RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM168BA1KXE4 195 aa15.95■□□□□ 0.14
SPTSSA-201ENST00000298130 C3orf84H3BNL1 204 aa15.95■□□□□ 0.14
SPTSSA-201ENST00000298130 PDE6GP18545 87 aa15.94■□□□□ 0.14
SPTSSA-201ENST00000298130 C11orf45Q8TAV5 145 aa15.94■□□□□ 0.14
SPTSSA-201ENST00000298130 H3BNG1 76 aa15.93■□□□□ 0.14
SPTSSA-201ENST00000298130 NKAPP1Q8N9T2 125 aa15.92■□□□□ 0.14
SPTSSA-201ENST00000298130 C7orf33Q8WU49 177 aa15.92■□□□□ 0.14
SPTSSA-201ENST00000298130 LINC01556Q5JQF7 62 aa15.91■□□□□ 0.14
SPTSSA-201ENST00000298130 TM2D3Q9BRN9 247 aa15.9■□□□□ 0.14
SPTSSA-201ENST00000298130 RMI2Q96E14 147 aa15.9■□□□□ 0.14
SPTSSA-201ENST00000298130 TRBV7-6A0A0J9YX20 115 aa15.89■□□□□ 0.13
SPTSSA-201ENST00000298130 CXCL6P80162 114 aa15.89■□□□□ 0.13
SPTSSA-201ENST00000298130 CMYA5Q8N3K9 4069 aa15.89■□□□□ 0.13
SPTSSA-201ENST00000298130 COL6A5A8TX70 2615 aa15.88■□□□□ 0.13
SPTSSA-201ENST00000298130 TRAV7A0A075B6U4 112 aa15.87■□□□□ 0.13
SPTSSA-201ENST00000298130 H3BQ85 93 aa15.86■□□□□ 0.13
SPTSSA-201ENST00000298130 BPY2O14599 106 aa15.85■□□□□ 0.13
SPTSSA-201ENST00000298130 NBEAL1Q6ZS30 2694 aa15.85■□□□□ 0.13
SPTSSA-201ENST00000298130 RPS28P62857 69 aaKnown RBP15.85■□□□□ 0.13
SPTSSA-201ENST00000298130 KRTAP24-1Q3LI83 254 aa15.85■□□□□ 0.13
SPTSSA-201ENST00000298130 Q8N377 158 aa15.84■□□□□ 0.13
SPTSSA-201ENST00000298130 ST20-AS1Q8NBB2 130 aa15.82■□□□□ 0.12
SPTSSA-201ENST00000298130 H7BZZ5 65 aa15.81■□□□□ 0.12
SPTSSA-201ENST00000298130 MRAPQ8TCY5 172 aa15.81■□□□□ 0.12
SPTSSA-201ENST00000298130 KCNQ1DNQ9H478 68 aa15.81■□□□□ 0.12
SPTSSA-201ENST00000298130 NREPQ16612 68 aa15.8■□□□□ 0.12
SPTSSA-201ENST00000298130 LINC00588Q9Y4M8 146 aa15.8■□□□□ 0.12
SPTSSA-201ENST00000298130 Q9BRP9 147 aa15.78■□□□□ 0.12
SPTSSA-201ENST00000298130 FAM236DA0A1B0GTK5 79 aa15.77■□□□□ 0.12
SPTSSA-201ENST00000298130 FAM236CP0DP71 79 aa15.77■□□□□ 0.12
SPTSSA-201ENST00000298130 CSMD3Q7Z407 3707 aa15.76■□□□□ 0.11
SPTSSA-201ENST00000298130 KRTAP7-1Q8IUC3 87 aa15.76■□□□□ 0.11
SPTSSA-201ENST00000298130 C4orf26Q17RF5 130 aa15.76■□□□□ 0.11
SPTSSA-201ENST00000298130 DNAH10OSP0CZ25 163 aa15.75■□□□□ 0.11
SPTSSA-201ENST00000298130 F8WEM9 126 aa15.75■□□□□ 0.11
SPTSSA-201ENST00000298130 LYSTQ99698 3801 aa15.75■□□□□ 0.11
SPTSSA-201ENST00000298130 ERC2-IT1O76042 136 aa15.73■□□□□ 0.11
SPTSSA-201ENST00000298130 IGKV4-1P06312 121 aa15.73■□□□□ 0.11
SPTSSA-201ENST00000298130 A0A0G2JQZ4 141 aa15.71■□□□□ 0.11
SPTSSA-201ENST00000298130 A0A1W2PNN7 141 aa15.71■□□□□ 0.11
SPTSSA-201ENST00000298130 Q6ZRX8 168 aa15.71■□□□□ 0.11
SPTSSA-201ENST00000298130 ETDCA0A1B0GVM5 59 aa15.7■□□□□ 0.1
SPTSSA-201ENST00000298130 KLKP1Q107X0 134 aa15.7■□□□□ 0.1
SPTSSA-201ENST00000298130 DNAH10Q8IVF4 4471 aa15.69■□□□□ 0.1
SPTSSA-201ENST00000298130 IGLV1-50A0A075B6I6 118 aa15.69■□□□□ 0.1
SPTSSA-201ENST00000298130 A0A1W2PNM2 257 aa15.67■□□□□ 0.1
SPTSSA-201ENST00000298130 BCE1O60756 84 aa15.67■□□□□ 0.1
SPTSSA-201ENST00000298130 HRCT1Q6UXD1 115 aa15.66■□□□□ 0.1
SPTSSA-201ENST00000298130 KRTAP4-16G5E9R7 235 aaPredicted RBP15.66■□□□□ 0.1
SPTSSA-201ENST00000298130 Q5XG85 94 aa15.66■□□□□ 0.1
SPTSSA-201ENST00000298130 MGAM2Q2M2H8 2515 aa15.66■□□□□ 0.1
SPTSSA-201ENST00000298130 UBE2BP63146 152 aa15.65■□□□□ 0.1
SPTSSA-201ENST00000298130 DNAH1Q9P2D7 4330 aa15.64■□□□□ 0.09
SPTSSA-201ENST00000298130 IGLV5-48A0A075B6I7 105 aa15.64■□□□□ 0.09
SPTSSA-201ENST00000298130 C1orf137Q5JT78 98 aa15.64■□□□□ 0.09
SPTSSA-201ENST00000298130 DNAH3Q8TD57 4116 aa15.62■□□□□ 0.09
SPTSSA-201ENST00000298130 TLX1NBP0CAT3 122 aa15.62■□□□□ 0.09
SPTSSA-201ENST00000298130 DHRS4-AS1Q9P1J3 65 aa15.62■□□□□ 0.09
SPTSSA-201ENST00000298130 MRPL55Q7Z7F7 128 aaKnown RBP15.61■□□□□ 0.09
SPTSSA-201ENST00000298130 HUWE1Q7Z6Z7 4374 aaKnown RBP15.61■□□□□ 0.09
SPTSSA-201ENST00000298130 TMEM254Q8TBM7 123 aa15.61■□□□□ 0.09
SPTSSA-201ENST00000298130 IGKV2-24A0A0C4DH68 120 aa15.6■□□□□ 0.09
SPTSSA-201ENST00000298130 F8WDY8 70 aa15.6■□□□□ 0.09
SPTSSA-201ENST00000298130 FUSP35637 526 aaKnown RBP eCLIP15.6■□□□□ 0.09
SPTSSA-201ENST00000298130 STAB2Q8WWQ8 2551 aa15.59■□□□□ 0.09
SPTSSA-201ENST00000298130 SRRM2Q9UQ35 2752 aaKnown RBP15.59■□□□□ 0.09
SPTSSA-201ENST00000298130 PRYO14603 147 aa15.58■□□□□ 0.08
SPTSSA-201ENST00000298130 FAM30AQ9NZY2 134 aa15.57■□□□□ 0.08
SPTSSA-201ENST00000298130 SPRR1AP35321 89 aa15.57■□□□□ 0.08
SPTSSA-201ENST00000298130 SMIM29Q86T20 159 aa15.56■□□□□ 0.08
SPTSSA-201ENST00000298130 OCR1Q9BZK8 76 aa15.55■□□□□ 0.08
SPTSSA-201ENST00000298130 PLA2G2DQ9UNK4 145 aa15.55■□□□□ 0.08
SPTSSA-201ENST00000298130 TNP2Q05952 138 aa15.54■□□□□ 0.08
SPTSSA-201ENST00000298130 TENM2Q9NT68 2774 aa15.54■□□□□ 0.08
SPTSSA-201ENST00000298130 PRLHP81277 87 aa15.53■□□□□ 0.08
SPTSSA-201ENST00000298130 DEFB116Q30KQ4 102 aa15.53■□□□□ 0.08
SPTSSA-201ENST00000298130 C5orf47Q569G3 176 aa15.53■□□□□ 0.08
SPTSSA-201ENST00000298130 HIGD2AQ9BW72 106 aa15.53■□□□□ 0.08
SPTSSA-201ENST00000298130 SERP1Q9Y6X1 66 aa15.53■□□□□ 0.08
SPTSSA-201ENST00000298130 KRTAP1-5Q9BYS1 174 aa15.52■□□□□ 0.07
SPTSSA-201ENST00000298130 Q8NBF4 154 aa15.51■□□□□ 0.07
SPTSSA-201ENST00000298130 IGLV5-37A0A075B6J1 123 aa15.5■□□□□ 0.07
SPTSSA-201ENST00000298130 REG3GQ6UW15 175 aa15.5■□□□□ 0.07
SPTSSA-201ENST00000298130 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.49■□□□□ 0.07
SPTSSA-201ENST00000298130 A0A096LNI7 61 aa15.48■□□□□ 0.07
SPTSSA-201ENST00000298130 K7EIL1 84 aa15.48■□□□□ 0.07
SPTSSA-201ENST00000298130 EPM2AB3EWF7 344 aa15.47■□□□□ 0.07
SPTSSA-201ENST00000298130 LINC00474Q9P2X8 69 aa15.47■□□□□ 0.07
SPTSSA-201ENST00000298130 K7EQZ3 153 aa15.47■□□□□ 0.07
SPTSSA-201ENST00000298130 DNAH9Q9NYC9 4486 aa15.47■□□□□ 0.07
SPTSSA-201ENST00000298130 DSCR10P59022 87 aa15.45■□□□□ 0.06
SPTSSA-201ENST00000298130 LINC00476Q8WZB0 136 aa15.45■□□□□ 0.06
SPTSSA-201ENST00000298130 COL7A1Q02388 2944 aa15.45■□□□□ 0.06
SPTSSA-201ENST00000298130 A0A0U1RQV1 116 aa15.42■□□□□ 0.06
SPTSSA-201ENST00000298130 CHTF8P0CG12 524 aa15.42■□□□□ 0.06
SPTSSA-201ENST00000298130 FP248Q71RG6 208 aaPredicted RBP15.41■□□□□ 0.06
SPTSSA-201ENST00000298130 NDUFC1O43677 76 aa15.4■□□□□ 0.06
SPTSSA-201ENST00000298130 PSCAO43653 123 aa15.39■□□□□ 0.05
SPTSSA-201ENST00000298130 SPRR4Q96PI1 79 aa15.39■□□□□ 0.05
SPTSSA-201ENST00000298130 FAM229BQ4G0N7 80 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms