RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 NOTCH1P46531 2555 aa8.19□□□□□ -1.1
CHMP3-201ENST00000263856 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
CHMP3-201ENST00000263856 ESRGQ1W209 222 aa8.18□□□□□ -1.1
CHMP3-201ENST00000263856 Q5XG85 94 aa8.18□□□□□ -1.1
CHMP3-201ENST00000263856 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
CHMP3-201ENST00000263856 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
CHMP3-201ENST00000263856 SERTAD4-AS1Q5TG53 156 aa8.16□□□□□ -1.1
CHMP3-201ENST00000263856 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
CHMP3-201ENST00000263856 FAM168BA1KXE4 195 aa8.14□□□□□ -1.11
CHMP3-201ENST00000263856 H3BQ85 93 aa8.14□□□□□ -1.11
CHMP3-201ENST00000263856 MAST4O15021 2626 aa8.14□□□□□ -1.11
CHMP3-201ENST00000263856 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
CHMP3-201ENST00000263856 KLKP1Q107X0 134 aa8.13□□□□□ -1.11
CHMP3-201ENST00000263856 C7orf33Q8WU49 177 aa8.13□□□□□ -1.11
CHMP3-201ENST00000263856 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
CHMP3-201ENST00000263856 TMEM254Q8TBM7 123 aa8.13□□□□□ -1.11
CHMP3-201ENST00000263856 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
CHMP3-201ENST00000263856 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
CHMP3-201ENST00000263856 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
CHMP3-201ENST00000263856 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
CHMP3-201ENST00000263856 MPLKIPQ8TAP9 179 aa8.11□□□□□ -1.11
CHMP3-201ENST00000263856 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
CHMP3-201ENST00000263856 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
CHMP3-201ENST00000263856 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 PRB2P02812 416 aaPredicted RBP8.1□□□□□ -1.11
CHMP3-201ENST00000263856 Q8N377 158 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 A0A0G2JQZ4 141 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 TRBV7-6A0A0J9YX20 115 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 A0A1W2PNN7 141 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 FUSP35637 526 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHMP3-201ENST00000263856 UBE2BP63146 152 aa8.1□□□□□ -1.11
CHMP3-201ENST00000263856 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
CHMP3-201ENST00000263856 C11orf45Q8TAV5 145 aa8.09□□□□□ -1.11
CHMP3-201ENST00000263856 KRTAP10-11P60412 298 aa8.08□□□□□ -1.12
CHMP3-201ENST00000263856 SMIM29Q86T20 159 aa8.08□□□□□ -1.12
CHMP3-201ENST00000263856 COL6A5A8TX70 2615 aa8.08□□□□□ -1.12
CHMP3-201ENST00000263856 BCE1O60756 84 aa8.07□□□□□ -1.12
CHMP3-201ENST00000263856 DEFB116Q30KQ4 102 aa8.07□□□□□ -1.12
CHMP3-201ENST00000263856 C1orf137Q5JT78 98 aa8.06□□□□□ -1.12
CHMP3-201ENST00000263856 MRAPQ8TCY5 172 aa8.06□□□□□ -1.12
CHMP3-201ENST00000263856 LRCOL1A6NCL2 159 aa8.06□□□□□ -1.12
CHMP3-201ENST00000263856 PRYO14603 147 aa8.05□□□□□ -1.12
CHMP3-201ENST00000263856 LINC00336Q6ZUF6 198 aa8.05□□□□□ -1.12
CHMP3-201ENST00000263856 ANK2Q01484 3957 aa8.05□□□□□ -1.12
CHMP3-201ENST00000263856 PRR4Q16378 134 aa8.04□□□□□ -1.12
CHMP3-201ENST00000263856 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
CHMP3-201ENST00000263856 Q9BRP9 147 aa8.04□□□□□ -1.12
CHMP3-201ENST00000263856 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
CHMP3-201ENST00000263856 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
CHMP3-201ENST00000263856 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
CHMP3-201ENST00000263856 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
CHMP3-201ENST00000263856 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
CHMP3-201ENST00000263856 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
CHMP3-201ENST00000263856 NDUFC1O43677 76 aa8.03□□□□□ -1.12
CHMP3-201ENST00000263856 FAM229BQ4G0N7 80 aa8.03□□□□□ -1.12
CHMP3-201ENST00000263856 Q6ZRX8 168 aa8.03□□□□□ -1.12
CHMP3-201ENST00000263856 NBEAL1Q6ZS30 2694 aa8.02□□□□□ -1.13
CHMP3-201ENST00000263856 BRK1Q8WUW1 75 aa8.01□□□□□ -1.13
CHMP3-201ENST00000263856 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
CHMP3-201ENST00000263856 DHRS4-AS1Q9P1J3 65 aa8□□□□□ -1.13
CHMP3-201ENST00000263856 H3BNG1 76 aa8□□□□□ -1.13
CHMP3-201ENST00000263856 KMT2BQ9UMN6 2715 aaPredicted RBP7.99□□□□□ -1.13
CHMP3-201ENST00000263856 PKIGQ9Y2B9 76 aa7.99□□□□□ -1.13
CHMP3-201ENST00000263856 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
CHMP3-201ENST00000263856 K7EQZ3 153 aa7.99□□□□□ -1.13
CHMP3-201ENST00000263856 CSMD3Q7Z407 3707 aa7.99□□□□□ -1.13
CHMP3-201ENST00000263856 PRLHP81277 87 aa7.98□□□□□ -1.13
CHMP3-201ENST00000263856 IGLV1-50A0A075B6I6 118 aa7.98□□□□□ -1.13
CHMP3-201ENST00000263856 A0A0U1RQV1 116 aa7.98□□□□□ -1.13
CHMP3-201ENST00000263856 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
CHMP3-201ENST00000263856 WFDC13Q8IUB5 93 aa7.98□□□□□ -1.13
CHMP3-201ENST00000263856 LINC00588Q9Y4M8 146 aa7.98□□□□□ -1.13
CHMP3-201ENST00000263856 IGLV5-48A0A075B6I7 105 aa7.97□□□□□ -1.13
CHMP3-201ENST00000263856 Q8NBF4 154 aa7.96□□□□□ -1.13
CHMP3-201ENST00000263856 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.96□□□□□ -1.14
CHMP3-201ENST00000263856 A0A096LNI7 61 aa7.95□□□□□ -1.14
CHMP3-201ENST00000263856 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
CHMP3-201ENST00000263856 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
CHMP3-201ENST00000263856 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
CHMP3-201ENST00000263856 LINC00476Q8WZB0 136 aa7.94□□□□□ -1.14
CHMP3-201ENST00000263856 DNAH10OSP0CZ25 163 aa7.94□□□□□ -1.14
CHMP3-201ENST00000263856 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
CHMP3-201ENST00000263856 A0A087WSZ3 146 aa7.92□□□□□ -1.14
CHMP3-201ENST00000263856 DSCR10P59022 87 aa7.92□□□□□ -1.14
CHMP3-201ENST00000263856 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
CHMP3-201ENST00000263856 PSCAO43653 123 aa7.92□□□□□ -1.14
CHMP3-201ENST00000263856 PRO0628Q9UI54 55 aa7.91□□□□□ -1.14
CHMP3-201ENST00000263856 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
CHMP3-201ENST00000263856 WIPF1O43516 503 aa7.9□□□□□ -1.14
CHMP3-201ENST00000263856 TNP2Q05952 138 aa7.89□□□□□ -1.15
CHMP3-201ENST00000263856 KRTAP24-1Q3LI83 254 aa7.89□□□□□ -1.15
CHMP3-201ENST00000263856 MGAM2Q2M2H8 2515 aa7.89□□□□□ -1.15
CHMP3-201ENST00000263856 F8WDY8 70 aa7.88□□□□□ -1.15
CHMP3-201ENST00000263856 TLX1NBP0CAT3 122 aa7.88□□□□□ -1.15
CHMP3-201ENST00000263856 HCG22E2RYF7 251 aa7.88□□□□□ -1.15
CHMP3-201ENST00000263856 IGFL1Q6UW32 110 aa7.88□□□□□ -1.15
CHMP3-201ENST00000263856 SPRR1AP35321 89 aa7.87□□□□□ -1.15
CHMP3-201ENST00000263856 CHTF8P0CG12 524 aa7.87□□□□□ -1.15
CHMP3-201ENST00000263856 UBE2AP49459 152 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms