RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 A0A087WSZ3 146 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 LCE6AA0A183 80 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 UNC79Q9P2D8 2635 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 LINC01546A6NGU7 62 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 C22orf24Q9Y442 160 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 TEP1Q99973 2627 aaKnown RBP5.37□□□□□ -1.55
USP3-201ENST00000268049 DNAH10OSP0CZ25 163 aa5.37□□□□□ -1.55
USP3-201ENST00000268049 SMCR5Q8TEV8 140 aa5.37□□□□□ -1.55
USP3-201ENST00000268049 H3BPC8 53 aa5.36□□□□□ -1.55
USP3-201ENST00000268049 A0A087WTM6 91 aa5.36□□□□□ -1.55
USP3-201ENST00000268049 C9orf163Q8N9P6 203 aa5.36□□□□□ -1.55
USP3-201ENST00000268049 RBM12B-AS1Q9P1G2 102 aa5.36□□□□□ -1.55
USP3-201ENST00000268049 SMR3BP02814 79 aaPredicted RBP5.36□□□□□ -1.55
USP3-201ENST00000268049 ERC2-IT1O76042 136 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 Q6ZRU5 148 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 FAM218AQ96MZ4 157 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 ACYP2P14621 99 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 MGAM2Q2M2H8 2515 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 VCANP13611 3396 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 MAST4O15021 2626 aa5.35□□□□□ -1.55
USP3-201ENST00000268049 A8MTW9 85 aa5.34□□□□□ -1.55
USP3-201ENST00000268049 KRTAP10-3P60369 221 aa5.34□□□□□ -1.55
USP3-201ENST00000268049 MOBPQ13875 183 aa5.34□□□□□ -1.55
USP3-201ENST00000268049 KLKP1Q107X0 134 aa5.34□□□□□ -1.56
USP3-201ENST00000268049 M0R2T5 61 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 Q6ZQT0 140 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 APLNQ9ULZ1 77 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 PRR15Q8IV56 129 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 H3BS24 57 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 TP53AIP1Q9HCN2 124 aa5.33□□□□□ -1.56
USP3-201ENST00000268049 IGLV4-60A0A075B6I1 120 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 KIAA0087Q14695 138 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 TRAV22A0A0B4J277 110 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 KLK9Q2XQG4 91 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 PRLHP81277 87 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 ZNF575Q86XF7 245 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
USP3-201ENST00000268049 A0A1B0GW54 56 aa5.31□□□□□ -1.56
USP3-201ENST00000268049 H7BZZ5 65 aa5.31□□□□□ -1.56
USP3-201ENST00000268049 GCN1Q92616 2671 aaKnown RBP5.31□□□□□ -1.56
USP3-201ENST00000268049 SETXQ7Z333 2677 aaKnown RBP5.3□□□□□ -1.56
USP3-201ENST00000268049 SPTBN5Q9NRC6 3674 aaKnown RBP5.3□□□□□ -1.56
USP3-201ENST00000268049 VPS13AQ96RL7 3174 aa5.3□□□□□ -1.56
USP3-201ENST00000268049 SSBP3-AS1Q7Z2R9 100 aa5.3□□□□□ -1.56
USP3-201ENST00000268049 C11orf72Q8NBR9 251 aa5.29□□□□□ -1.56
USP3-201ENST00000268049 COA5Q86WW8 74 aa5.29□□□□□ -1.56
USP3-201ENST00000268049 PHF5AQ7RTV0 110 aaKnown RBP5.29□□□□□ -1.56
USP3-201ENST00000268049 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
USP3-201ENST00000268049 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
USP3-201ENST00000268049 OXTP01178 125 aa5.28□□□□□ -1.56
USP3-201ENST00000268049 LAMA1P25391 3075 aa5.28□□□□□ -1.56
USP3-201ENST00000268049 EYSQ5T1H1 3165 aa5.28□□□□□ -1.56
USP3-201ENST00000268049 UQCR11O14957 56 aa5.27□□□□□ -1.57
USP3-201ENST00000268049 FRYLO94915 3013 aa5.27□□□□□ -1.57
USP3-201ENST00000268049 CR1P17927 2039 aa5.27□□□□□ -1.57
USP3-201ENST00000268049 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
USP3-201ENST00000268049 LINC00167Q96N53 147 aa5.26□□□□□ -1.57
USP3-201ENST00000268049 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
USP3-201ENST00000268049 LINC00313P59037 77 aa5.26□□□□□ -1.57
USP3-201ENST00000268049 FLNCQ14315 2725 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 DMXL2Q8TDJ6 3036 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 REV3LO60673 3130 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 CHTF8P0CG12 524 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 Q6ZSA8 131 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 LINC01600Q96MT4 127 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 Q96NJ1 140 aa5.25□□□□□ -1.57
USP3-201ENST00000268049 FRYQ5TBA9 3013 aa5.24□□□□□ -1.57
USP3-201ENST00000268049 IGLV5-45A0A087WSX0 123 aa5.24□□□□□ -1.57
USP3-201ENST00000268049 ZNF861PO60384 105 aa5.23□□□□□ -1.57
USP3-201ENST00000268049 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
USP3-201ENST00000268049 COL6A5A8TX70 2615 aa5.23□□□□□ -1.57
USP3-201ENST00000268049 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
USP3-201ENST00000268049 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
USP3-201ENST00000268049 PLA2G2DQ9UNK4 145 aa5.22□□□□□ -1.57
USP3-201ENST00000268049 STAB1Q9NY15 2570 aa5.22□□□□□ -1.57
USP3-201ENST00000268049 DMXL1Q9Y485 3027 aa5.22□□□□□ -1.57
USP3-201ENST00000268049 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.57
USP3-201ENST00000268049 IGHV3OR16-9A0A0B4J2B5 98 aa5.21□□□□□ -1.57
USP3-201ENST00000268049 LITAFQ99732 161 aa5.21□□□□□ -1.57
USP3-201ENST00000268049 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
USP3-201ENST00000268049 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
USP3-201ENST00000268049 Q5VSD8 79 aa5.2□□□□□ -1.58
USP3-201ENST00000268049 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
USP3-201ENST00000268049 TNP2Q05952 138 aa5.19□□□□□ -1.58
USP3-201ENST00000268049 TEX15Q9BXT5 2789 aa5.19□□□□□ -1.58
USP3-201ENST00000268049 Q5XG85 94 aa5.19□□□□□ -1.58
USP3-201ENST00000268049 Q1T7F1 81 aa5.18□□□□□ -1.58
USP3-201ENST00000268049 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
USP3-201ENST00000268049 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
USP3-201ENST00000268049 K7EQZ3 153 aa5.18□□□□□ -1.58
USP3-201ENST00000268049 MAP1AP78559 2803 aaPredicted RBP5.18□□□□□ -1.58
USP3-201ENST00000268049 CSNK1G2-AS1Q8NCQ2 148 aa5.17□□□□□ -1.58
USP3-201ENST00000268049 ATMQ13315 3056 aa5.16□□□□□ -1.58
USP3-201ENST00000268049 MUC4Q99102 2169 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms