RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 PLA2G2DQ9UNK4 145 aa9.95□□□□□ -0.82
SF3B4-201ENST00000271628 DIRC1Q969H9 104 aa9.95□□□□□ -0.82
SF3B4-201ENST00000271628 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
SF3B4-201ENST00000271628 NBDYA0A0U1RRE5 68 aa9.94□□□□□ -0.82
SF3B4-201ENST00000271628 TENM2Q9NT68 2774 aa9.93□□□□□ -0.82
SF3B4-201ENST00000271628 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
SF3B4-201ENST00000271628 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
SF3B4-201ENST00000271628 ZNF73O43830 326 aaPredicted RBP9.93□□□□□ -0.82
SF3B4-201ENST00000271628 RBM3P98179 157 aaKnown RBP9.93□□□□□ -0.82
SF3B4-201ENST00000271628 NKAPP1Q8N9T2 125 aa9.93□□□□□ -0.82
SF3B4-201ENST00000271628 LOC110117498A0A087WWA1 95 aa9.91□□□□□ -0.82
SF3B4-201ENST00000271628 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
SF3B4-201ENST00000271628 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
SF3B4-201ENST00000271628 DNAH10Q8IVF4 4471 aa9.91□□□□□ -0.82
SF3B4-201ENST00000271628 CRYGAP11844 174 aa9.91□□□□□ -0.82
SF3B4-201ENST00000271628 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.82
SF3B4-201ENST00000271628 GHRHP01286 108 aa9.9□□□□□ -0.82
SF3B4-201ENST00000271628 Q6ZQT0 140 aa9.89□□□□□ -0.83
SF3B4-201ENST00000271628 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
SF3B4-201ENST00000271628 IGLV5-37A0A075B6J1 123 aa9.89□□□□□ -0.83
SF3B4-201ENST00000271628 PDE6GP18545 87 aa9.89□□□□□ -0.83
SF3B4-201ENST00000271628 COX7BP24311 80 aa9.89□□□□□ -0.83
SF3B4-201ENST00000271628 A0A087WVE0 104 aa9.88□□□□□ -0.83
SF3B4-201ENST00000271628 ELOF1P60002 83 aaKnown RBP9.88□□□□□ -0.83
SF3B4-201ENST00000271628 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
SF3B4-201ENST00000271628 Q6ZQY7 126 aa9.87□□□□□ -0.83
SF3B4-201ENST00000271628 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
SF3B4-201ENST00000271628 DSCR8Q96T75 97 aa9.87□□□□□ -0.83
SF3B4-201ENST00000271628 KCNQ1DNQ9H478 68 aa9.87□□□□□ -0.83
SF3B4-201ENST00000271628 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.86□□□□□ -0.83
SF3B4-201ENST00000271628 SMIM20Q8N5G0 67 aa9.86□□□□□ -0.83
SF3B4-201ENST00000271628 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
SF3B4-201ENST00000271628 VPS13DQ5THJ4 4388 aa9.85□□□□□ -0.83
SF3B4-201ENST00000271628 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
SF3B4-201ENST00000271628 LRCOL1A6NCL2 159 aa9.83□□□□□ -0.84
SF3B4-201ENST00000271628 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
SF3B4-201ENST00000271628 FAM168BA1KXE4 195 aa9.83□□□□□ -0.84
SF3B4-201ENST00000271628 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
SF3B4-201ENST00000271628 IGLV1-50A0A075B6I6 118 aa9.82□□□□□ -0.84
SF3B4-201ENST00000271628 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
SF3B4-201ENST00000271628 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
SF3B4-201ENST00000271628 MRPL55Q7Z7F7 128 aaKnown RBP9.81□□□□□ -0.84
SF3B4-201ENST00000271628 PRYO14603 147 aa9.81□□□□□ -0.84
SF3B4-201ENST00000271628 SVIPQ8NHG7 77 aa9.8□□□□□ -0.84
SF3B4-201ENST00000271628 A0A096LNI7 61 aa9.79□□□□□ -0.84
SF3B4-201ENST00000271628 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
SF3B4-201ENST00000271628 KRTAP7-1Q8IUC3 87 aa9.79□□□□□ -0.84
SF3B4-201ENST00000271628 M0R2N4 97 aa9.79□□□□□ -0.84
SF3B4-201ENST00000271628 FAM19A1Q7Z5A9 133 aa9.79□□□□□ -0.84
SF3B4-201ENST00000271628 C9orf163Q8N9P6 203 aa9.79□□□□□ -0.84
SF3B4-201ENST00000271628 TRBV7-4A0A0J9YYF1 115 aa9.78□□□□□ -0.84
SF3B4-201ENST00000271628 RPL37AP8A6NKH3 93 aa9.78□□□□□ -0.84
SF3B4-201ENST00000271628 BCE1O60756 84 aa9.77□□□□□ -0.85
SF3B4-201ENST00000271628 SPRR1AP35321 89 aa9.77□□□□□ -0.85
SF3B4-201ENST00000271628 Q6ZVQ6 151 aa9.77□□□□□ -0.85
SF3B4-201ENST00000271628 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
SF3B4-201ENST00000271628 LINC01547P58512 204 aaPredicted RBP9.76□□□□□ -0.85
SF3B4-201ENST00000271628 CXCL6P80162 114 aa9.76□□□□□ -0.85
SF3B4-201ENST00000271628 FBN3Q75N90 2809 aa9.76□□□□□ -0.85
SF3B4-201ENST00000271628 Q6ZR54 194 aa9.75□□□□□ -0.85
SF3B4-201ENST00000271628 ETDCA0A1B0GVM5 59 aa9.75□□□□□ -0.85
SF3B4-201ENST00000271628 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
SF3B4-201ENST00000271628 TMEM258P61165 79 aa9.75□□□□□ -0.85
SF3B4-201ENST00000271628 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
SF3B4-201ENST00000271628 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
SF3B4-201ENST00000271628 HAMPP81172 84 aa9.74□□□□□ -0.85
SF3B4-201ENST00000271628 Q6ZRX8 168 aa9.74□□□□□ -0.85
SF3B4-201ENST00000271628 WWC2-AS2Q96NR7 200 aa9.74□□□□□ -0.85
SF3B4-201ENST00000271628 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
SF3B4-201ENST00000271628 RPS28P62857 69 aaKnown RBP9.72□□□□□ -0.85
SF3B4-201ENST00000271628 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
SF3B4-201ENST00000271628 A0A087WTM6 91 aa9.71□□□□□ -0.85
SF3B4-201ENST00000271628 REG3GQ6UW15 175 aa9.71□□□□□ -0.85
SF3B4-201ENST00000271628 J3KT08 172 aa9.7□□□□□ -0.86
SF3B4-201ENST00000271628 KMT2AQ03164 3969 aa9.69□□□□□ -0.86
SF3B4-201ENST00000271628 LY6G6CO95867 125 aa9.69□□□□□ -0.86
SF3B4-201ENST00000271628 C1orf134Q5TEV5 83 aa9.68□□□□□ -0.86
SF3B4-201ENST00000271628 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
SF3B4-201ENST00000271628 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
SF3B4-201ENST00000271628 Q9BRP9 147 aa9.67□□□□□ -0.86
SF3B4-201ENST00000271628 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
SF3B4-201ENST00000271628 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.87
SF3B4-201ENST00000271628 TGP01266 2768 aa9.65□□□□□ -0.87
SF3B4-201ENST00000271628 UBE2BP63146 152 aa9.64□□□□□ -0.87
SF3B4-201ENST00000271628 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
SF3B4-201ENST00000271628 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
SF3B4-201ENST00000271628 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
SF3B4-201ENST00000271628 HECTD4Q9Y4D8 3996 aa9.63□□□□□ -0.87
SF3B4-201ENST00000271628 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
SF3B4-201ENST00000271628 Q8N377 158 aa9.62□□□□□ -0.87
SF3B4-201ENST00000271628 DEFB105AQ8NG35 78 aa9.62□□□□□ -0.87
SF3B4-201ENST00000271628 RTL8CO15255 209 aa9.62□□□□□ -0.87
SF3B4-201ENST00000271628 IGLV5-48A0A075B6I7 105 aa9.61□□□□□ -0.87
SF3B4-201ENST00000271628 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
SF3B4-201ENST00000271628 SPACA4Q8TDM5 124 aa9.6□□□□□ -0.87
SF3B4-201ENST00000271628 A0A1B0GW54 56 aa9.6□□□□□ -0.87
SF3B4-201ENST00000271628 EPM2AB3EWF7 344 aa9.59□□□□□ -0.87
SF3B4-201ENST00000271628 H0Y9J4 135 aa9.59□□□□□ -0.87
SF3B4-201ENST00000271628 NREPQ16612 68 aa9.59□□□□□ -0.87
SF3B4-201ENST00000271628 KLKP1Q107X0 134 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms