RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SPANXB1Q9NS25 103 aaPredicted RBP5.66□□□□□ -1.5
PTPDC1-201ENST00000288976 SS18L2Q9UHA2 77 aa5.66□□□□□ -1.5
PTPDC1-201ENST00000288976 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
PTPDC1-201ENST00000288976 C3orf22Q8N5N4 141 aa5.65□□□□□ -1.5
PTPDC1-201ENST00000288976 ZNF73O43830 326 aaPredicted RBP5.65□□□□□ -1.5
PTPDC1-201ENST00000288976 NBDYA0A0U1RRE5 68 aa5.65□□□□□ -1.51
PTPDC1-201ENST00000288976 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.51
PTPDC1-201ENST00000288976 SPINK1P00995 79 aa5.64□□□□□ -1.51
PTPDC1-201ENST00000288976 WFDC2Q14508 124 aa5.64□□□□□ -1.51
PTPDC1-201ENST00000288976 TRBV10-3A0A0K0K1G6 114 aa5.64□□□□□ -1.51
PTPDC1-201ENST00000288976 Q8N3U1 123 aa5.64□□□□□ -1.51
PTPDC1-201ENST00000288976 LST1O00453 97 aa5.64□□□□□ -1.51
PTPDC1-201ENST00000288976 Q6ZRU5 148 aa5.64□□□□□ -1.51
PTPDC1-201ENST00000288976 KRTAP26-1Q6PEX3 210 aa5.63□□□□□ -1.51
PTPDC1-201ENST00000288976 TMEM223A0PJW6 202 aa5.63□□□□□ -1.51
PTPDC1-201ENST00000288976 F8WDY8 70 aa5.63□□□□□ -1.51
PTPDC1-201ENST00000288976 Q6ZVQ6 151 aa5.63□□□□□ -1.51
PTPDC1-201ENST00000288976 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
PTPDC1-201ENST00000288976 Q6ZR54 194 aa5.63□□□□□ -1.51
PTPDC1-201ENST00000288976 IGHV6-1A0A0B4J1U7 121 aa5.62□□□□□ -1.51
PTPDC1-201ENST00000288976 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
PTPDC1-201ENST00000288976 F8W1H4 67 aa5.62□□□□□ -1.51
PTPDC1-201ENST00000288976 FRAS1Q86XX4 4008 aa5.62□□□□□ -1.51
PTPDC1-201ENST00000288976 DNAH2Q9P225 4427 aa5.62□□□□□ -1.51
PTPDC1-201ENST00000288976 IGLV5-39A0A0G2JS06 123 aa5.62□□□□□ -1.51
PTPDC1-201ENST00000288976 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
PTPDC1-201ENST00000288976 REG3GQ6UW15 175 aa5.61□□□□□ -1.51
PTPDC1-201ENST00000288976 DHRS4-AS1Q9P1J3 65 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 A0A087WSZ3 146 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 MAPKAPK5-AS1Q8N8E1 139 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 KRTAP1-5Q9BYS1 174 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 DNAH17Q9UFH2 4485 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
PTPDC1-201ENST00000288976 LCE6AA0A183 80 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 NDUFC2-KCTD14E9PQ53 114 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 PRYO14603 147 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 Q8IZM0 81 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 RTL8CO15255 209 aa5.59□□□□□ -1.51
PTPDC1-201ENST00000288976 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
PTPDC1-201ENST00000288976 Q6ZRN7 208 aaPredicted RBP5.58□□□□□ -1.52
PTPDC1-201ENST00000288976 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
PTPDC1-201ENST00000288976 Q9BRP9 147 aa5.58□□□□□ -1.52
PTPDC1-201ENST00000288976 PDE6GP18545 87 aa5.58□□□□□ -1.52
PTPDC1-201ENST00000288976 A0A0B4J2C4 111 aa5.58□□□□□ -1.52
PTPDC1-201ENST00000288976 SACSQ9NZJ4 4579 aa5.57□□□□□ -1.52
PTPDC1-201ENST00000288976 SDIM1Q6ZPB5 146 aa5.57□□□□□ -1.52
PTPDC1-201ENST00000288976 Q8N9L7 120 aa5.57□□□□□ -1.52
PTPDC1-201ENST00000288976 MOBPQ13875 183 aa5.57□□□□□ -1.52
PTPDC1-201ENST00000288976 TMEM258P61165 79 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 C22orf24Q9Y442 160 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 TRIAP1O43715 76 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
PTPDC1-201ENST00000288976 TRBV30A0A0K0K1B3 111 aa5.55□□□□□ -1.52
PTPDC1-201ENST00000288976 B5MCH6 92 aa5.55□□□□□ -1.52
PTPDC1-201ENST00000288976 H3BQ85 93 aa5.55□□□□□ -1.52
PTPDC1-201ENST00000288976 C2orf91Q6ZV80 131 aa5.55□□□□□ -1.52
PTPDC1-201ENST00000288976 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
PTPDC1-201ENST00000288976 NDUFV3P56181 108 aaKnown RBP5.55□□□□□ -1.52
PTPDC1-201ENST00000288976 SMCR5Q8TEV8 140 aa5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 DNAH10Q8IVF4 4471 aa5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 H3BT86 120 aa5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 CRYGAP11844 174 aa5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
PTPDC1-201ENST00000288976 TIMM17BO60830 172 aa5.53□□□□□ -1.52
PTPDC1-201ENST00000288976 TSPEAR-AS2P59090 65 aa5.53□□□□□ -1.52
PTPDC1-201ENST00000288976 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
PTPDC1-201ENST00000288976 COX17Q14061 63 aa5.53□□□□□ -1.52
PTPDC1-201ENST00000288976 RYR2Q92736 4967 aa5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 LINC01547P58512 204 aaPredicted RBP5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 FAT2Q9NYQ8 4349 aa5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 K7ERS5 55 aa5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
PTPDC1-201ENST00000288976 A0A087WYN8 130 aa5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 SERP1Q9Y6X1 66 aa5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 HYDINQ4G0P3 5121 aa5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 RPL37AP61513 92 aaKnown RBP5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 LINC00336Q6ZUF6 198 aa5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 LINC00167Q96N53 147 aa5.51□□□□□ -1.53
PTPDC1-201ENST00000288976 Q8N814 137 aa5.5□□□□□ -1.53
PTPDC1-201ENST00000288976 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
PTPDC1-201ENST00000288976 SMIM20Q8N5G0 67 aa5.5□□□□□ -1.53
PTPDC1-201ENST00000288976 Q6ZRP5 223 aa5.5□□□□□ -1.53
PTPDC1-201ENST00000288976 A0A087WTM6 91 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms