RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 Q6ZRU5 148 aa11.69□□□□□ -0.54
SRF-201ENST00000265354 Q5XG85 94 aa11.69□□□□□ -0.54
SRF-201ENST00000265354 Q6ZQT0 140 aa11.69□□□□□ -0.54
SRF-201ENST00000265354 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
SRF-201ENST00000265354 GIG44P09565 113 aaPredicted RBP11.68□□□□□ -0.54
SRF-201ENST00000265354 IGHV4-30-4P0DP06 118 aa11.68□□□□□ -0.54
SRF-201ENST00000265354 NDUFB1O75438 58 aa11.67□□□□□ -0.54
SRF-201ENST00000265354 BAHCC1Q9P281 2608 aa11.66□□□□□ -0.54
SRF-201ENST00000265354 SERTAD4-AS1Q5TG53 156 aa11.66□□□□□ -0.54
SRF-201ENST00000265354 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
SRF-201ENST00000265354 C6orf48Q9UBA6 75 aa11.66□□□□□ -0.54
SRF-201ENST00000265354 Q6ZTC4 211 aa11.65□□□□□ -0.54
SRF-201ENST00000265354 CD164Q04900 197 aa11.64□□□□□ -0.55
SRF-201ENST00000265354 OXTP01178 125 aa11.64□□□□□ -0.55
SRF-201ENST00000265354 C1orf137Q5JT78 98 aa11.64□□□□□ -0.55
SRF-201ENST00000265354 APCP25054 2843 aa11.63□□□□□ -0.55
SRF-201ENST00000265354 X6R8D5 127 aa11.62□□□□□ -0.55
SRF-201ENST00000265354 SMIM29Q86T20 159 aa11.62□□□□□ -0.55
SRF-201ENST00000265354 MXRA5Q9NR99 2828 aa11.61□□□□□ -0.55
SRF-201ENST00000265354 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
SRF-201ENST00000265354 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
SRF-201ENST00000265354 EGFEM1PQ0D2K5 195 aa11.61□□□□□ -0.55
SRF-201ENST00000265354 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
SRF-201ENST00000265354 PCOTHQ58A44 107 aa11.6□□□□□ -0.55
SRF-201ENST00000265354 HCG22E2RYF7 251 aa11.59□□□□□ -0.55
SRF-201ENST00000265354 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
SRF-201ENST00000265354 ITPR2Q14571 2701 aa11.57□□□□□ -0.56
SRF-201ENST00000265354 CSNK1G2-AS1Q8NCQ2 148 aa11.57□□□□□ -0.56
SRF-201ENST00000265354 MDFIQ99750 246 aa11.56□□□□□ -0.56
SRF-201ENST00000265354 CXCL6P80162 114 aa11.56□□□□□ -0.56
SRF-201ENST00000265354 KLKP1Q107X0 134 aa11.56□□□□□ -0.56
SRF-201ENST00000265354 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
SRF-201ENST00000265354 C22orf24Q9Y442 160 aa11.55□□□□□ -0.56
SRF-201ENST00000265354 A0A096LNT2 108 aa11.53□□□□□ -0.56
SRF-201ENST00000265354 FSHBP01225 129 aa11.53□□□□□ -0.56
SRF-201ENST00000265354 B9D2Q9BPU9 175 aa11.53□□□□□ -0.56
SRF-201ENST00000265354 A0A087WSZ3 146 aa11.52□□□□□ -0.56
SRF-201ENST00000265354 CASC2Q6XLA1 102 aa11.51□□□□□ -0.57
SRF-201ENST00000265354 DHRS4-AS1Q9P1J3 65 aa11.51□□□□□ -0.57
SRF-201ENST00000265354 C19orf73Q9NVV2 129 aa11.5□□□□□ -0.57
SRF-201ENST00000265354 FP248Q71RG6 208 aaPredicted RBP11.5□□□□□ -0.57
SRF-201ENST00000265354 ST20-AS1Q8NBB2 130 aa11.5□□□□□ -0.57
SRF-201ENST00000265354 A0A0G2JQZ4 141 aa11.5□□□□□ -0.57
SRF-201ENST00000265354 A0A1W2PNN7 141 aa11.5□□□□□ -0.57
SRF-201ENST00000265354 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
SRF-201ENST00000265354 C7orf33Q8WU49 177 aa11.49□□□□□ -0.57
SRF-201ENST00000265354 PRLHP81277 87 aa11.49□□□□□ -0.57
SRF-201ENST00000265354 SPAG11AQ6PDA7 123 aa11.49□□□□□ -0.57
SRF-201ENST00000265354 LOC110117498A0A087WWA1 95 aa11.49□□□□□ -0.57
SRF-201ENST00000265354 ELOF1P60002 83 aaKnown RBP11.47□□□□□ -0.57
SRF-201ENST00000265354 C1orf64Q8NEQ6 169 aa11.47□□□□□ -0.57
SRF-201ENST00000265354 LIMD2Q9BT23 127 aa11.47□□□□□ -0.57
SRF-201ENST00000265354 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
SRF-201ENST00000265354 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
SRF-201ENST00000265354 BCE1O60756 84 aa11.47□□□□□ -0.57
SRF-201ENST00000265354 TRAV22A0A0B4J277 110 aa11.46□□□□□ -0.57
SRF-201ENST00000265354 Q8NDZ9 215 aa11.46□□□□□ -0.57
SRF-201ENST00000265354 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.57
SRF-201ENST00000265354 Q6ZRP5 223 aa11.45□□□□□ -0.58
SRF-201ENST00000265354 H0Y9P7 68 aa11.44□□□□□ -0.58
SRF-201ENST00000265354 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
SRF-201ENST00000265354 OBSCN-AS1Q96MR7 158 aa11.43□□□□□ -0.58
SRF-201ENST00000265354 VPREB1P12018 145 aa11.42□□□□□ -0.58
SRF-201ENST00000265354 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
SRF-201ENST00000265354 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
SRF-201ENST00000265354 IGLV9-49A0A0B4J1Y8 123 aa11.4□□□□□ -0.58
SRF-201ENST00000265354 KTN1-AS1Q86SY8 53 aa11.4□□□□□ -0.58
SRF-201ENST00000265354 LINC00167Q96N53 147 aa11.4□□□□□ -0.58
SRF-201ENST00000265354 FAM229BQ4G0N7 80 aa11.4□□□□□ -0.58
SRF-201ENST00000265354 Q8NAQ8 132 aa11.38□□□□□ -0.59
SRF-201ENST00000265354 RBM12B-AS1Q9P1G2 102 aa11.38□□□□□ -0.59
SRF-201ENST00000265354 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
SRF-201ENST00000265354 H3BS24 57 aa11.36□□□□□ -0.59
SRF-201ENST00000265354 REG3GQ6UW15 175 aa11.36□□□□□ -0.59
SRF-201ENST00000265354 K7EQZ3 153 aa11.34□□□□□ -0.59
SRF-201ENST00000265354 TRBV7-4A0A0J9YYF1 115 aa11.33□□□□□ -0.59
SRF-201ENST00000265354 LINC00528Q8N1L1 170 aa11.33□□□□□ -0.6
SRF-201ENST00000265354 Q9BRP9 147 aa11.33□□□□□ -0.6
SRF-201ENST00000265354 hDV103S1A0JD37 113 aa11.32□□□□□ -0.6
SRF-201ENST00000265354 KRTAP10-3P60369 221 aa11.3□□□□□ -0.6
SRF-201ENST00000265354 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
SRF-201ENST00000265354 Q8N377 158 aa11.3□□□□□ -0.6
SRF-201ENST00000265354 Q8NBF4 154 aa11.29□□□□□ -0.6
SRF-201ENST00000265354 Q6ZRX8 168 aa11.28□□□□□ -0.6
SRF-201ENST00000265354 LINC00476Q8WZB0 136 aa11.28□□□□□ -0.6
SRF-201ENST00000265354 PRR34Q9NV39 138 aa11.27□□□□□ -0.61
SRF-201ENST00000265354 GVQW2A0A096LPI5 108 aaPredicted RBP11.24□□□□□ -0.61
SRF-201ENST00000265354 C15orf56Q8N910 161 aa11.24□□□□□ -0.61
SRF-201ENST00000265354 IGHV6-1A0A0B4J1U7 121 aa11.23□□□□□ -0.61
SRF-201ENST00000265354 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
SRF-201ENST00000265354 C7orf65Q6ZTY9 151 aa11.23□□□□□ -0.61
SRF-201ENST00000265354 CSMD2Q7Z408 3487 aa11.23□□□□□ -0.61
SRF-201ENST00000265354 LINC00612Q8N6U2 182 aa11.22□□□□□ -0.61
SRF-201ENST00000265354 RETNLBQ9BQ08 111 aa11.22□□□□□ -0.61
SRF-201ENST00000265354 ERC2-IT1O76042 136 aa11.22□□□□□ -0.61
SRF-201ENST00000265354 LINC01556Q5JQF7 62 aa11.21□□□□□ -0.61
SRF-201ENST00000265354 LCA10Q71F78 164 aa11.21□□□□□ -0.62
SRF-201ENST00000265354 CHTF8P0CG12 524 aa11.2□□□□□ -0.62
SRF-201ENST00000265354 A0A1W2PNM2 257 aa11.2□□□□□ -0.62
SRF-201ENST00000265354 KRTAP1-3Q8IUG1 177 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms