RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 BPTFQ12830 3046 aa11.09□□□□□ -0.63
PDS5A-201ENST00000303538 C4orf26Q17RF5 130 aa11.09□□□□□ -0.63
PDS5A-201ENST00000303538 CRIPTQ9P021 101 aa11.08□□□□□ -0.63
PDS5A-201ENST00000303538 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
PDS5A-201ENST00000303538 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
PDS5A-201ENST00000303538 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
PDS5A-201ENST00000303538 MGAM2Q2M2H8 2515 aa11.06□□□□□ -0.64
PDS5A-201ENST00000303538 A0A0D9SG42 100 aa11.06□□□□□ -0.64
PDS5A-201ENST00000303538 C15orf56Q8N910 161 aa11.06□□□□□ -0.64
PDS5A-201ENST00000303538 IGFL1Q6UW32 110 aa11.06□□□□□ -0.64
PDS5A-201ENST00000303538 COA5Q86WW8 74 aa11.04□□□□□ -0.64
PDS5A-201ENST00000303538 FLNBO75369 2602 aaKnown RBP11.03□□□□□ -0.64
PDS5A-201ENST00000303538 PCSK5Q92824 1860 aa11.03□□□□□ -0.64
PDS5A-201ENST00000303538 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
PDS5A-201ENST00000303538 CSNK1G2-AS1Q8NCQ2 148 aa11.01□□□□□ -0.65
PDS5A-201ENST00000303538 UQCR11O14957 56 aa10.99□□□□□ -0.65
PDS5A-201ENST00000303538 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
PDS5A-201ENST00000303538 KCNQ1DNQ9H478 68 aa10.98□□□□□ -0.65
PDS5A-201ENST00000303538 IGLV7-43P04211 117 aa10.98□□□□□ -0.65
PDS5A-201ENST00000303538 C19orf73Q9NVV2 129 aa10.98□□□□□ -0.65
PDS5A-201ENST00000303538 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
PDS5A-201ENST00000303538 PRO0628Q9UI54 55 aa10.97□□□□□ -0.65
PDS5A-201ENST00000303538 A0A1B0GVX0 72 aa10.97□□□□□ -0.65
PDS5A-201ENST00000303538 EPG5Q9HCE0 2579 aa10.96□□□□□ -0.66
PDS5A-201ENST00000303538 Q8N1X5 172 aa10.96□□□□□ -0.66
PDS5A-201ENST00000303538 A8MUN3 132 aa10.95□□□□□ -0.66
PDS5A-201ENST00000303538 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
PDS5A-201ENST00000303538 MIR22HGQ0VDD5 57 aa10.93□□□□□ -0.66
PDS5A-201ENST00000303538 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
PDS5A-201ENST00000303538 CASC10Q5T4H9 136 aa10.93□□□□□ -0.66
PDS5A-201ENST00000303538 C9orf163Q8N9P6 203 aa10.93□□□□□ -0.66
PDS5A-201ENST00000303538 IGLV5-48A0A075B6I7 105 aa10.92□□□□□ -0.66
PDS5A-201ENST00000303538 Q8N377 158 aa10.91□□□□□ -0.66
PDS5A-201ENST00000303538 Q6ZSA8 131 aa10.9□□□□□ -0.66
PDS5A-201ENST00000303538 HECTD1Q9ULT8 2610 aa10.89□□□□□ -0.67
PDS5A-201ENST00000303538 PRO0461Q9UI25 63 aa10.87□□□□□ -0.67
PDS5A-201ENST00000303538 LITAFQ99732 161 aa10.87□□□□□ -0.67
PDS5A-201ENST00000303538 ATRQ13535 2644 aa10.87□□□□□ -0.67
PDS5A-201ENST00000303538 PRR34Q9NV39 138 aa10.85□□□□□ -0.67
PDS5A-201ENST00000303538 TNP2Q05952 138 aa10.84□□□□□ -0.67
PDS5A-201ENST00000303538 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
PDS5A-201ENST00000303538 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
PDS5A-201ENST00000303538 GIG44P09565 113 aaPredicted RBP10.81□□□□□ -0.68
PDS5A-201ENST00000303538 MAST4O15021 2626 aa10.81□□□□□ -0.68
PDS5A-201ENST00000303538 SPRR4Q96PI1 79 aa10.81□□□□□ -0.68
PDS5A-201ENST00000303538 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
PDS5A-201ENST00000303538 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
PDS5A-201ENST00000303538 CR1P17927 2039 aa10.79□□□□□ -0.68
PDS5A-201ENST00000303538 CAMK2N1Q7Z7J9 78 aa10.78□□□□□ -0.68
PDS5A-201ENST00000303538 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.68
PDS5A-201ENST00000303538 PRR26Q8N8Z3 221 aa10.76□□□□□ -0.69
PDS5A-201ENST00000303538 PRRC2CQ9Y520 2896 aaKnown RBP10.76□□□□□ -0.69
PDS5A-201ENST00000303538 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
PDS5A-201ENST00000303538 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
PDS5A-201ENST00000303538 CDC42SE1Q9NRR8 79 aa10.74□□□□□ -0.69
PDS5A-201ENST00000303538 A0A096LNT2 108 aa10.73□□□□□ -0.69
PDS5A-201ENST00000303538 RPS28P62857 69 aaKnown RBP10.73□□□□□ -0.69
PDS5A-201ENST00000303538 CYP4F30PQ9H0H9 118 aa10.72□□□□□ -0.69
PDS5A-201ENST00000303538 PCNTO95613 3336 aa10.72□□□□□ -0.69
PDS5A-201ENST00000303538 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
PDS5A-201ENST00000303538 CEP350Q5VT06 3117 aa10.7□□□□□ -0.7
PDS5A-201ENST00000303538 DNAH12Q6ZR08 3092 aa10.68□□□□□ -0.7
PDS5A-201ENST00000303538 CNBPP62633 177 aaKnown RBP10.68□□□□□ -0.7
PDS5A-201ENST00000303538 C5orf42Q9H799 3197 aa10.67□□□□□ -0.7
PDS5A-201ENST00000303538 KLK9Q2XQG4 91 aa10.65□□□□□ -0.71
PDS5A-201ENST00000303538 LUZP6Q538Z0 58 aa10.65□□□□□ -0.71
PDS5A-201ENST00000303538 KRTAP1-3Q8IUG1 177 aa10.64□□□□□ -0.71
PDS5A-201ENST00000303538 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
PDS5A-201ENST00000303538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.61□□□□□ -0.71
PDS5A-201ENST00000303538 Q5VSD8 79 aa10.57□□□□□ -0.72
PDS5A-201ENST00000303538 KRTAP1-1Q07627 177 aa10.56□□□□□ -0.72
PDS5A-201ENST00000303538 CD164Q04900 197 aa10.54□□□□□ -0.72
PDS5A-201ENST00000303538 LINC00483Q53H64 154 aa10.53□□□□□ -0.72
PDS5A-201ENST00000303538 KLKP1Q107X0 134 aa10.51□□□□□ -0.73
PDS5A-201ENST00000303538 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
PDS5A-201ENST00000303538 FLNAP21333 2647 aaKnown RBP10.5□□□□□ -0.73
PDS5A-201ENST00000303538 HELZ2Q9BYK8 2649 aaKnown RBP10.48□□□□□ -0.73
PDS5A-201ENST00000303538 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
PDS5A-201ENST00000303538 XIRP2A4UGR9 3374 aa10.47□□□□□ -0.73
PDS5A-201ENST00000303538 H7BZZ5 65 aa10.46□□□□□ -0.73
PDS5A-201ENST00000303538 S4R3F8 94 aa10.45□□□□□ -0.74
PDS5A-201ENST00000303538 A0A1B0GU33 70 aa10.45□□□□□ -0.74
PDS5A-201ENST00000303538 CSAG1Q6PB30 78 aa10.44□□□□□ -0.74
PDS5A-201ENST00000303538 CFAP46Q8IYW2 2715 aa10.42□□□□□ -0.74
PDS5A-201ENST00000303538 Q1T7F1 81 aa10.42□□□□□ -0.74
PDS5A-201ENST00000303538 AKAP13Q12802 2813 aa10.41□□□□□ -0.74
PDS5A-201ENST00000303538 HRES1P13985 223 aa10.4□□□□□ -0.74
PDS5A-201ENST00000303538 SPANXA2-OT1Q8N9U9 137 aa10.38□□□□□ -0.75
PDS5A-201ENST00000303538 KTN1-AS1Q86SY8 53 aa10.37□□□□□ -0.75
PDS5A-201ENST00000303538 LCA10Q71F78 164 aa10.37□□□□□ -0.75
PDS5A-201ENST00000303538 R4GN34 69 aa10.36□□□□□ -0.75
PDS5A-201ENST00000303538 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
PDS5A-201ENST00000303538 SEC61BP60468 96 aaKnown RBP10.33□□□□□ -0.76
PDS5A-201ENST00000303538 FAM229BQ4G0N7 80 aa10.32□□□□□ -0.76
PDS5A-201ENST00000303538 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
PDS5A-201ENST00000303538 Q8N9P0 234 aaPredicted RBP10.3□□□□□ -0.76
PDS5A-201ENST00000303538 PLAC8Q9NZF1 115 aa10.3□□□□□ -0.76
PDS5A-201ENST00000303538 LCE6AA0A183 80 aa10.27□□□□□ -0.77
PDS5A-201ENST00000303538 SPINK7P58062 85 aa10.27□□□□□ -0.77
PDS5A-201ENST00000303538 WIPF1O43516 503 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms