RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 KLK9Q2XQG4 91 aa5.43□□□□□ -1.54
LIMD1-201ENST00000273317 APLNQ9ULZ1 77 aa5.43□□□□□ -1.54
LIMD1-201ENST00000273317 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
LIMD1-201ENST00000273317 CHD6Q8TD26 2715 aa5.43□□□□□ -1.54
LIMD1-201ENST00000273317 COA5Q86WW8 74 aa5.42□□□□□ -1.54
LIMD1-201ENST00000273317 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
LIMD1-201ENST00000273317 LITAFQ99732 161 aa5.42□□□□□ -1.54
LIMD1-201ENST00000273317 RTL8CO15255 209 aa5.41□□□□□ -1.54
LIMD1-201ENST00000273317 CHTF8P0CG12 524 aa5.41□□□□□ -1.54
LIMD1-201ENST00000273317 FLNAP21333 2647 aaKnown RBP5.41□□□□□ -1.54
LIMD1-201ENST00000273317 LAMA3Q16787 3333 aa5.41□□□□□ -1.54
LIMD1-201ENST00000273317 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.54
LIMD1-201ENST00000273317 UQCR11O14957 56 aa5.4□□□□□ -1.54
LIMD1-201ENST00000273317 ST20-AS1Q8NBB2 130 aa5.4□□□□□ -1.54
LIMD1-201ENST00000273317 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.55
LIMD1-201ENST00000273317 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.55
LIMD1-201ENST00000273317 KLKP1Q107X0 134 aa5.39□□□□□ -1.55
LIMD1-201ENST00000273317 A0A0D9SG42 100 aa5.39□□□□□ -1.55
LIMD1-201ENST00000273317 Q8NAQ8 132 aa5.39□□□□□ -1.55
LIMD1-201ENST00000273317 LINC01600Q96MT4 127 aa5.38□□□□□ -1.55
LIMD1-201ENST00000273317 H3BS24 57 aa5.38□□□□□ -1.55
LIMD1-201ENST00000273317 KMT2BQ9UMN6 2715 aaPredicted RBP5.38□□□□□ -1.55
LIMD1-201ENST00000273317 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
LIMD1-201ENST00000273317 MRPL34Q9BQ48 92 aaKnown RBP5.37□□□□□ -1.55
LIMD1-201ENST00000273317 A8MUN3 132 aa5.37□□□□□ -1.55
LIMD1-201ENST00000273317 Q96NJ1 140 aa5.37□□□□□ -1.55
LIMD1-201ENST00000273317 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
LIMD1-201ENST00000273317 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
LIMD1-201ENST00000273317 K7EQZ3 153 aa5.36□□□□□ -1.55
LIMD1-201ENST00000273317 ITPR3Q14573 2671 aa5.35□□□□□ -1.55
LIMD1-201ENST00000273317 LINC00588Q9Y4M8 146 aa5.35□□□□□ -1.55
LIMD1-201ENST00000273317 CD164Q04900 197 aa5.35□□□□□ -1.55
LIMD1-201ENST00000273317 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
LIMD1-201ENST00000273317 LINC00528Q8N1L1 170 aa5.34□□□□□ -1.55
LIMD1-201ENST00000273317 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
LIMD1-201ENST00000273317 IGLV1-50A0A075B6I6 118 aa5.34□□□□□ -1.56
LIMD1-201ENST00000273317 A0A1B0GVX0 72 aa5.34□□□□□ -1.56
LIMD1-201ENST00000273317 PLA2G2DQ9UNK4 145 aa5.34□□□□□ -1.56
LIMD1-201ENST00000273317 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.56
LIMD1-201ENST00000273317 C8orf17Q9NRJ1 99 aa5.33□□□□□ -1.56
LIMD1-201ENST00000273317 LAMA2P24043 3122 aaKnown RBP5.33□□□□□ -1.56
LIMD1-201ENST00000273317 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
LIMD1-201ENST00000273317 IGFL1Q6UW32 110 aa5.32□□□□□ -1.56
LIMD1-201ENST00000273317 FAM168BA1KXE4 195 aa5.31□□□□□ -1.56
LIMD1-201ENST00000273317 LINC01554Q52M75 96 aa5.31□□□□□ -1.56
LIMD1-201ENST00000273317 TLX1NBP0CAT3 122 aa5.3□□□□□ -1.56
LIMD1-201ENST00000273317 LINC00304Q8N9R0 145 aa5.3□□□□□ -1.56
LIMD1-201ENST00000273317 ZNF292O60281 2723 aa5.3□□□□□ -1.56
LIMD1-201ENST00000273317 A0A0C4DFX4 3053 aa5.29□□□□□ -1.56
LIMD1-201ENST00000273317 A0A0G2JQZ4 141 aa5.29□□□□□ -1.56
LIMD1-201ENST00000273317 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
LIMD1-201ENST00000273317 H7BZZ5 65 aa5.29□□□□□ -1.56
LIMD1-201ENST00000273317 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
LIMD1-201ENST00000273317 PRR34Q9NV39 138 aa5.29□□□□□ -1.56
LIMD1-201ENST00000273317 LCA10Q71F78 164 aa5.28□□□□□ -1.56
LIMD1-201ENST00000273317 SETXQ7Z333 2677 aaKnown RBP5.27□□□□□ -1.57
LIMD1-201ENST00000273317 C15orf56Q8N910 161 aa5.27□□□□□ -1.57
LIMD1-201ENST00000273317 LINC00336Q6ZUF6 198 aa5.27□□□□□ -1.57
LIMD1-201ENST00000273317 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
LIMD1-201ENST00000273317 ZNF861PO60384 105 aa5.26□□□□□ -1.57
LIMD1-201ENST00000273317 TEX15Q9BXT5 2789 aa5.26□□□□□ -1.57
LIMD1-201ENST00000273317 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
LIMD1-201ENST00000273317 DSCR10P59022 87 aa5.25□□□□□ -1.57
LIMD1-201ENST00000273317 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
LIMD1-201ENST00000273317 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
LIMD1-201ENST00000273317 ITPR2Q14571 2701 aa5.24□□□□□ -1.57
LIMD1-201ENST00000273317 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
LIMD1-201ENST00000273317 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
LIMD1-201ENST00000273317 Q8N377 158 aa5.23□□□□□ -1.57
LIMD1-201ENST00000273317 Q1T7F1 81 aa5.23□□□□□ -1.57
LIMD1-201ENST00000273317 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
LIMD1-201ENST00000273317 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
LIMD1-201ENST00000273317 MKI67P46013 3256 aaKnown RBP5.22□□□□□ -1.57
LIMD1-201ENST00000273317 FAM104AQ969W3 186 aa5.22□□□□□ -1.57
LIMD1-201ENST00000273317 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
LIMD1-201ENST00000273317 KRTAP24-1Q3LI83 254 aa5.22□□□□□ -1.57
LIMD1-201ENST00000273317 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
LIMD1-201ENST00000273317 XIRP2A4UGR9 3374 aa5.2□□□□□ -1.58
LIMD1-201ENST00000273317 ZNF575Q86XF7 245 aa5.2□□□□□ -1.58
LIMD1-201ENST00000273317 J3QL48 77 aa5.2□□□□□ -1.58
LIMD1-201ENST00000273317 SPRR4Q96PI1 79 aa5.2□□□□□ -1.58
LIMD1-201ENST00000273317 CDH23Q9H251 3354 aa5.19□□□□□ -1.58
LIMD1-201ENST00000273317 C19orf73Q9NVV2 129 aa5.19□□□□□ -1.58
LIMD1-201ENST00000273317 RBM12B-AS1Q9P1G2 102 aa5.19□□□□□ -1.58
LIMD1-201ENST00000273317 Q8N1X5 172 aa5.19□□□□□ -1.58
LIMD1-201ENST00000273317 C5orf42Q9H799 3197 aa5.18□□□□□ -1.58
LIMD1-201ENST00000273317 DNAH14Q0VDD8 3507 aa5.18□□□□□ -1.58
LIMD1-201ENST00000273317 USP34Q70CQ2 3546 aa5.18□□□□□ -1.58
LIMD1-201ENST00000273317 IGLV7-43P04211 117 aa5.17□□□□□ -1.58
LIMD1-201ENST00000273317 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
LIMD1-201ENST00000273317 APCP25054 2843 aa5.17□□□□□ -1.58
LIMD1-201ENST00000273317 A0A087WTM6 91 aa5.16□□□□□ -1.58
LIMD1-201ENST00000273317 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
LIMD1-201ENST00000273317 UBR5O95071 2799 aaPredicted RBP5.16□□□□□ -1.58
LIMD1-201ENST00000273317 IGLV5-48A0A075B6I7 105 aa5.16□□□□□ -1.58
LIMD1-201ENST00000273317 Q75L30 129 aa5.16□□□□□ -1.58
LIMD1-201ENST00000273317 GIG44P09565 113 aaPredicted RBP5.16□□□□□ -1.58
LIMD1-201ENST00000273317 EIF4EBP3O60516 100 aaPredicted RBP5.16□□□□□ -1.58
LIMD1-201ENST00000273317 KRTAP10-11P60412 298 aa5.16□□□□□ -1.58
LIMD1-201ENST00000273317 OCR1Q9BZK8 76 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms