RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TM2D3Q9BRN9 247 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 TMEM258P61165 79 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 CASC10Q5T4H9 136 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 DNAH3Q8TD57 4116 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 DNHD1Q96M86 4753 aa6□□□□□ -1.45
MSH4-201ENST00000263187 NDUFC2-KCTD14E9PQ53 114 aa6□□□□□ -1.45
MSH4-201ENST00000263187 BPY2O14599 106 aa6□□□□□ -1.45
MSH4-201ENST00000263187 DEFB131BA0A096LNP1 70 aa6□□□□□ -1.45
MSH4-201ENST00000263187 M0R378 163 aa6□□□□□ -1.45
MSH4-201ENST00000263187 MRAPQ8TCY5 172 aa6□□□□□ -1.45
MSH4-201ENST00000263187 KRTAP26-1Q6PEX3 210 aa6□□□□□ -1.45
MSH4-201ENST00000263187 NKAPP1Q8N9T2 125 aa6□□□□□ -1.45
MSH4-201ENST00000263187 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
MSH4-201ENST00000263187 GVQW2A0A096LPI5 108 aaPredicted RBP5.99□□□□□ -1.45
MSH4-201ENST00000263187 EGFEM1PQ0D2K5 195 aa5.99□□□□□ -1.45
MSH4-201ENST00000263187 SYCNQ0VAF6 134 aa5.98□□□□□ -1.45
MSH4-201ENST00000263187 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
MSH4-201ENST00000263187 TRBV7-4A0A0J9YYF1 115 aa5.98□□□□□ -1.45
MSH4-201ENST00000263187 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
MSH4-201ENST00000263187 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
MSH4-201ENST00000263187 HRCT1Q6UXD1 115 aa5.97□□□□□ -1.45
MSH4-201ENST00000263187 ST20-AS1Q8NBB2 130 aa5.97□□□□□ -1.45
MSH4-201ENST00000263187 C11orf45Q8TAV5 145 aa5.97□□□□□ -1.45
MSH4-201ENST00000263187 C7orf33Q8WU49 177 aa5.97□□□□□ -1.45
MSH4-201ENST00000263187 DNAH10Q8IVF4 4471 aa5.97□□□□□ -1.45
MSH4-201ENST00000263187 F8WEM9 126 aa5.96□□□□□ -1.45
MSH4-201ENST00000263187 COL7A1Q02388 2944 aa5.96□□□□□ -1.46
MSH4-201ENST00000263187 NREPQ16612 68 aa5.96□□□□□ -1.46
MSH4-201ENST00000263187 KRTAP24-1Q3LI83 254 aa5.96□□□□□ -1.46
MSH4-201ENST00000263187 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
MSH4-201ENST00000263187 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
MSH4-201ENST00000263187 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
MSH4-201ENST00000263187 H7BZZ5 65 aa5.95□□□□□ -1.46
MSH4-201ENST00000263187 PDE6GP18545 87 aa5.94□□□□□ -1.46
MSH4-201ENST00000263187 Q8N377 158 aa5.94□□□□□ -1.46
MSH4-201ENST00000263187 CXCL6P80162 114 aa5.93□□□□□ -1.46
MSH4-201ENST00000263187 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
MSH4-201ENST00000263187 ERC2-IT1O76042 136 aa5.92□□□□□ -1.46
MSH4-201ENST00000263187 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
MSH4-201ENST00000263187 IGKV2-24A0A0C4DH68 120 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 Q9BRP9 147 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 UBE2BP63146 152 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 FAM30AQ9NZY2 134 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 LINC00588Q9Y4M8 146 aa5.91□□□□□ -1.46
MSH4-201ENST00000263187 Q5XG85 94 aa5.9□□□□□ -1.46
MSH4-201ENST00000263187 TRBV7-6A0A0J9YX20 115 aa5.9□□□□□ -1.47
MSH4-201ENST00000263187 IGKV4-1P06312 121 aa5.9□□□□□ -1.47
MSH4-201ENST00000263187 MDFIQ99750 246 aa5.89□□□□□ -1.47
MSH4-201ENST00000263187 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
MSH4-201ENST00000263187 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
MSH4-201ENST00000263187 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
MSH4-201ENST00000263187 TMEM254Q8TBM7 123 aa5.88□□□□□ -1.47
MSH4-201ENST00000263187 HIGD2AQ9BW72 106 aa5.88□□□□□ -1.47
MSH4-201ENST00000263187 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
MSH4-201ENST00000263187 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
MSH4-201ENST00000263187 C5orf47Q569G3 176 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 H3BNG1 76 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 H3BQ85 93 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 KLKP1Q107X0 134 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 Q6ZRX8 168 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 SMIM29Q86T20 159 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.87□□□□□ -1.47
MSH4-201ENST00000263187 PRLHP81277 87 aa5.87□□□□□ -1.47
MSH4-201ENST00000263187 LRCOL1A6NCL2 159 aa5.86□□□□□ -1.47
MSH4-201ENST00000263187 FUSP35637 526 aaKnown RBP eCLIP5.86□□□□□ -1.47
MSH4-201ENST00000263187 WIPF1O43516 503 aa5.86□□□□□ -1.47
MSH4-201ENST00000263187 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
MSH4-201ENST00000263187 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
MSH4-201ENST00000263187 HUWE1Q7Z6Z7 4374 aaKnown RBP5.85□□□□□ -1.47
MSH4-201ENST00000263187 A0A096LNI7 61 aa5.85□□□□□ -1.47
MSH4-201ENST00000263187 DNAH10OSP0CZ25 163 aa5.85□□□□□ -1.47
MSH4-201ENST00000263187 PRR4Q16378 134 aa5.85□□□□□ -1.47
MSH4-201ENST00000263187 MRPL55Q7Z7F7 128 aaKnown RBP5.85□□□□□ -1.47
MSH4-201ENST00000263187 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.48
MSH4-201ENST00000263187 K7EQZ3 153 aa5.83□□□□□ -1.48
MSH4-201ENST00000263187 FAM229BQ4G0N7 80 aa5.83□□□□□ -1.48
MSH4-201ENST00000263187 DNAH9Q9NYC9 4486 aa5.83□□□□□ -1.48
MSH4-201ENST00000263187 DHRS4-AS1Q9P1J3 65 aa5.83□□□□□ -1.48
MSH4-201ENST00000263187 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
MSH4-201ENST00000263187 OCR1Q9BZK8 76 aa5.82□□□□□ -1.48
MSH4-201ENST00000263187 IGLV5-48A0A075B6I7 105 aa5.82□□□□□ -1.48
MSH4-201ENST00000263187 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
MSH4-201ENST00000263187 DNAH7Q8WXX0 4024 aa5.82□□□□□ -1.48
MSH4-201ENST00000263187 DNAH1Q9P2D7 4330 aa5.82□□□□□ -1.48
MSH4-201ENST00000263187 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
MSH4-201ENST00000263187 SEC61GP60059 68 aa5.81□□□□□ -1.48
MSH4-201ENST00000263187 EPM2AB3EWF7 344 aa5.81□□□□□ -1.48
MSH4-201ENST00000263187 PRYO14603 147 aa5.81□□□□□ -1.48
MSH4-201ENST00000263187 PSCAO43653 123 aa5.81□□□□□ -1.48
MSH4-201ENST00000263187 RPL37AP61513 92 aaKnown RBP5.81□□□□□ -1.48
MSH4-201ENST00000263187 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
MSH4-201ENST00000263187 KRTAP1-5Q9BYS1 174 aa5.81□□□□□ -1.48
MSH4-201ENST00000263187 REG3GQ6UW15 175 aa5.8□□□□□ -1.48
MSH4-201ENST00000263187 LINC00476Q8WZB0 136 aa5.8□□□□□ -1.48
MSH4-201ENST00000263187 BCE1O60756 84 aa5.8□□□□□ -1.48
MSH4-201ENST00000263187 LINC00336Q6ZUF6 198 aa5.8□□□□□ -1.48
MSH4-201ENST00000263187 Q8NBF4 154 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms