RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ESRGQ1W209 222 aa10.69□□□□□ -0.7
USP43-201ENST00000285199 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
USP43-201ENST00000285199 PMAIP1Q13794 54 aa10.68□□□□□ -0.7
USP43-201ENST00000285199 DHRS4-AS1Q9P1J3 65 aa10.68□□□□□ -0.7
USP43-201ENST00000285199 CXCL6P80162 114 aa10.67□□□□□ -0.7
USP43-201ENST00000285199 X6R8D5 127 aa10.67□□□□□ -0.7
USP43-201ENST00000285199 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
USP43-201ENST00000285199 DCHS2Q6V1P9 2916 aa10.67□□□□□ -0.7
USP43-201ENST00000285199 PRLHP81277 87 aa10.66□□□□□ -0.7
USP43-201ENST00000285199 PCOTHQ58A44 107 aa10.66□□□□□ -0.7
USP43-201ENST00000285199 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
USP43-201ENST00000285199 CELSR1Q9NYQ6 3014 aa10.63□□□□□ -0.71
USP43-201ENST00000285199 ST20-AS1Q8NBB2 130 aa10.63□□□□□ -0.71
USP43-201ENST00000285199 STAB1Q9NY15 2570 aa10.63□□□□□ -0.71
USP43-201ENST00000285199 C7orf33Q8WU49 177 aa10.62□□□□□ -0.71
USP43-201ENST00000285199 PRR15LQ9BU68 103 aa10.62□□□□□ -0.71
USP43-201ENST00000285199 A0A0G2JQZ4 141 aa10.62□□□□□ -0.71
USP43-201ENST00000285199 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
USP43-201ENST00000285199 PLAC8L1A1L4L8 177 aa10.62□□□□□ -0.71
USP43-201ENST00000285199 HIVEP1P15822 2718 aa10.62□□□□□ -0.71
USP43-201ENST00000285199 H7BZZ5 65 aa10.61□□□□□ -0.71
USP43-201ENST00000285199 MRPL55Q7Z7F7 128 aaKnown RBP10.61□□□□□ -0.71
USP43-201ENST00000285199 HRNRQ86YZ3 2850 aaPredicted RBP10.61□□□□□ -0.71
USP43-201ENST00000285199 NSD1Q96L73 2696 aaPredicted RBP10.59□□□□□ -0.71
USP43-201ENST00000285199 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
USP43-201ENST00000285199 ELOF1P60002 83 aaKnown RBP10.57□□□□□ -0.72
USP43-201ENST00000285199 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
USP43-201ENST00000285199 LOC110117498A0A087WWA1 95 aa10.57□□□□□ -0.72
USP43-201ENST00000285199 C22orf24Q9Y442 160 aa10.55□□□□□ -0.72
USP43-201ENST00000285199 APCP25054 2843 aa10.55□□□□□ -0.72
USP43-201ENST00000285199 A0A096LNT2 108 aa10.55□□□□□ -0.72
USP43-201ENST00000285199 RPL37AP61513 92 aaKnown RBP10.54□□□□□ -0.72
USP43-201ENST00000285199 Q6ZRP5 223 aa10.54□□□□□ -0.72
USP43-201ENST00000285199 IGLV6-57P01721 117 aa10.54□□□□□ -0.72
USP43-201ENST00000285199 LINC00167Q96N53 147 aa10.54□□□□□ -0.72
USP43-201ENST00000285199 CASC2Q6XLA1 102 aa10.54□□□□□ -0.72
USP43-201ENST00000285199 REG3GQ6UW15 175 aa10.53□□□□□ -0.72
USP43-201ENST00000285199 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
USP43-201ENST00000285199 FAM168BA1KXE4 195 aa10.53□□□□□ -0.72
USP43-201ENST00000285199 SPENQ96T58 3664 aaKnown RBP10.53□□□□□ -0.72
USP43-201ENST00000285199 ITPR2Q14571 2701 aa10.52□□□□□ -0.72
USP43-201ENST00000285199 H0Y9P7 68 aa10.52□□□□□ -0.73
USP43-201ENST00000285199 FSHBP01225 129 aa10.52□□□□□ -0.73
USP43-201ENST00000285199 Q9BRP9 147 aa10.52□□□□□ -0.73
USP43-201ENST00000285199 VPREB1P12018 145 aa10.51□□□□□ -0.73
USP43-201ENST00000285199 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
USP43-201ENST00000285199 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
USP43-201ENST00000285199 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
USP43-201ENST00000285199 C16orf95Q9H693 158 aa10.5□□□□□ -0.73
USP43-201ENST00000285199 KLKP1Q107X0 134 aa10.49□□□□□ -0.73
USP43-201ENST00000285199 K7EQZ3 153 aa10.48□□□□□ -0.73
USP43-201ENST00000285199 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
USP43-201ENST00000285199 Q8NDZ9 215 aa10.47□□□□□ -0.73
USP43-201ENST00000285199 IGHV6-1A0A0B4J1U7 121 aa10.47□□□□□ -0.73
USP43-201ENST00000285199 RETNLBQ9BQ08 111 aa10.47□□□□□ -0.73
USP43-201ENST00000285199 Q8NAQ8 132 aa10.46□□□□□ -0.74
USP43-201ENST00000285199 OXTP01178 125 aa10.45□□□□□ -0.74
USP43-201ENST00000285199 SEC61GP60059 68 aa10.45□□□□□ -0.74
USP43-201ENST00000285199 A8MUN3 132 aa10.45□□□□□ -0.74
USP43-201ENST00000285199 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
USP43-201ENST00000285199 Q8NBF4 154 aa10.44□□□□□ -0.74
USP43-201ENST00000285199 C1orf64Q8NEQ6 169 aa10.44□□□□□ -0.74
USP43-201ENST00000285199 OBSCN-AS1Q96MR7 158 aa10.44□□□□□ -0.74
USP43-201ENST00000285199 BCE1O60756 84 aa10.44□□□□□ -0.74
USP43-201ENST00000285199 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
USP43-201ENST00000285199 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
USP43-201ENST00000285199 MXRA5Q9NR99 2828 aa10.43□□□□□ -0.74
USP43-201ENST00000285199 Q6ZRX8 168 aa10.41□□□□□ -0.74
USP43-201ENST00000285199 Q8N377 158 aa10.4□□□□□ -0.74
USP43-201ENST00000285199 SPAG11AQ6PDA7 123 aa10.39□□□□□ -0.75
USP43-201ENST00000285199 Q5XG85 94 aa10.37□□□□□ -0.75
USP43-201ENST00000285199 CHTF8P0CG12 524 aa10.37□□□□□ -0.75
USP43-201ENST00000285199 LINC01556Q5JQF7 62 aa10.35□□□□□ -0.75
USP43-201ENST00000285199 STAB2Q8WWQ8 2551 aa10.34□□□□□ -0.75
USP43-201ENST00000285199 C14orf177Q52M58 125 aa10.34□□□□□ -0.75
USP43-201ENST00000285199 ERC2-IT1O76042 136 aa10.33□□□□□ -0.76
USP43-201ENST00000285199 KRTAP10-3P60369 221 aa10.33□□□□□ -0.76
USP43-201ENST00000285199 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
USP43-201ENST00000285199 C15orf56Q8N910 161 aa10.33□□□□□ -0.76
USP43-201ENST00000285199 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
USP43-201ENST00000285199 PRR34Q9NV39 138 aa10.33□□□□□ -0.76
USP43-201ENST00000285199 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
USP43-201ENST00000285199 CIRBP-AS1Q8TBR5 109 aa10.32□□□□□ -0.76
USP43-201ENST00000285199 A0A1W2PNM2 257 aa10.31□□□□□ -0.76
USP43-201ENST00000285199 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
USP43-201ENST00000285199 FAM229BQ4G0N7 80 aa10.31□□□□□ -0.76
USP43-201ENST00000285199 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
USP43-201ENST00000285199 FP248Q71RG6 208 aaPredicted RBP10.29□□□□□ -0.76
USP43-201ENST00000285199 TRAV22A0A0B4J277 110 aa10.26□□□□□ -0.77
USP43-201ENST00000285199 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
USP43-201ENST00000285199 SPINK1P00995 79 aa10.26□□□□□ -0.77
USP43-201ENST00000285199 LINC00588Q9Y4M8 146 aa10.26□□□□□ -0.77
USP43-201ENST00000285199 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
USP43-201ENST00000285199 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
USP43-201ENST00000285199 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
USP43-201ENST00000285199 IGFL1Q6UW32 110 aa10.24□□□□□ -0.77
USP43-201ENST00000285199 IGLV1-50A0A075B6I6 118 aa10.23□□□□□ -0.77
USP43-201ENST00000285199 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
USP43-201ENST00000285199 OCR1Q9BZK8 76 aa10.23□□□□□ -0.77
USP43-201ENST00000285199 MOBPQ13875 183 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms