RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
VPS41-201ENST00000265745 HSPB8Q9UJY1 196 aa5.55□□□□□ -1.52
VPS41-201ENST00000265745 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 DPM2O94777 84 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 FABP4P15090 132 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 LINC00483Q53H64 154 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 Q8NBF4 154 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
VPS41-201ENST00000265745 COLCA2A8K830 154 aa5.53□□□□□ -1.52
VPS41-201ENST00000265745 ERC2-IT1O76042 136 aa5.53□□□□□ -1.52
VPS41-201ENST00000265745 DDTP30046 118 aa5.53□□□□□ -1.52
VPS41-201ENST00000265745 NMUP48645 174 aa5.53□□□□□ -1.52
VPS41-201ENST00000265745 S100A12P80511 92 aa5.53□□□□□ -1.52
VPS41-201ENST00000265745 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
VPS41-201ENST00000265745 IGKCP01834 107 aa5.52□□□□□ -1.53
VPS41-201ENST00000265745 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
VPS41-201ENST00000265745 HERVK_113P61574 105 aa5.52□□□□□ -1.53
VPS41-201ENST00000265745 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
VPS41-201ENST00000265745 FP248Q71RG6 208 aaPredicted RBP5.52□□□□□ -1.53
VPS41-201ENST00000265745 NDUFC2O95298 119 aa5.51□□□□□ -1.53
VPS41-201ENST00000265745 SPINK1P00995 79 aa5.51□□□□□ -1.53
VPS41-201ENST00000265745 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
VPS41-201ENST00000265745 SLC7A5P1Q8MH63 180 aa5.51□□□□□ -1.53
VPS41-201ENST00000265745 Q9BRP9 147 aa5.51□□□□□ -1.53
VPS41-201ENST00000265745 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
VPS41-201ENST00000265745 SPANXB1Q9NS25 103 aaPredicted RBP5.51□□□□□ -1.53
VPS41-201ENST00000265745 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
VPS41-201ENST00000265745 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
VPS41-201ENST00000265745 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
VPS41-201ENST00000265745 Q6ZRX8 168 aa5.5□□□□□ -1.53
VPS41-201ENST00000265745 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
VPS41-201ENST00000265745 A0A0J9YXY3 114 aa5.49□□□□□ -1.53
VPS41-201ENST00000265745 E9PLD3 99 aa5.49□□□□□ -1.53
VPS41-201ENST00000265745 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
VPS41-201ENST00000265745 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
VPS41-201ENST00000265745 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
VPS41-201ENST00000265745 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
VPS41-201ENST00000265745 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
VPS41-201ENST00000265745 MOBPQ13875 183 aa5.48□□□□□ -1.53
VPS41-201ENST00000265745 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
VPS41-201ENST00000265745 TRAV23DV6A0A075B6W5 121 aa5.47□□□□□ -1.53
VPS41-201ENST00000265745 ZNF73O43830 326 aaPredicted RBP5.47□□□□□ -1.53
VPS41-201ENST00000265745 SYS1-DBNDD2H3BUS1 97 aa5.46□□□□□ -1.54
VPS41-201ENST00000265745 NPC2P61916 151 aa5.46□□□□□ -1.54
VPS41-201ENST00000265745 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
VPS41-201ENST00000265745 JOSD1Q15040 202 aaPredicted RBP5.46□□□□□ -1.54
VPS41-201ENST00000265745 LITAFQ99732 161 aa5.46□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BKO60814 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BJP06899 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BOP23527 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BBP33778 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BDP58876 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BCP62807 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST2H2BEQ16778 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.45□□□□□ -1.54
VPS41-201ENST00000265745 Q8N377 158 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BHQ93079 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BNQ99877 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 HIST1H2BMQ99879 126 aa5.45□□□□□ -1.54
VPS41-201ENST00000265745 SLC25A20O43772 301 aa5.44□□□□□ -1.54
VPS41-201ENST00000265745 ASB16-AS1Q495Z4 193 aa5.44□□□□□ -1.54
VPS41-201ENST00000265745 LINC01545Q5VT33 79 aa5.44□□□□□ -1.54
VPS41-201ENST00000265745 ST20-AS1Q8NBB2 130 aa5.44□□□□□ -1.54
VPS41-201ENST00000265745 LINC00308Q8TCZ7 52 aa5.44□□□□□ -1.54
VPS41-201ENST00000265745 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
VPS41-201ENST00000265745 TIMM17BO60830 172 aa5.43□□□□□ -1.54
VPS41-201ENST00000265745 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
VPS41-201ENST00000265745 CBY1Q9Y3M2 126 aa5.43□□□□□ -1.54
VPS41-201ENST00000265745 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
VPS41-201ENST00000265745 KRTAP9-2Q9BYQ4 174 aa5.42□□□□□ -1.54
VPS41-201ENST00000265745 C9orf153Q5TBE3 101 aa5.41□□□□□ -1.54
VPS41-201ENST00000265745 TTTY13Q9BZ97 58 aa5.41□□□□□ -1.54
VPS41-201ENST00000265745 ZNF815PA8K554 130 aa5.4□□□□□ -1.54
VPS41-201ENST00000265745 SPRR1BP22528 89 aa5.4□□□□□ -1.54
VPS41-201ENST00000265745 SPANXDQ9BXN6 97 aa5.4□□□□□ -1.54
VPS41-201ENST00000265745 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.54
VPS41-201ENST00000265745 DHRS4-AS1Q9P1J3 65 aa5.4□□□□□ -1.54
VPS41-201ENST00000265745 C3orf79P0CE67 100 aa5.39□□□□□ -1.55
VPS41-201ENST00000265745 LINC00518Q8N0U6 118 aa5.39□□□□□ -1.55
VPS41-201ENST00000265745 COA6Q5JTJ3 125 aaKnown RBP5.38□□□□□ -1.55
VPS41-201ENST00000265745 SLC25A34Q6PIV7 304 aa5.38□□□□□ -1.55
VPS41-201ENST00000265745 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
VPS41-201ENST00000265745 KRTDAPP60985 99 aa5.37□□□□□ -1.55
VPS41-201ENST00000265745 C6orf99Q4VX62 202 aa5.37□□□□□ -1.55
VPS41-201ENST00000265745 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
VPS41-201ENST00000265745 COX7BP24311 80 aa5.36□□□□□ -1.55
VPS41-201ENST00000265745 LAMTOR3Q9UHA4 124 aa5.36□□□□□ -1.55
VPS41-201ENST00000265745 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
VPS41-201ENST00000265745 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
VPS41-201ENST00000265745 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
VPS41-201ENST00000265745 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
VPS41-201ENST00000265745 IFITM1P13164 125 aa5.34□□□□□ -1.55
VPS41-201ENST00000265745 TAL2Q16559 108 aa5.34□□□□□ -1.55
VPS41-201ENST00000265745 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.55
VPS41-201ENST00000265745 TEX49A0A1B0GTD5 131 aa5.33□□□□□ -1.56
VPS41-201ENST00000265745 C20orf202A1L168 122 aa5.33□□□□□ -1.56
VPS41-201ENST00000265745 LINC01547P58512 204 aaPredicted RBP5.33□□□□□ -1.56
VPS41-201ENST00000265745 Q1RN00 199 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms