RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 X6R8D5 127 aa8.77□□□□□ -1.01
NUP54-201ENST00000264883 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
NUP54-201ENST00000264883 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
NUP54-201ENST00000264883 IGHV4-30-4P0DP06 118 aa8.77□□□□□ -1.01
NUP54-201ENST00000264883 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
NUP54-201ENST00000264883 CELA1Q9UNI1 258 aa8.76□□□□□ -1.01
NUP54-201ENST00000264883 VWFP04275 2813 aa8.75□□□□□ -1.01
NUP54-201ENST00000264883 ATRQ13535 2644 aa8.75□□□□□ -1.01
NUP54-201ENST00000264883 TEP1Q99973 2627 aaKnown RBP8.75□□□□□ -1.01
NUP54-201ENST00000264883 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
NUP54-201ENST00000264883 ELOF1P60002 83 aaKnown RBP8.75□□□□□ -1.01
NUP54-201ENST00000264883 CD164Q04900 197 aa8.75□□□□□ -1.01
NUP54-201ENST00000264883 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
NUP54-201ENST00000264883 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
NUP54-201ENST00000264883 MAST4O15021 2626 aa8.74□□□□□ -1.01
NUP54-201ENST00000264883 A0A096LPF7 62 aa8.74□□□□□ -1.01
NUP54-201ENST00000264883 TRAV22A0A0B4J277 110 aa8.74□□□□□ -1.01
NUP54-201ENST00000264883 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
NUP54-201ENST00000264883 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
NUP54-201ENST00000264883 LCE6AA0A183 80 aa8.73□□□□□ -1.01
NUP54-201ENST00000264883 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
NUP54-201ENST00000264883 LELP1Q5T871 98 aa8.7□□□□□ -1.02
NUP54-201ENST00000264883 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
NUP54-201ENST00000264883 RETNQ9HD89 108 aa8.69□□□□□ -1.02
NUP54-201ENST00000264883 ZCCHC13Q8WW36 166 aaKnown RBP8.69□□□□□ -1.02
NUP54-201ENST00000264883 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
NUP54-201ENST00000264883 APOC4P55056 127 aa8.68□□□□□ -1.02
NUP54-201ENST00000264883 A8MUN3 132 aa8.66□□□□□ -1.02
NUP54-201ENST00000264883 PSCAO43653 123 aa8.66□□□□□ -1.02
NUP54-201ENST00000264883 KRTAP24-1Q3LI83 254 aa8.66□□□□□ -1.02
NUP54-201ENST00000264883 CYP4F30PQ9H0H9 118 aa8.66□□□□□ -1.02
NUP54-201ENST00000264883 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
NUP54-201ENST00000264883 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
NUP54-201ENST00000264883 PRR4Q16378 134 aa8.65□□□□□ -1.02
NUP54-201ENST00000264883 FBN1P35555 2871 aaKnown RBP8.64□□□□□ -1.03
NUP54-201ENST00000264883 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
NUP54-201ENST00000264883 C6orf48Q9UBA6 75 aa8.64□□□□□ -1.03
NUP54-201ENST00000264883 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
NUP54-201ENST00000264883 A8MU10 97 aa8.63□□□□□ -1.03
NUP54-201ENST00000264883 UBE2BP63146 152 aa8.63□□□□□ -1.03
NUP54-201ENST00000264883 MRPL55Q7Z7F7 128 aaKnown RBP8.63□□□□□ -1.03
NUP54-201ENST00000264883 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
NUP54-201ENST00000264883 SPART-AS1P0CW21 52 aa8.62□□□□□ -1.03
NUP54-201ENST00000264883 VPREB1P12018 145 aa8.62□□□□□ -1.03
NUP54-201ENST00000264883 M0R378 163 aa8.61□□□□□ -1.03
NUP54-201ENST00000264883 PRB2P02812 416 aaPredicted RBP8.61□□□□□ -1.03
NUP54-201ENST00000264883 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
NUP54-201ENST00000264883 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
NUP54-201ENST00000264883 Q5VV11 94 aa8.61□□□□□ -1.03
NUP54-201ENST00000264883 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
NUP54-201ENST00000264883 STAB1Q9NY15 2570 aa8.6□□□□□ -1.03
NUP54-201ENST00000264883 EGFEM1PQ0D2K5 195 aa8.6□□□□□ -1.03
NUP54-201ENST00000264883 Q8NAQ8 132 aa8.6□□□□□ -1.03
NUP54-201ENST00000264883 ST20-AS1Q8NBB2 130 aa8.59□□□□□ -1.03
NUP54-201ENST00000264883 KTN1-AS1Q86SY8 53 aa8.59□□□□□ -1.03
NUP54-201ENST00000264883 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
NUP54-201ENST00000264883 A0A1B0GW54 56 aa8.58□□□□□ -1.04
NUP54-201ENST00000264883 NDUFB1O75438 58 aa8.58□□□□□ -1.04
NUP54-201ENST00000264883 UBE2AP49459 152 aa8.58□□□□□ -1.04
NUP54-201ENST00000264883 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
NUP54-201ENST00000264883 Q8N377 158 aa8.57□□□□□ -1.04
NUP54-201ENST00000264883 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
NUP54-201ENST00000264883 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
NUP54-201ENST00000264883 DEFB4AO15263 64 aa8.56□□□□□ -1.04
NUP54-201ENST00000264883 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
NUP54-201ENST00000264883 DSCR10P59022 87 aa8.56□□□□□ -1.04
NUP54-201ENST00000264883 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
NUP54-201ENST00000264883 K7EQZ3 153 aa8.55□□□□□ -1.04
NUP54-201ENST00000264883 COL6A5A8TX70 2615 aa8.55□□□□□ -1.04
NUP54-201ENST00000264883 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
NUP54-201ENST00000264883 H3BNG1 76 aa8.55□□□□□ -1.04
NUP54-201ENST00000264883 B9D2Q9BPU9 175 aa8.54□□□□□ -1.04
NUP54-201ENST00000264883 HTN3P15516 51 aa8.54□□□□□ -1.04
NUP54-201ENST00000264883 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
NUP54-201ENST00000264883 SPTSSBQ8NFR3 76 aa8.53□□□□□ -1.04
NUP54-201ENST00000264883 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
NUP54-201ENST00000264883 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
NUP54-201ENST00000264883 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
NUP54-201ENST00000264883 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
NUP54-201ENST00000264883 Q8NBF4 154 aa8.51□□□□□ -1.05
NUP54-201ENST00000264883 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
NUP54-201ENST00000264883 MP68P56378 58 aa8.5□□□□□ -1.05
NUP54-201ENST00000264883 KRTAP26-1Q6PEX3 210 aa8.5□□□□□ -1.05
NUP54-201ENST00000264883 CMYA5Q8N3K9 4069 aa8.49□□□□□ -1.05
NUP54-201ENST00000264883 NBEAL2Q6ZNJ1 2754 aa8.49□□□□□ -1.05
NUP54-201ENST00000264883 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
NUP54-201ENST00000264883 LINC00208Q96KT6 92 aa8.48□□□□□ -1.05
NUP54-201ENST00000264883 NDUFS5O43920 106 aa8.48□□□□□ -1.05
NUP54-201ENST00000264883 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
NUP54-201ENST00000264883 MDFIQ99750 246 aa8.48□□□□□ -1.05
NUP54-201ENST00000264883 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
NUP54-201ENST00000264883 C15orf56Q8N910 161 aa8.47□□□□□ -1.05
NUP54-201ENST00000264883 TNP2Q05952 138 aa8.47□□□□□ -1.05
NUP54-201ENST00000264883 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
NUP54-201ENST00000264883 LCA10Q71F78 164 aa8.46□□□□□ -1.06
NUP54-201ENST00000264883 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
NUP54-201ENST00000264883 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.06
NUP54-201ENST00000264883 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
NUP54-201ENST00000264883 NKAPP1Q8N9T2 125 aa8.45□□□□□ -1.06
NUP54-201ENST00000264883 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms