B9D2Q9BPU9 175 aa9.55□□□□□ -0.88
PTPN9-201ENST00000306726 A0A087WSZ3 146 aa9.55□□□□□ -0.88
PTPN9-201ENST00000306726 UBE2DNLQ8IWF7 75 aa9.55□□□□□ -0.88
PTPN9-201ENST00000306726 ANK2Q01484 3957 aa9.55□□□□□ -0.88
PTPN9-201ENST00000306726 H0Y9J4 135 aa9.53□□□□□ -0.88
PTPN9-201ENST00000306726 Q8N377 158 aa9.53□□□□□ -0.88
PTPN9-201ENST00000306726 LINC00612Q8N6U2 182 aa9.53□□□□□ -0.88
PTPN9-201ENST00000306726 CXCL6P80162 114 aa9.53□□□□□ -0.88
PTPN9-201ENST00000306726 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
PTPN9-201ENST00000306726 K7EQZ3 153 aa9.52□□□□□ -0.89
PTPN9-201ENST00000306726 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.89
PTPN9-201ENST00000306726 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
PTPN9-201ENST00000306726 NDUFS5O43920 106 aa9.51□□□□□ -0.89
PTPN9-201ENST00000306726 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
PTPN9-201ENST00000306726 IGKV4-1P06312 121 aa9.51□□□□□ -0.89
PTPN9-201ENST00000306726 FP248Q71RG6 208 aaPredicted RBP9.51□□□□□ -0.89
PTPN9-201ENST00000306726 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
PTPN9-201ENST00000306726 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
PTPN9-201ENST00000306726 KLKP1Q107X0 134 aa9.47□□□□□ -0.89
PTPN9-201ENST00000306726 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
PTPN9-201ENST00000306726 UBE2AP49459 152 aa9.46□□□□□ -0.89
PTPN9-201ENST00000306726 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
PTPN9-201ENST00000306726 IGLV9-49A0A0B4J1Y8 123 aa9.44□□□□□ -0.9
PTPN9-201ENST00000306726 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
PTPN9-201ENST00000306726 Q9BRP9 147 aa9.43□□□□□ -0.9
PTPN9-201ENST00000306726 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
PTPN9-201ENST00000306726 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
PTPN9-201ENST00000306726 Q6ZRX8 168 aa9.41□□□□□ -0.9
PTPN9-201ENST00000306726 MP68P56378 58 aa9.41□□□□□ -0.9
PTPN9-201ENST00000306726 NDUFC1O43677 76 aa9.4□□□□□ -0.9
PTPN9-201ENST00000306726 C1orf195Q5TG92 126 aa9.4□□□□□ -0.9
PTPN9-201ENST00000306726 LINC00588Q9Y4M8 146 aa9.4□□□□□ -0.91
PTPN9-201ENST00000306726 DHRS4-AS1Q9P1J3 65 aa9.39□□□□□ -0.91
PTPN9-201ENST00000306726 H3BNG1 76 aa9.39□□□□□ -0.91
PTPN9-201ENST00000306726 REG3GQ6UW15 175 aa9.39□□□□□ -0.91
PTPN9-201ENST00000306726 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
PTPN9-201ENST00000306726 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
PTPN9-201ENST00000306726 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
PTPN9-201ENST00000306726 C1orf64Q8NEQ6 169 aa9.37□□□□□ -0.91
PTPN9-201ENST00000306726 H3BQ85 93 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms