RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CHTF8P0CG12 524 aa3.93□□□□□ -1.78
TNFSF4-201ENST00000281834 UBE2BP63146 152 aa3.93□□□□□ -1.78
TNFSF4-201ENST00000281834 ETDCA0A1B0GVM5 59 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 CCKP06307 115 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 DNAH9Q9NYC9 4486 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 MUC7Q8TAX7 377 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 LINC00167Q96N53 147 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 PKIGQ9Y2B9 76 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 DNAH3Q8TD57 4116 aa3.92□□□□□ -1.78
TNFSF4-201ENST00000281834 A0A1B0GX51 115 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 MEGF8Q7Z7M0 2845 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 C3orf84H3BNL1 204 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 ST20-AS1Q8NBB2 130 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 UBL5Q9BZL1 73 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 HIGD2AQ9BW72 106 aa3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 PLECQ15149 4684 aaKnown RBP3.91□□□□□ -1.78
TNFSF4-201ENST00000281834 A0A096LNI7 61 aa3.9□□□□□ -1.78
TNFSF4-201ENST00000281834 A0A0U1RQV1 116 aa3.9□□□□□ -1.78
TNFSF4-201ENST00000281834 PRLHP81277 87 aa3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 B9D2Q9BPU9 175 aa3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 PRKDCP78527 4128 aaKnown RBP3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 A0A0G2JQZ4 141 aa3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 A0A1W2PNN7 141 aa3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 MRPL55Q7Z7F7 128 aaKnown RBP3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 LINC00528Q8N1L1 170 aa3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 OBSCN-AS1Q96MR7 158 aa3.9□□□□□ -1.79
TNFSF4-201ENST00000281834 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 APLNQ9ULZ1 77 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 Q6ZQT0 140 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 DNAH7Q8WXX0 4024 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 ERC2-IT1O76042 136 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 KRTAP7-1Q8IUC3 87 aa3.89□□□□□ -1.79
TNFSF4-201ENST00000281834 Q6Q795 121 aa3.88□□□□□ -1.79
TNFSF4-201ENST00000281834 Q8N9L7 120 aa3.88□□□□□ -1.79
TNFSF4-201ENST00000281834 UPK3BQ9BT76 320 aa3.88□□□□□ -1.79
TNFSF4-201ENST00000281834 PHF5AQ7RTV0 110 aaKnown RBP3.87□□□□□ -1.79
TNFSF4-201ENST00000281834 Q9BRP9 147 aa3.87□□□□□ -1.79
TNFSF4-201ENST00000281834 IGLV1-50A0A075B6I6 118 aa3.87□□□□□ -1.79
TNFSF4-201ENST00000281834 KCNQ1DNQ9H478 68 aa3.87□□□□□ -1.79
TNFSF4-201ENST00000281834 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
TNFSF4-201ENST00000281834 Q6ZVQ6 151 aa3.87□□□□□ -1.79
TNFSF4-201ENST00000281834 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 Q6JHZ5 121 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 Q6ZRX8 168 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 Q8N377 158 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 REG3GQ6UW15 175 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 GHRHP01286 108 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 IMUPQ9GZP8 106 aa3.86□□□□□ -1.79
TNFSF4-201ENST00000281834 NUPR2A6NF83 97 aa3.85□□□□□ -1.79
TNFSF4-201ENST00000281834 TLX1NBP0CAT3 122 aa3.85□□□□□ -1.79
TNFSF4-201ENST00000281834 LINC01547P58512 204 aaPredicted RBP3.85□□□□□ -1.79
TNFSF4-201ENST00000281834 C16orf90A8MZG2 172 aa3.84□□□□□ -1.79
TNFSF4-201ENST00000281834 F8WDY8 70 aa3.84□□□□□ -1.79
TNFSF4-201ENST00000281834 PANO1I0J062 215 aa3.84□□□□□ -1.79
TNFSF4-201ENST00000281834 LY6G6CO95867 125 aa3.84□□□□□ -1.79
TNFSF4-201ENST00000281834 NREPQ16612 68 aa3.84□□□□□ -1.8
TNFSF4-201ENST00000281834 DEFB116Q30KQ4 102 aa3.84□□□□□ -1.8
TNFSF4-201ENST00000281834 DHRS4-AS1Q9P1J3 65 aa3.84□□□□□ -1.8
TNFSF4-201ENST00000281834 LOC110117498A0A087WWA1 95 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 TRBV7-6A0A0J9YX20 115 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 TRBV7-4A0A0J9YYF1 115 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 PRYO14603 147 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 J3KT08 172 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 C4orf26Q17RF5 130 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 C1orf137Q5JT78 98 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 ATOX1O00244 68 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 UBE2AP49459 152 aa3.83□□□□□ -1.8
TNFSF4-201ENST00000281834 F8WEM9 126 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 BPY2O14599 106 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 PDE6GP18545 87 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 C5orf47Q569G3 176 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 KMT2AQ03164 3969 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 DNAH1Q9P2D7 4330 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
TNFSF4-201ENST00000281834 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
TNFSF4-201ENST00000281834 C20orf197Q8N268 126 aa3.81□□□□□ -1.8
TNFSF4-201ENST00000281834 MPLKIPQ8TAP9 179 aa3.81□□□□□ -1.8
TNFSF4-201ENST00000281834 EPM2AB3EWF7 344 aa3.81□□□□□ -1.8
TNFSF4-201ENST00000281834 CNBPP62633 177 aaKnown RBP3.81□□□□□ -1.8
TNFSF4-201ENST00000281834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.81□□□□□ -1.8
TNFSF4-201ENST00000281834 LRCOL1A6NCL2 159 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 C9orf163Q8N9P6 203 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 PLA2G2DQ9UNK4 145 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 H3BQ85 93 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 UQCRQO14949 82 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 COX7CP15954 63 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 A0A1W2PNM2 257 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 SPRR1AP35321 89 aa3.8□□□□□ -1.8
TNFSF4-201ENST00000281834 IGLV5-37A0A075B6J1 123 aa3.79□□□□□ -1.8
TNFSF4-201ENST00000281834 ATP5EP2Q5VTU8 51 aa3.79□□□□□ -1.8
TNFSF4-201ENST00000281834 LINC00476Q8WZB0 136 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms