RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TMEM258P61165 79 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 OR13C6PQ8NH95 151 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 OBSCN-AS1Q96MR7 158 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 Q6JHZ5 121 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 DPH3Q96FX2 82 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
HMGB2-201ENST00000296503 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
HMGB2-201ENST00000296503 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
HMGB2-201ENST00000296503 SCXQ7RTU7 201 aa7.77□□□□□ -1.17
HMGB2-201ENST00000296503 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
HMGB2-201ENST00000296503 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
HMGB2-201ENST00000296503 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
HMGB2-201ENST00000296503 Q5VSD8 79 aa7.76□□□□□ -1.17
HMGB2-201ENST00000296503 CIRBP-AS1Q8TBR5 109 aa7.76□□□□□ -1.17
HMGB2-201ENST00000296503 H0YGX0 51 aa7.75□□□□□ -1.17
HMGB2-201ENST00000296503 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
HMGB2-201ENST00000296503 SERP2Q8N6R1 65 aa7.75□□□□□ -1.17
HMGB2-201ENST00000296503 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
HMGB2-201ENST00000296503 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
HMGB2-201ENST00000296503 COX6A2Q02221 97 aa7.75□□□□□ -1.17
HMGB2-201ENST00000296503 SYCNQ0VAF6 134 aa7.75□□□□□ -1.17
HMGB2-201ENST00000296503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
HMGB2-201ENST00000296503 LINC00242Q5T6M2 205 aa7.74□□□□□ -1.17
HMGB2-201ENST00000296503 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
HMGB2-201ENST00000296503 SMIM1B2RUZ4 78 aa7.73□□□□□ -1.17
HMGB2-201ENST00000296503 CAMK2N2Q96S95 79 aa7.73□□□□□ -1.17
HMGB2-201ENST00000296503 PANO1I0J062 215 aa7.72□□□□□ -1.17
HMGB2-201ENST00000296503 NPC2P61916 151 aa7.72□□□□□ -1.17
HMGB2-201ENST00000296503 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
HMGB2-201ENST00000296503 BCE1O60756 84 aa7.72□□□□□ -1.17
HMGB2-201ENST00000296503 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
HMGB2-201ENST00000296503 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
HMGB2-201ENST00000296503 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
HMGB2-201ENST00000296503 S100A7L2Q5SY68 101 aa7.71□□□□□ -1.18
HMGB2-201ENST00000296503 ATP5EP2Q5VTU8 51 aa7.71□□□□□ -1.18
HMGB2-201ENST00000296503 A0A087WZ39 114 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 DNAL4O96015 105 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
HMGB2-201ENST00000296503 Q6ZRU5 148 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 FAT1Q14517 4588 aa7.7□□□□□ -1.18
HMGB2-201ENST00000296503 A0A087WYN8 130 aa7.69□□□□□ -1.18
HMGB2-201ENST00000296503 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
HMGB2-201ENST00000296503 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
HMGB2-201ENST00000296503 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
HMGB2-201ENST00000296503 A0A096LNI7 61 aa7.68□□□□□ -1.18
HMGB2-201ENST00000296503 NDUFC2O95298 119 aa7.68□□□□□ -1.18
HMGB2-201ENST00000296503 F8WDY8 70 aa7.67□□□□□ -1.18
HMGB2-201ENST00000296503 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
HMGB2-201ENST00000296503 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
HMGB2-201ENST00000296503 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
HMGB2-201ENST00000296503 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
HMGB2-201ENST00000296503 LINC00167Q96N53 147 aa7.66□□□□□ -1.18
HMGB2-201ENST00000296503 SRRM2Q9UQ35 2752 aaKnown RBP7.65□□□□□ -1.18
HMGB2-201ENST00000296503 KIAA0087Q14695 138 aa7.65□□□□□ -1.18
HMGB2-201ENST00000296503 C6orf226Q5I0X4 101 aa7.65□□□□□ -1.18
HMGB2-201ENST00000296503 PLAC8Q9NZF1 115 aa7.65□□□□□ -1.18
HMGB2-201ENST00000296503 JMJD7-PLA2G4BH0Y9G9 81 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 CCKP06307 115 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 IGKV2-28A0A075B6P5 120 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 IGKV2D-28P01615 120 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
HMGB2-201ENST00000296503 LINC00337Q8N6G1 96 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 SND1-IT1Q9HBX3 110 aa7.64□□□□□ -1.19
HMGB2-201ENST00000296503 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
HMGB2-201ENST00000296503 SMIM11BQ8TCY0 68 aa7.63□□□□□ -1.19
HMGB2-201ENST00000296503 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
HMGB2-201ENST00000296503 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
HMGB2-201ENST00000296503 Q8IZM0 81 aa7.62□□□□□ -1.19
HMGB2-201ENST00000296503 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
HMGB2-201ENST00000296503 C7orf33Q8WU49 177 aa7.62□□□□□ -1.19
HMGB2-201ENST00000296503 PCLOQ9Y6V0 5065 aa7.61□□□□□ -1.19
HMGB2-201ENST00000296503 ORMDL1Q9P0S3 153 aa7.61□□□□□ -1.19
HMGB2-201ENST00000296503 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
HMGB2-201ENST00000296503 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
HMGB2-201ENST00000296503 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
HMGB2-201ENST00000296503 Q5XG85 94 aa7.6□□□□□ -1.19
HMGB2-201ENST00000296503 IGKV3D-7A0A0C4DH55 119 aa7.59□□□□□ -1.19
HMGB2-201ENST00000296503 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
HMGB2-201ENST00000296503 TLX1NBP0CAT3 122 aa7.59□□□□□ -1.19
HMGB2-201ENST00000296503 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
HMGB2-201ENST00000296503 C9orf116Q5BN46 136 aaPredicted RBP7.59□□□□□ -1.19
HMGB2-201ENST00000296503 Q6ZRP5 223 aa7.59□□□□□ -1.19
HMGB2-201ENST00000296503 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.2
HMGB2-201ENST00000296503 A0A0U1RRA0 63 aa7.58□□□□□ -1.2
HMGB2-201ENST00000296503 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
HMGB2-201ENST00000296503 C9orf129Q5T035 196 aaKnown RBP7.57□□□□□ -1.2
HMGB2-201ENST00000296503 OXTP01178 125 aa7.56□□□□□ -1.2
HMGB2-201ENST00000296503 H3BQ85 93 aa7.55□□□□□ -1.2
HMGB2-201ENST00000296503 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
HMGB2-201ENST00000296503 LINC00158P58513 81 aa7.55□□□□□ -1.2
HMGB2-201ENST00000296503 GHRHP01286 108 aa7.54□□□□□ -1.2
HMGB2-201ENST00000296503 DSCR8Q96T75 97 aa7.54□□□□□ -1.2
HMGB2-201ENST00000296503 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
HMGB2-201ENST00000296503 A0A087WVE0 104 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms