RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 Q8NAQ8 132 aa7.79□□□□□ -1.16
VPS33A-201ENST00000267199 ST20-AS1Q8NBB2 130 aa7.79□□□□□ -1.16
VPS33A-201ENST00000267199 C1orf64Q8NEQ6 169 aa7.79□□□□□ -1.16
VPS33A-201ENST00000267199 NBEAL2Q6ZNJ1 2754 aa7.79□□□□□ -1.16
VPS33A-201ENST00000267199 C4orf48Q5BLP8 95 aa7.78□□□□□ -1.16
VPS33A-201ENST00000267199 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
VPS33A-201ENST00000267199 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
VPS33A-201ENST00000267199 TEP1Q99973 2627 aaKnown RBP7.78□□□□□ -1.16
VPS33A-201ENST00000267199 hDV103S1A0JD37 113 aa7.77□□□□□ -1.17
VPS33A-201ENST00000267199 IGLV6-57P01721 117 aa7.77□□□□□ -1.17
VPS33A-201ENST00000267199 ITPR1Q14643 2758 aa7.77□□□□□ -1.17
VPS33A-201ENST00000267199 Q8NBF4 154 aa7.76□□□□□ -1.17
VPS33A-201ENST00000267199 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
VPS33A-201ENST00000267199 LINC01556Q5JQF7 62 aa7.76□□□□□ -1.17
VPS33A-201ENST00000267199 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
VPS33A-201ENST00000267199 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
VPS33A-201ENST00000267199 F8WDY8 70 aa7.75□□□□□ -1.17
VPS33A-201ENST00000267199 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
VPS33A-201ENST00000267199 VPREB1P12018 145 aa7.74□□□□□ -1.17
VPS33A-201ENST00000267199 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
VPS33A-201ENST00000267199 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
VPS33A-201ENST00000267199 A8MUN3 132 aa7.74□□□□□ -1.17
VPS33A-201ENST00000267199 LINC00476Q8WZB0 136 aa7.73□□□□□ -1.17
VPS33A-201ENST00000267199 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
VPS33A-201ENST00000267199 K7EQZ3 153 aa7.73□□□□□ -1.17
VPS33A-201ENST00000267199 Q6ZRP5 223 aa7.73□□□□□ -1.17
VPS33A-201ENST00000267199 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
VPS33A-201ENST00000267199 UBR5O95071 2799 aaPredicted RBP7.72□□□□□ -1.17
VPS33A-201ENST00000267199 Q6ZRX8 168 aa7.72□□□□□ -1.17
VPS33A-201ENST00000267199 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
VPS33A-201ENST00000267199 TRBV7-4A0A0J9YYF1 115 aa7.71□□□□□ -1.17
VPS33A-201ENST00000267199 NOTCH1P46531 2555 aa7.71□□□□□ -1.17
VPS33A-201ENST00000267199 SETXQ7Z333 2677 aaKnown RBP7.71□□□□□ -1.18
VPS33A-201ENST00000267199 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
VPS33A-201ENST00000267199 H3BNG1 76 aa7.7□□□□□ -1.18
VPS33A-201ENST00000267199 TNRC18O15417 2968 aaPredicted RBP7.69□□□□□ -1.18
VPS33A-201ENST00000267199 GVQW2A0A096LPI5 108 aaPredicted RBP7.69□□□□□ -1.18
VPS33A-201ENST00000267199 LINC00612Q8N6U2 182 aa7.69□□□□□ -1.18
VPS33A-201ENST00000267199 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
VPS33A-201ENST00000267199 A0A0G2JQZ4 141 aa7.69□□□□□ -1.18
VPS33A-201ENST00000267199 A0A1W2PNN7 141 aa7.69□□□□□ -1.18
VPS33A-201ENST00000267199 CIRBP-AS1Q8TBR5 109 aa7.69□□□□□ -1.18
VPS33A-201ENST00000267199 KRTAP10-3P60369 221 aa7.68□□□□□ -1.18
VPS33A-201ENST00000267199 FAM168BA1KXE4 195 aa7.68□□□□□ -1.18
VPS33A-201ENST00000267199 ZNF706Q9Y5V0 76 aaPredicted RBP7.68□□□□□ -1.18
VPS33A-201ENST00000267199 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
VPS33A-201ENST00000267199 OBSCN-AS1Q96MR7 158 aa7.66□□□□□ -1.18
VPS33A-201ENST00000267199 PRR34Q9NV39 138 aa7.66□□□□□ -1.18
VPS33A-201ENST00000267199 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
VPS33A-201ENST00000267199 SPINK1P00995 79 aa7.65□□□□□ -1.18
VPS33A-201ENST00000267199 CR1P17927 2039 aa7.65□□□□□ -1.18
VPS33A-201ENST00000267199 KRTAP24-1Q3LI83 254 aa7.64□□□□□ -1.19
VPS33A-201ENST00000267199 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
VPS33A-201ENST00000267199 Q8N377 158 aa7.63□□□□□ -1.19
VPS33A-201ENST00000267199 ZANQ9Y493 2812 aa7.63□□□□□ -1.19
VPS33A-201ENST00000267199 A0A1B0GW54 56 aa7.63□□□□□ -1.19
VPS33A-201ENST00000267199 KRTAP1-1Q07627 177 aa7.63□□□□□ -1.19
VPS33A-201ENST00000267199 ASH1LQ9NR48 2969 aaKnown RBP7.63□□□□□ -1.19
VPS33A-201ENST00000267199 LINC00588Q9Y4M8 146 aa7.62□□□□□ -1.19
VPS33A-201ENST00000267199 COL6A5A8TX70 2615 aa7.62□□□□□ -1.19
VPS33A-201ENST00000267199 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
VPS33A-201ENST00000267199 PHF5AQ7RTV0 110 aaKnown RBP7.61□□□□□ -1.19
VPS33A-201ENST00000267199 Q5XG85 94 aa7.6□□□□□ -1.19
VPS33A-201ENST00000267199 K7ERS5 55 aa7.59□□□□□ -1.19
VPS33A-201ENST00000267199 C15orf56Q8N910 161 aa7.59□□□□□ -1.19
VPS33A-201ENST00000267199 NUPR2A6NF83 97 aa7.59□□□□□ -1.19
VPS33A-201ENST00000267199 LY6G6CO95867 125 aa7.59□□□□□ -1.19
VPS33A-201ENST00000267199 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.19
VPS33A-201ENST00000267199 CHTF8P0CG12 524 aa7.59□□□□□ -1.2
VPS33A-201ENST00000267199 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
VPS33A-201ENST00000267199 EPM2AB3EWF7 344 aa7.58□□□□□ -1.2
VPS33A-201ENST00000267199 WDFY3Q8IZQ1 3526 aa7.58□□□□□ -1.2
VPS33A-201ENST00000267199 NBEAL1Q6ZS30 2694 aa7.57□□□□□ -1.2
VPS33A-201ENST00000267199 OXTP01178 125 aa7.57□□□□□ -1.2
VPS33A-201ENST00000267199 MOBPQ13875 183 aa7.57□□□□□ -1.2
VPS33A-201ENST00000267199 A0A1W2PNM2 257 aa7.57□□□□□ -1.2
VPS33A-201ENST00000267199 WIPF1O43516 503 aa7.56□□□□□ -1.2
VPS33A-201ENST00000267199 UTP20O75691 2785 aaKnown RBP7.56□□□□□ -1.2
VPS33A-201ENST00000267199 COA5Q86WW8 74 aa7.56□□□□□ -1.2
VPS33A-201ENST00000267199 IGFL1Q6UW32 110 aa7.56□□□□□ -1.2
VPS33A-201ENST00000267199 IGLV1-50A0A075B6I6 118 aa7.56□□□□□ -1.2
VPS33A-201ENST00000267199 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
VPS33A-201ENST00000267199 IGKV2D-30A0A075B6S6 120 aa7.55□□□□□ -1.2
VPS33A-201ENST00000267199 IGKV2-30P06310 120 aa7.55□□□□□ -1.2
VPS33A-201ENST00000267199 H3BPC8 53 aa7.55□□□□□ -1.2
VPS33A-201ENST00000267199 A0A1B0GU69 56 aa7.54□□□□□ -1.2
VPS33A-201ENST00000267199 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
VPS33A-201ENST00000267199 Q8NDZ9 215 aa7.54□□□□□ -1.2
VPS33A-201ENST00000267199 ITPR2Q14571 2701 aa7.54□□□□□ -1.2
VPS33A-201ENST00000267199 FP248Q71RG6 208 aaPredicted RBP7.53□□□□□ -1.2
VPS33A-201ENST00000267199 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
VPS33A-201ENST00000267199 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
VPS33A-201ENST00000267199 HRNRQ86YZ3 2850 aaPredicted RBP7.52□□□□□ -1.21
VPS33A-201ENST00000267199 A8MWP4 228 aa7.52□□□□□ -1.21
VPS33A-201ENST00000267199 IGLV5-52A0A0A0MRZ9 124 aa7.52□□□□□ -1.21
VPS33A-201ENST00000267199 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
VPS33A-201ENST00000267199 FAM229BQ4G0N7 80 aa7.51□□□□□ -1.21
VPS33A-201ENST00000267199 MDFIQ99750 246 aa7.51□□□□□ -1.21
VPS33A-201ENST00000267199 ACYP2P14621 99 aa7.49□□□□□ -1.21
VPS33A-201ENST00000267199 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms