RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TRAV10A0A0B4J240 114 aa16.42■□□□□ 0.22
ROM1-201ENST00000278833 KCNQ1DNQ9H478 68 aa16.39■□□□□ 0.22
ROM1-201ENST00000278833 DNAH9Q9NYC9 4486 aa16.39■□□□□ 0.21
ROM1-201ENST00000278833 BCE1O60756 84 aa16.39■□□□□ 0.21
ROM1-201ENST00000278833 TGP01266 2768 aa16.38■□□□□ 0.21
ROM1-201ENST00000278833 B9D2Q9BPU9 175 aa16.37■□□□□ 0.21
ROM1-201ENST00000278833 COL7A1Q02388 2944 aa16.37■□□□□ 0.21
ROM1-201ENST00000278833 IGLV5-37A0A075B6J1 123 aa16.37■□□□□ 0.21
ROM1-201ENST00000278833 Q6ZVQ6 151 aa16.37■□□□□ 0.21
ROM1-201ENST00000278833 M0R2N4 97 aa16.36■□□□□ 0.21
ROM1-201ENST00000278833 CXCL6P80162 114 aa16.36■□□□□ 0.21
ROM1-201ENST00000278833 UPK3BQ9BT76 320 aa16.36■□□□□ 0.21
ROM1-201ENST00000278833 TM2D3Q9BRN9 247 aa16.35■□□□□ 0.21
ROM1-201ENST00000278833 LINC01547P58512 204 aaPredicted RBP16.33■□□□□ 0.21
ROM1-201ENST00000278833 FAM19A1Q7Z5A9 133 aa16.33■□□□□ 0.21
ROM1-201ENST00000278833 NKAPP1Q8N9T2 125 aa16.32■□□□□ 0.2
ROM1-201ENST00000278833 LINC00588Q9Y4M8 146 aa16.32■□□□□ 0.2
ROM1-201ENST00000278833 RMI2Q96E14 147 aa16.31■□□□□ 0.2
ROM1-201ENST00000278833 HUWE1Q7Z6Z7 4374 aaKnown RBP16.3■□□□□ 0.2
ROM1-201ENST00000278833 C7orf33Q8WU49 177 aa16.3■□□□□ 0.2
ROM1-201ENST00000278833 SERTAD4-AS1Q5TG53 156 aa16.29■□□□□ 0.2
ROM1-201ENST00000278833 TENM3Q9P273 2699 aa16.28■□□□□ 0.2
ROM1-201ENST00000278833 PRYO14603 147 aa16.27■□□□□ 0.19
ROM1-201ENST00000278833 SPRR1AP35321 89 aa16.25■□□□□ 0.19
ROM1-201ENST00000278833 DNAH1Q9P2D7 4330 aa16.23■□□□□ 0.19
ROM1-201ENST00000278833 KRTAP4-16G5E9R7 235 aaPredicted RBP16.22■□□□□ 0.19
ROM1-201ENST00000278833 SMIM20Q8N5G0 67 aa16.22■□□□□ 0.19
ROM1-201ENST00000278833 DHRS4-AS1Q9P1J3 65 aa16.22■□□□□ 0.19
ROM1-201ENST00000278833 TMEM258P61165 79 aa16.22■□□□□ 0.19
ROM1-201ENST00000278833 HAMPP81172 84 aa16.21■□□□□ 0.19
ROM1-201ENST00000278833 STAB2Q8WWQ8 2551 aa16.21■□□□□ 0.18
ROM1-201ENST00000278833 IGLV1-50A0A075B6I6 118 aa16.19■□□□□ 0.18
ROM1-201ENST00000278833 Q6ZRX8 168 aa16.19■□□□□ 0.18
ROM1-201ENST00000278833 IGLV5-48A0A075B6I7 105 aa16.18■□□□□ 0.18
ROM1-201ENST00000278833 CYSTM1Q9H1C7 97 aa16.18■□□□□ 0.18
ROM1-201ENST00000278833 A0A1B0GW54 56 aa16.17■□□□□ 0.18
ROM1-201ENST00000278833 TRAV7A0A075B6U4 112 aa16.16■□□□□ 0.18
ROM1-201ENST00000278833 CASC10Q5T4H9 136 aa16.16■□□□□ 0.18
ROM1-201ENST00000278833 Q8N377 158 aa16.16■□□□□ 0.18
ROM1-201ENST00000278833 LOC107984640A0A0U1RRK4 108 aa16.14■□□□□ 0.17
ROM1-201ENST00000278833 RPS28P62857 69 aaKnown RBP16.13■□□□□ 0.17
ROM1-201ENST00000278833 KRTAP7-1Q8IUC3 87 aa16.12■□□□□ 0.17
ROM1-201ENST00000278833 Q9BRP9 147 aa16.1■□□□□ 0.17
ROM1-201ENST00000278833 TNP2Q05952 138 aa16.09■□□□□ 0.17
ROM1-201ENST00000278833 ETDCA0A1B0GVM5 59 aa16.08■□□□□ 0.17
ROM1-201ENST00000278833 J3KT08 172 aa16.08■□□□□ 0.17
ROM1-201ENST00000278833 FAM168BA1KXE4 195 aa16.08■□□□□ 0.16
ROM1-201ENST00000278833 MRPL55Q7Z7F7 128 aaKnown RBP16.07■□□□□ 0.16
ROM1-201ENST00000278833 RPL37AP8A6NKH3 93 aa16.03■□□□□ 0.16
ROM1-201ENST00000278833 CNBPP62633 177 aaKnown RBP16.01■□□□□ 0.15
ROM1-201ENST00000278833 NREPQ16612 68 aa16.01■□□□□ 0.15
ROM1-201ENST00000278833 KLKP1Q107X0 134 aa16■□□□□ 0.15
ROM1-201ENST00000278833 DEFB105AQ8NG35 78 aa15.99■□□□□ 0.15
ROM1-201ENST00000278833 IGKV4-1P06312 121 aa15.98■□□□□ 0.15
ROM1-201ENST00000278833 FUSP35637 526 aaKnown RBP eCLIP15.98■□□□□ 0.15
ROM1-201ENST00000278833 SCXQ7RTU7 201 aa15.98■□□□□ 0.15
ROM1-201ENST00000278833 C20orf197Q8N268 126 aa15.98■□□□□ 0.15
ROM1-201ENST00000278833 DNAH7Q8WXX0 4024 aa15.97■□□□□ 0.15
ROM1-201ENST00000278833 FAM19A5Q7Z5A7 132 aaPredicted RBP15.97■□□□□ 0.15
ROM1-201ENST00000278833 DPH3Q96FX2 82 aa15.97■□□□□ 0.15
ROM1-201ENST00000278833 REG3GQ6UW15 175 aa15.96■□□□□ 0.15
ROM1-201ENST00000278833 Q8NBF4 154 aa15.95■□□□□ 0.14
ROM1-201ENST00000278833 WWC2-AS2Q96NR7 200 aa15.95■□□□□ 0.14
ROM1-201ENST00000278833 SPRR4Q96PI1 79 aa15.95■□□□□ 0.14
ROM1-201ENST00000278833 A0A1W2PNM2 257 aa15.94■□□□□ 0.14
ROM1-201ENST00000278833 C16orf90A8MZG2 172 aa15.94■□□□□ 0.14
ROM1-201ENST00000278833 ERC2-IT1O76042 136 aa15.93■□□□□ 0.14
ROM1-201ENST00000278833 C1orf137Q5JT78 98 aa15.93■□□□□ 0.14
ROM1-201ENST00000278833 BPY2O14599 106 aa15.92■□□□□ 0.14
ROM1-201ENST00000278833 ST20-AS1Q8NBB2 130 aa15.91■□□□□ 0.14
ROM1-201ENST00000278833 KRTAP1-5Q9BYS1 174 aa15.91■□□□□ 0.14
ROM1-201ENST00000278833 CSMD3Q7Z407 3707 aa15.9■□□□□ 0.14
ROM1-201ENST00000278833 C3orf84H3BNL1 204 aa15.9■□□□□ 0.14
ROM1-201ENST00000278833 H7BZZ5 65 aa15.88■□□□□ 0.13
ROM1-201ENST00000278833 UBE2BP63146 152 aa15.88■□□□□ 0.13
ROM1-201ENST00000278833 C14orf177Q52M58 125 aa15.88■□□□□ 0.13
ROM1-201ENST00000278833 APLNQ9ULZ1 77 aa15.87■□□□□ 0.13
ROM1-201ENST00000278833 A0A096LNI7 61 aa15.86■□□□□ 0.13
ROM1-201ENST00000278833 SMIM29Q86T20 159 aa15.86■□□□□ 0.13
ROM1-201ENST00000278833 NDUFC1O43677 76 aa15.85■□□□□ 0.13
ROM1-201ENST00000278833 FAM236DA0A1B0GTK5 79 aa15.83■□□□□ 0.12
ROM1-201ENST00000278833 FAM236CP0DP71 79 aa15.83■□□□□ 0.12
ROM1-201ENST00000278833 DYNC2H1Q8NCM8 4307 aaKnown RBP15.82■□□□□ 0.12
ROM1-201ENST00000278833 IGLV8-61A0A075B6I0 122 aa15.82■□□□□ 0.12
ROM1-201ENST00000278833 OCR1Q9BZK8 76 aa15.81■□□□□ 0.12
ROM1-201ENST00000278833 PKIGQ9Y2B9 76 aa15.81■□□□□ 0.12
ROM1-201ENST00000278833 Q8N9L7 120 aa15.8■□□□□ 0.12
ROM1-201ENST00000278833 STARD9Q9P2P6 4700 aa15.79■□□□□ 0.12
ROM1-201ENST00000278833 PSCAO43653 123 aa15.78■□□□□ 0.12
ROM1-201ENST00000278833 UBE2DNLQ8IWF7 75 aa15.78■□□□□ 0.12
ROM1-201ENST00000278833 A0A1W2PNN7 141 aa15.78■□□□□ 0.12
ROM1-201ENST00000278833 EPM2AB3EWF7 344 aa15.77■□□□□ 0.11
ROM1-201ENST00000278833 F8WEM9 126 aa15.76■□□□□ 0.11
ROM1-201ENST00000278833 H0Y9J4 135 aa15.76■□□□□ 0.11
ROM1-201ENST00000278833 LINC00476Q8WZB0 136 aa15.76■□□□□ 0.11
ROM1-201ENST00000278833 OXTP01178 125 aa15.75■□□□□ 0.11
ROM1-201ENST00000278833 TENM2Q9NT68 2774 aa15.75■□□□□ 0.11
ROM1-201ENST00000278833 ATP5EP56381 51 aaPredicted RBP15.73■□□□□ 0.11
ROM1-201ENST00000278833 TMEM254Q8TBM7 123 aa15.73■□□□□ 0.11
ROM1-201ENST00000278833 SNURFQ9Y675 71 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms