RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
CACNA1D-201ENST00000288139 LY6G6DO95868 133 aa5.98□□□□□ -1.45
CACNA1D-201ENST00000288139 A0A087WSZ3 146 aa5.98□□□□□ -1.45
CACNA1D-201ENST00000288139 APLNQ9ULZ1 77 aa5.97□□□□□ -1.45
CACNA1D-201ENST00000288139 SETXQ7Z333 2677 aaKnown RBP5.97□□□□□ -1.45
CACNA1D-201ENST00000288139 IGHV3OR16-9A0A0B4J2B5 98 aa5.96□□□□□ -1.45
CACNA1D-201ENST00000288139 C16orf90A8MZG2 172 aa5.96□□□□□ -1.46
CACNA1D-201ENST00000288139 SMCPP49901 116 aaPredicted RBP5.96□□□□□ -1.46
CACNA1D-201ENST00000288139 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
CACNA1D-201ENST00000288139 A0A1W2PNU3 283 aaPredicted RBP5.95□□□□□ -1.46
CACNA1D-201ENST00000288139 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
CACNA1D-201ENST00000288139 UQCR11O14957 56 aa5.95□□□□□ -1.46
CACNA1D-201ENST00000288139 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
CACNA1D-201ENST00000288139 DSPP15924 2871 aaKnown RBP5.94□□□□□ -1.46
CACNA1D-201ENST00000288139 MOBPQ13875 183 aa5.94□□□□□ -1.46
CACNA1D-201ENST00000288139 H3BNG1 76 aa5.94□□□□□ -1.46
CACNA1D-201ENST00000288139 IGLV8-61A0A075B6I0 122 aa5.94□□□□□ -1.46
CACNA1D-201ENST00000288139 NBEAQ8NFP9 2946 aa5.94□□□□□ -1.46
CACNA1D-201ENST00000288139 DCHS2Q6V1P9 2916 aa5.94□□□□□ -1.46
CACNA1D-201ENST00000288139 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 COX6A2Q02221 97 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 C11orf72Q8NBR9 251 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 ITPR1Q14643 2758 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 LOC400499M0QZD8 3231 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 LINC00315P59091 139 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 Q6ZRP5 223 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 GRNP28799 593 aaKnown RBP5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
CACNA1D-201ENST00000288139 FREM2Q5SZK8 3169 aa5.92□□□□□ -1.46
CACNA1D-201ENST00000288139 GAS8-AS1O95177 125 aa5.92□□□□□ -1.46
CACNA1D-201ENST00000288139 IGLV1-51P01701 117 aa5.92□□□□□ -1.46
CACNA1D-201ENST00000288139 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
CACNA1D-201ENST00000288139 SMG1Q96Q15 3661 aaKnown RBP5.91□□□□□ -1.46
CACNA1D-201ENST00000288139 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
CACNA1D-201ENST00000288139 A0A087WYN8 130 aa5.91□□□□□ -1.46
CACNA1D-201ENST00000288139 DMXL1Q9Y485 3027 aa5.9□□□□□ -1.46
CACNA1D-201ENST00000288139 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.47
CACNA1D-201ENST00000288139 Q96NJ1 140 aa5.9□□□□□ -1.47
CACNA1D-201ENST00000288139 ZZEF1O43149 2961 aa5.89□□□□□ -1.47
CACNA1D-201ENST00000288139 RPL37AP61513 92 aaKnown RBP5.89□□□□□ -1.47
CACNA1D-201ENST00000288139 CDC42SE1Q9NRR8 79 aa5.89□□□□□ -1.47
CACNA1D-201ENST00000288139 ODF3L2Q3SX64 289 aa5.89□□□□□ -1.47
CACNA1D-201ENST00000288139 Q6ZQT0 140 aa5.89□□□□□ -1.47
CACNA1D-201ENST00000288139 A8MTW9 85 aa5.88□□□□□ -1.47
CACNA1D-201ENST00000288139 Q8NBF4 154 aa5.88□□□□□ -1.47
CACNA1D-201ENST00000288139 A0A087WVE0 104 aa5.88□□□□□ -1.47
CACNA1D-201ENST00000288139 CD164Q04900 197 aa5.88□□□□□ -1.47
CACNA1D-201ENST00000288139 TRBV7-4A0A0J9YYF1 115 aa5.88□□□□□ -1.47
CACNA1D-201ENST00000288139 IGLV4-60A0A075B6I1 120 aa5.87□□□□□ -1.47
CACNA1D-201ENST00000288139 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
CACNA1D-201ENST00000288139 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
CACNA1D-201ENST00000288139 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
CACNA1D-201ENST00000288139 LITAFQ99732 161 aa5.87□□□□□ -1.47
CACNA1D-201ENST00000288139 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
CACNA1D-201ENST00000288139 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
CACNA1D-201ENST00000288139 DEFB1P60022 68 aa5.86□□□□□ -1.47
CACNA1D-201ENST00000288139 DEFB116Q30KQ4 102 aa5.86□□□□□ -1.47
CACNA1D-201ENST00000288139 UTP20O75691 2785 aaKnown RBP5.86□□□□□ -1.47
CACNA1D-201ENST00000288139 FLNCQ14315 2725 aa5.86□□□□□ -1.47
CACNA1D-201ENST00000288139 PROK1P58294 105 aa5.85□□□□□ -1.47
CACNA1D-201ENST00000288139 LINC01006Q8NI28 216 aa5.85□□□□□ -1.47
CACNA1D-201ENST00000288139 C16orf95Q9H693 158 aa5.85□□□□□ -1.47
CACNA1D-201ENST00000288139 PSORS1C2Q9UIG4 136 aa5.85□□□□□ -1.47
CACNA1D-201ENST00000288139 C19orf84I3L1E1 186 aa5.84□□□□□ -1.47
CACNA1D-201ENST00000288139 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
CACNA1D-201ENST00000288139 C9orf116Q5BN46 136 aaPredicted RBP5.84□□□□□ -1.48
CACNA1D-201ENST00000288139 HRES1P13985 223 aa5.84□□□□□ -1.48
CACNA1D-201ENST00000288139 SMCR5Q8TEV8 140 aa5.83□□□□□ -1.48
CACNA1D-201ENST00000288139 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
CACNA1D-201ENST00000288139 PRO3102Q9H379 93 aa5.82□□□□□ -1.48
CACNA1D-201ENST00000288139 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
CACNA1D-201ENST00000288139 IGLV5-37A0A075B6J1 123 aa5.82□□□□□ -1.48
CACNA1D-201ENST00000288139 LINC00167Q96N53 147 aa5.82□□□□□ -1.48
CACNA1D-201ENST00000288139 M0R2T5 61 aa5.82□□□□□ -1.48
CACNA1D-201ENST00000288139 Q6ZRX8 168 aa5.81□□□□□ -1.48
CACNA1D-201ENST00000288139 PRR15Q8IV56 129 aa5.81□□□□□ -1.48
CACNA1D-201ENST00000288139 NIPBLQ6KC79 2804 aaeCLIP5.81□□□□□ -1.48
CACNA1D-201ENST00000288139 ITPR2Q14571 2701 aa5.81□□□□□ -1.48
CACNA1D-201ENST00000288139 FHL3Q13643 280 aa5.8□□□□□ -1.48
CACNA1D-201ENST00000288139 C22orf24Q9Y442 160 aa5.8□□□□□ -1.48
CACNA1D-201ENST00000288139 Q9UF83 564 aa5.8□□□□□ -1.48
CACNA1D-201ENST00000288139 SMIM29Q86T20 159 aa5.79□□□□□ -1.48
CACNA1D-201ENST00000288139 H7BZZ5 65 aa5.78□□□□□ -1.48
CACNA1D-201ENST00000288139 LINC00304Q8N9R0 145 aa5.78□□□□□ -1.48
CACNA1D-201ENST00000288139 CELSR2Q9HCU4 2923 aa5.77□□□□□ -1.49
CACNA1D-201ENST00000288139 UBR5O95071 2799 aaPredicted RBP5.77□□□□□ -1.49
CACNA1D-201ENST00000288139 BOD1L1Q8NFC6 3051 aa5.76□□□□□ -1.49
CACNA1D-201ENST00000288139 RELNP78509 3460 aa5.76□□□□□ -1.49
CACNA1D-201ENST00000288139 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
CACNA1D-201ENST00000288139 RTL8CO15255 209 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 DCHS1Q96JQ0 3298 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 Q1T7F1 81 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 WWC2-AS2Q96NR7 200 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 PRR3P79522 188 aaKnown RBP5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 FAM218AQ96MZ4 157 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 ATMQ13315 3056 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 DMXL2Q8TDJ6 3036 aa5.75□□□□□ -1.49
CACNA1D-201ENST00000288139 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
CACNA1D-201ENST00000288139 A8MWP4 228 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms