RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 SPAG11BQ08648 103 aa13.47□□□□□ -0.25
HPS6-201ENST00000299238 LINC00575Q6W349 94 aa13.47□□□□□ -0.25
HPS6-201ENST00000299238 CMYA5Q8N3K9 4069 aa13.46□□□□□ -0.26
HPS6-201ENST00000299238 KRTAP24-1Q3LI83 254 aa13.45□□□□□ -0.26
HPS6-201ENST00000299238 HIGD2AQ9BW72 106 aa13.45□□□□□ -0.26
HPS6-201ENST00000299238 CYSRT1A8MQ03 144 aa13.44□□□□□ -0.26
HPS6-201ENST00000299238 ANK2Q01484 3957 aa13.44□□□□□ -0.26
HPS6-201ENST00000299238 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
HPS6-201ENST00000299238 Q6ZRU5 148 aa13.43□□□□□ -0.26
HPS6-201ENST00000299238 MUC7Q8TAX7 377 aa13.43□□□□□ -0.26
HPS6-201ENST00000299238 TENM3Q9P273 2699 aa13.42□□□□□ -0.26
HPS6-201ENST00000299238 Q6ZQY7 126 aa13.42□□□□□ -0.26
HPS6-201ENST00000299238 Q6ZRP5 223 aa13.41□□□□□ -0.26
HPS6-201ENST00000299238 EGFEM1PQ0D2K5 195 aa13.4□□□□□ -0.26
HPS6-201ENST00000299238 FLNBO75369 2602 aaKnown RBP13.4□□□□□ -0.26
HPS6-201ENST00000299238 PSPHP1O15172 72 aa13.4□□□□□ -0.26
HPS6-201ENST00000299238 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
HPS6-201ENST00000299238 STAB1Q9NY15 2570 aa13.39□□□□□ -0.27
HPS6-201ENST00000299238 KPRPQ5T749 579 aaPredicted RBP13.39□□□□□ -0.27
HPS6-201ENST00000299238 OCR1Q9BZK8 76 aa13.38□□□□□ -0.27
HPS6-201ENST00000299238 FBN1P35555 2871 aaKnown RBP13.37□□□□□ -0.27
HPS6-201ENST00000299238 A8MU10 97 aa13.37□□□□□ -0.27
HPS6-201ENST00000299238 ERC2-IT1O76042 136 aa13.37□□□□□ -0.27
HPS6-201ENST00000299238 GVQW2A0A096LPI5 108 aaPredicted RBP13.36□□□□□ -0.27
HPS6-201ENST00000299238 H3BNG1 76 aa13.36□□□□□ -0.27
HPS6-201ENST00000299238 WFDC10BQ8IUB3 73 aa13.36□□□□□ -0.27
HPS6-201ENST00000299238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.35□□□□□ -0.27
HPS6-201ENST00000299238 hDV103S1A0JD37 113 aa13.35□□□□□ -0.27
HPS6-201ENST00000299238 DNAH3Q8TD57 4116 aa13.34□□□□□ -0.27
HPS6-201ENST00000299238 IGLV6-57P01721 117 aa13.34□□□□□ -0.27
HPS6-201ENST00000299238 HIGD2BQ4VC39 106 aa13.34□□□□□ -0.27
HPS6-201ENST00000299238 C6orf48Q9UBA6 75 aa13.34□□□□□ -0.27
HPS6-201ENST00000299238 IGKV4-1P06312 121 aa13.32□□□□□ -0.28
HPS6-201ENST00000299238 NOTCH1P46531 2555 aa13.3□□□□□ -0.28
HPS6-201ENST00000299238 MAST4O15021 2626 aa13.3□□□□□ -0.28
HPS6-201ENST00000299238 PDE6GP18545 87 aa13.3□□□□□ -0.28
HPS6-201ENST00000299238 C1orf64Q8NEQ6 169 aa13.3□□□□□ -0.28
HPS6-201ENST00000299238 KRTAP26-1Q6PEX3 210 aa13.29□□□□□ -0.28
HPS6-201ENST00000299238 Q1T7F1 81 aa13.28□□□□□ -0.28
HPS6-201ENST00000299238 CD164Q04900 197 aa13.27□□□□□ -0.28
HPS6-201ENST00000299238 PRB2P02812 416 aaPredicted RBP13.26□□□□□ -0.29
HPS6-201ENST00000299238 TRAV22A0A0B4J277 110 aa13.26□□□□□ -0.29
HPS6-201ENST00000299238 FAM30AQ9NZY2 134 aa13.26□□□□□ -0.29
HPS6-201ENST00000299238 CAMK2N2Q96S95 79 aa13.25□□□□□ -0.29
HPS6-201ENST00000299238 DEFB131BA0A096LNP1 70 aa13.24□□□□□ -0.29
HPS6-201ENST00000299238 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
HPS6-201ENST00000299238 PRR4Q16378 134 aa13.24□□□□□ -0.29
HPS6-201ENST00000299238 C15orf56Q8N910 161 aa13.22□□□□□ -0.29
HPS6-201ENST00000299238 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
HPS6-201ENST00000299238 A8MUN3 132 aa13.19□□□□□ -0.3
HPS6-201ENST00000299238 VPREB1P12018 145 aa13.19□□□□□ -0.3
HPS6-201ENST00000299238 BAHCC1Q9P281 2608 aa13.19□□□□□ -0.3
HPS6-201ENST00000299238 ZNF73O43830 326 aaPredicted RBP13.19□□□□□ -0.3
HPS6-201ENST00000299238 SMIM29Q86T20 159 aa13.19□□□□□ -0.3
HPS6-201ENST00000299238 LINC01556Q5JQF7 62 aa13.18□□□□□ -0.3
HPS6-201ENST00000299238 C3orf84H3BNL1 204 aa13.18□□□□□ -0.3
HPS6-201ENST00000299238 COX7BP24311 80 aa13.17□□□□□ -0.3
HPS6-201ENST00000299238 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
HPS6-201ENST00000299238 ELOF1P60002 83 aaKnown RBP13.14□□□□□ -0.31
HPS6-201ENST00000299238 SYCNQ0VAF6 134 aa13.13□□□□□ -0.31
HPS6-201ENST00000299238 COL6A5A8TX70 2615 aa13.13□□□□□ -0.31
HPS6-201ENST00000299238 NBEAL1Q6ZS30 2694 aa13.12□□□□□ -0.31
HPS6-201ENST00000299238 H3BQ85 93 aa13.11□□□□□ -0.31
HPS6-201ENST00000299238 M0R378 163 aa13.11□□□□□ -0.31
HPS6-201ENST00000299238 MRPL55Q7Z7F7 128 aaKnown RBP13.1□□□□□ -0.31
HPS6-201ENST00000299238 RBM12B-AS1Q9P1G2 102 aa13.1□□□□□ -0.31
HPS6-201ENST00000299238 DNAH10OSP0CZ25 163 aa13.09□□□□□ -0.31
HPS6-201ENST00000299238 PSCAO43653 123 aa13.09□□□□□ -0.31
HPS6-201ENST00000299238 Q5VV11 94 aa13.06□□□□□ -0.32
HPS6-201ENST00000299238 LINC00528Q8N1L1 170 aa13.06□□□□□ -0.32
HPS6-201ENST00000299238 ZCCHC13Q8WW36 166 aaKnown RBP13.05□□□□□ -0.32
HPS6-201ENST00000299238 HUWE1Q7Z6Z7 4374 aaKnown RBP13.05□□□□□ -0.32
HPS6-201ENST00000299238 LCE6AA0A183 80 aa13.04□□□□□ -0.32
HPS6-201ENST00000299238 K7EIL1 84 aa13.04□□□□□ -0.32
HPS6-201ENST00000299238 LINC00588Q9Y4M8 146 aa13.04□□□□□ -0.32
HPS6-201ENST00000299238 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.02□□□□□ -0.33
HPS6-201ENST00000299238 KTN1-AS1Q86SY8 53 aa13.02□□□□□ -0.33
HPS6-201ENST00000299238 ST20-AS1Q8NBB2 130 aa13.02□□□□□ -0.33
HPS6-201ENST00000299238 SERTAD4-AS1Q5TG53 156 aa13.01□□□□□ -0.33
HPS6-201ENST00000299238 SPTSSBQ8NFR3 76 aa13.01□□□□□ -0.33
HPS6-201ENST00000299238 C16orf90A8MZG2 172 aa13.01□□□□□ -0.33
HPS6-201ENST00000299238 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
HPS6-201ENST00000299238 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
HPS6-201ENST00000299238 CHKB-CPT1BH3BT56 60 aa12.97□□□□□ -0.33
HPS6-201ENST00000299238 UBE2BP63146 152 aa12.97□□□□□ -0.33
HPS6-201ENST00000299238 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
HPS6-201ENST00000299238 KCNQ1DNQ9H478 68 aa12.96□□□□□ -0.33
HPS6-201ENST00000299238 NKAPP1Q8N9T2 125 aa12.96□□□□□ -0.33
HPS6-201ENST00000299238 CYP4F30PQ9H0H9 118 aa12.96□□□□□ -0.33
HPS6-201ENST00000299238 FAM168BA1KXE4 195 aa12.95□□□□□ -0.34
HPS6-201ENST00000299238 C7orf33Q8WU49 177 aa12.95□□□□□ -0.34
HPS6-201ENST00000299238 RPL37AP8A6NKH3 93 aa12.94□□□□□ -0.34
HPS6-201ENST00000299238 TLX1NBP0CAT3 122 aa12.94□□□□□ -0.34
HPS6-201ENST00000299238 LYSTQ99698 3801 aa12.94□□□□□ -0.34
HPS6-201ENST00000299238 ETDCA0A1B0GVM5 59 aa12.92□□□□□ -0.34
HPS6-201ENST00000299238 MGAM2Q2M2H8 2515 aa12.91□□□□□ -0.34
HPS6-201ENST00000299238 PLA2G2DQ9UNK4 145 aa12.9□□□□□ -0.34
HPS6-201ENST00000299238 HCG22E2RYF7 251 aa12.9□□□□□ -0.35
HPS6-201ENST00000299238 LCA10Q71F78 164 aa12.89□□□□□ -0.35
HPS6-201ENST00000299238 K7EQZ3 153 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms