RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ITPR3Q14573 2671 aa7.65□□□□□ -1.18
GCN1-201ENST00000300648 ST20-AS1Q8NBB2 130 aa7.65□□□□□ -1.18
GCN1-201ENST00000300648 K7EQZ3 153 aa7.65□□□□□ -1.19
GCN1-201ENST00000300648 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.19
GCN1-201ENST00000300648 CDSNQ15517 529 aa7.64□□□□□ -1.19
GCN1-201ENST00000300648 H7BZZ5 65 aa7.63□□□□□ -1.19
GCN1-201ENST00000300648 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
GCN1-201ENST00000300648 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
GCN1-201ENST00000300648 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
GCN1-201ENST00000300648 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
GCN1-201ENST00000300648 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
GCN1-201ENST00000300648 A0A1W2PPR1 153 aa7.6□□□□□ -1.19
GCN1-201ENST00000300648 NBDYA0A0U1RRE5 68 aa7.6□□□□□ -1.19
GCN1-201ENST00000300648 Q96NJ1 140 aa7.6□□□□□ -1.19
GCN1-201ENST00000300648 RTL8CO15255 209 aa7.59□□□□□ -1.19
GCN1-201ENST00000300648 Q1T7F1 81 aa7.58□□□□□ -1.2
GCN1-201ENST00000300648 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
GCN1-201ENST00000300648 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
GCN1-201ENST00000300648 Q8NAQ8 132 aa7.57□□□□□ -1.2
GCN1-201ENST00000300648 KRTAP10-9P60411 292 aa7.56□□□□□ -1.2
GCN1-201ENST00000300648 PHF5AQ7RTV0 110 aaKnown RBP7.56□□□□□ -1.2
GCN1-201ENST00000300648 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
GCN1-201ENST00000300648 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
GCN1-201ENST00000300648 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
GCN1-201ENST00000300648 RBM12B-AS1Q9P1G2 102 aa7.54□□□□□ -1.2
GCN1-201ENST00000300648 IGFL1Q6UW32 110 aa7.54□□□□□ -1.2
GCN1-201ENST00000300648 PRR34Q9NV39 138 aa7.53□□□□□ -1.2
GCN1-201ENST00000300648 EP400Q96L91 3159 aa7.53□□□□□ -1.2
GCN1-201ENST00000300648 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
GCN1-201ENST00000300648 LINC00588Q9Y4M8 146 aa7.51□□□□□ -1.21
GCN1-201ENST00000300648 SMR3AQ99954 134 aa7.5□□□□□ -1.21
GCN1-201ENST00000300648 KMT2BQ9UMN6 2715 aaPredicted RBP7.49□□□□□ -1.21
GCN1-201ENST00000300648 APLNQ9ULZ1 77 aa7.49□□□□□ -1.21
GCN1-201ENST00000300648 ZNF861PO60384 105 aa7.49□□□□□ -1.21
GCN1-201ENST00000300648 FAM104AQ969W3 186 aa7.48□□□□□ -1.21
GCN1-201ENST00000300648 WWC2-AS2Q96NR7 200 aa7.48□□□□□ -1.21
GCN1-201ENST00000300648 OBSCN-AS1Q96MR7 158 aa7.48□□□□□ -1.21
GCN1-201ENST00000300648 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
GCN1-201ENST00000300648 Q8N377 158 aa7.46□□□□□ -1.22
GCN1-201ENST00000300648 CHTF8P0CG12 524 aa7.45□□□□□ -1.22
GCN1-201ENST00000300648 Q75L30 129 aa7.45□□□□□ -1.22
GCN1-201ENST00000300648 CSNK1G2-AS1Q8NCQ2 148 aa7.44□□□□□ -1.22
GCN1-201ENST00000300648 NOTCH1P46531 2555 aa7.43□□□□□ -1.22
GCN1-201ENST00000300648 UNC79Q9P2D8 2635 aa7.43□□□□□ -1.22
GCN1-201ENST00000300648 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
GCN1-201ENST00000300648 IGLV5-48A0A075B6I7 105 aa7.43□□□□□ -1.22
GCN1-201ENST00000300648 C9orf129Q5T035 196 aaKnown RBP7.42□□□□□ -1.22
GCN1-201ENST00000300648 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
GCN1-201ENST00000300648 LINC00483Q53H64 154 aa7.41□□□□□ -1.22
GCN1-201ENST00000300648 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
GCN1-201ENST00000300648 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
GCN1-201ENST00000300648 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
GCN1-201ENST00000300648 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
GCN1-201ENST00000300648 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.22
GCN1-201ENST00000300648 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.23
GCN1-201ENST00000300648 TEP1Q99973 2627 aaKnown RBP7.39□□□□□ -1.23
GCN1-201ENST00000300648 DSCR10P59022 87 aa7.39□□□□□ -1.23
GCN1-201ENST00000300648 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
GCN1-201ENST00000300648 CHD6Q8TD26 2715 aa7.37□□□□□ -1.23
GCN1-201ENST00000300648 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
GCN1-201ENST00000300648 SPRR4Q96PI1 79 aa7.36□□□□□ -1.23
GCN1-201ENST00000300648 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
GCN1-201ENST00000300648 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
GCN1-201ENST00000300648 KRTAP24-1Q3LI83 254 aa7.33□□□□□ -1.24
GCN1-201ENST00000300648 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
GCN1-201ENST00000300648 SETXQ7Z333 2677 aaKnown RBP7.32□□□□□ -1.24
GCN1-201ENST00000300648 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
GCN1-201ENST00000300648 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
GCN1-201ENST00000300648 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
GCN1-201ENST00000300648 ZNF292O60281 2723 aa7.3□□□□□ -1.24
GCN1-201ENST00000300648 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
GCN1-201ENST00000300648 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
GCN1-201ENST00000300648 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
GCN1-201ENST00000300648 A0A1B0GU33 70 aa7.29□□□□□ -1.24
GCN1-201ENST00000300648 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
GCN1-201ENST00000300648 J3QL48 77 aa7.28□□□□□ -1.24
GCN1-201ENST00000300648 LINC01558Q9Y6Z2 57 aa7.27□□□□□ -1.25
GCN1-201ENST00000300648 A0A087WTM6 91 aa7.26□□□□□ -1.25
GCN1-201ENST00000300648 A0A096LNT2 108 aa7.24□□□□□ -1.25
GCN1-201ENST00000300648 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
GCN1-201ENST00000300648 Q5XG85 94 aa7.23□□□□□ -1.25
GCN1-201ENST00000300648 TNP2Q05952 138 aa7.23□□□□□ -1.25
GCN1-201ENST00000300648 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
GCN1-201ENST00000300648 PSORS1C2Q9UIG4 136 aa7.23□□□□□ -1.25
GCN1-201ENST00000300648 A0A0D9SG42 100 aa7.21□□□□□ -1.26
GCN1-201ENST00000300648 GIG44P09565 113 aaPredicted RBP7.21□□□□□ -1.26
GCN1-201ENST00000300648 NSD1Q96L73 2696 aaPredicted RBP7.2□□□□□ -1.26
GCN1-201ENST00000300648 ITPR2Q14571 2701 aa7.2□□□□□ -1.26
GCN1-201ENST00000300648 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
GCN1-201ENST00000300648 HRES1P13985 223 aa7.2□□□□□ -1.26
GCN1-201ENST00000300648 C9orf92A6NGG3 77 aa7.19□□□□□ -1.26
GCN1-201ENST00000300648 K7EIL1 84 aa7.19□□□□□ -1.26
GCN1-201ENST00000300648 ZNF575Q86XF7 245 aa7.19□□□□□ -1.26
GCN1-201ENST00000300648 Q8N1X5 172 aa7.18□□□□□ -1.26
GCN1-201ENST00000300648 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
GCN1-201ENST00000300648 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.27
GCN1-201ENST00000300648 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
GCN1-201ENST00000300648 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
GCN1-201ENST00000300648 Q5VV11 94 aa7.11□□□□□ -1.27
GCN1-201ENST00000300648 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms