RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 TMEM258P61165 79 aa10.68□□□□□ -0.7
TM9SF1-201ENST00000261789 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
TM9SF1-201ENST00000261789 CASC10Q5T4H9 136 aa10.67□□□□□ -0.7
TM9SF1-201ENST00000261789 LYSTQ99698 3801 aa10.67□□□□□ -0.7
TM9SF1-201ENST00000261789 DPH3Q96FX2 82 aa10.67□□□□□ -0.7
TM9SF1-201ENST00000261789 NBEAL1Q6ZS30 2694 aa10.66□□□□□ -0.7
TM9SF1-201ENST00000261789 FAM168BA1KXE4 195 aa10.66□□□□□ -0.7
TM9SF1-201ENST00000261789 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
TM9SF1-201ENST00000261789 NKAPP1Q8N9T2 125 aa10.66□□□□□ -0.7
TM9SF1-201ENST00000261789 C7orf33Q8WU49 177 aa10.66□□□□□ -0.7
TM9SF1-201ENST00000261789 DNAH3Q8TD57 4116 aa10.66□□□□□ -0.7
TM9SF1-201ENST00000261789 CXCL6P80162 114 aa10.65□□□□□ -0.7
TM9SF1-201ENST00000261789 Q8N9L7 120 aa10.65□□□□□ -0.7
TM9SF1-201ENST00000261789 RPS28P62857 69 aaKnown RBP10.64□□□□□ -0.71
TM9SF1-201ENST00000261789 OXTP01178 125 aa10.64□□□□□ -0.71
TM9SF1-201ENST00000261789 KCNQ1DNQ9H478 68 aa10.63□□□□□ -0.71
TM9SF1-201ENST00000261789 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
TM9SF1-201ENST00000261789 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
TM9SF1-201ENST00000261789 Q8N377 158 aa10.61□□□□□ -0.71
TM9SF1-201ENST00000261789 LINC00588Q9Y4M8 146 aa10.61□□□□□ -0.71
TM9SF1-201ENST00000261789 COL6A5A8TX70 2615 aa10.61□□□□□ -0.71
TM9SF1-201ENST00000261789 DNAH1Q9P2D7 4330 aa10.61□□□□□ -0.71
TM9SF1-201ENST00000261789 TRAV7A0A075B6U4 112 aa10.61□□□□□ -0.71
TM9SF1-201ENST00000261789 SNURFQ9Y675 71 aa10.61□□□□□ -0.71
TM9SF1-201ENST00000261789 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
TM9SF1-201ENST00000261789 DNAH10Q8IVF4 4471 aa10.59□□□□□ -0.71
TM9SF1-201ENST00000261789 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
TM9SF1-201ENST00000261789 KRTAP7-1Q8IUC3 87 aa10.58□□□□□ -0.72
TM9SF1-201ENST00000261789 Q9BRP9 147 aa10.58□□□□□ -0.72
TM9SF1-201ENST00000261789 ST20-AS1Q8NBB2 130 aa10.57□□□□□ -0.72
TM9SF1-201ENST00000261789 RMI2Q96E14 147 aa10.57□□□□□ -0.72
TM9SF1-201ENST00000261789 CSMD3Q7Z407 3707 aa10.56□□□□□ -0.72
TM9SF1-201ENST00000261789 HUWE1Q7Z6Z7 4374 aaKnown RBP10.56□□□□□ -0.72
TM9SF1-201ENST00000261789 F8WDY8 70 aa10.56□□□□□ -0.72
TM9SF1-201ENST00000261789 BPY2O14599 106 aa10.56□□□□□ -0.72
TM9SF1-201ENST00000261789 NREPQ16612 68 aa10.56□□□□□ -0.72
TM9SF1-201ENST00000261789 H7BZZ5 65 aa10.55□□□□□ -0.72
TM9SF1-201ENST00000261789 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
TM9SF1-201ENST00000261789 Q6ZRX8 168 aa10.55□□□□□ -0.72
TM9SF1-201ENST00000261789 IGLV1-50A0A075B6I6 118 aa10.53□□□□□ -0.72
TM9SF1-201ENST00000261789 BCE1O60756 84 aa10.53□□□□□ -0.72
TM9SF1-201ENST00000261789 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
TM9SF1-201ENST00000261789 KRTAP4-16G5E9R7 235 aaPredicted RBP10.53□□□□□ -0.72
TM9SF1-201ENST00000261789 ERC2-IT1O76042 136 aa10.52□□□□□ -0.73
TM9SF1-201ENST00000261789 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
TM9SF1-201ENST00000261789 ETDCA0A1B0GVM5 59 aa10.51□□□□□ -0.73
TM9SF1-201ENST00000261789 IGLV5-48A0A075B6I7 105 aa10.5□□□□□ -0.73
TM9SF1-201ENST00000261789 KLKP1Q107X0 134 aa10.5□□□□□ -0.73
TM9SF1-201ENST00000261789 FAM236DA0A1B0GTK5 79 aa10.5□□□□□ -0.73
TM9SF1-201ENST00000261789 FAM236CP0DP71 79 aa10.5□□□□□ -0.73
TM9SF1-201ENST00000261789 COL7A1Q02388 2944 aa10.5□□□□□ -0.73
TM9SF1-201ENST00000261789 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
TM9SF1-201ENST00000261789 PLA2G2DQ9UNK4 145 aa10.49□□□□□ -0.73
TM9SF1-201ENST00000261789 C4orf26Q17RF5 130 aa10.49□□□□□ -0.73
TM9SF1-201ENST00000261789 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
TM9SF1-201ENST00000261789 F8WEM9 126 aa10.48□□□□□ -0.73
TM9SF1-201ENST00000261789 DNAH9Q9NYC9 4486 aa10.48□□□□□ -0.73
TM9SF1-201ENST00000261789 SPRR1AP35321 89 aa10.48□□□□□ -0.73
TM9SF1-201ENST00000261789 MRPL55Q7Z7F7 128 aaKnown RBP10.48□□□□□ -0.73
TM9SF1-201ENST00000261789 PRYO14603 147 aa10.47□□□□□ -0.73
TM9SF1-201ENST00000261789 C1orf137Q5JT78 98 aa10.46□□□□□ -0.73
TM9SF1-201ENST00000261789 UBE2BP63146 152 aa10.46□□□□□ -0.74
TM9SF1-201ENST00000261789 MGAM2Q2M2H8 2515 aa10.46□□□□□ -0.74
TM9SF1-201ENST00000261789 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.74
TM9SF1-201ENST00000261789 IGLV5-37A0A075B6J1 123 aa10.45□□□□□ -0.74
TM9SF1-201ENST00000261789 Q5XG85 94 aa10.45□□□□□ -0.74
TM9SF1-201ENST00000261789 TENM2Q9NT68 2774 aa10.45□□□□□ -0.74
TM9SF1-201ENST00000261789 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
TM9SF1-201ENST00000261789 A0A1W2PNN7 141 aa10.45□□□□□ -0.74
TM9SF1-201ENST00000261789 STAB2Q8WWQ8 2551 aa10.44□□□□□ -0.74
TM9SF1-201ENST00000261789 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
TM9SF1-201ENST00000261789 TNP2Q05952 138 aa10.44□□□□□ -0.74
TM9SF1-201ENST00000261789 K7EIL1 84 aa10.43□□□□□ -0.74
TM9SF1-201ENST00000261789 HRCT1Q6UXD1 115 aa10.43□□□□□ -0.74
TM9SF1-201ENST00000261789 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
TM9SF1-201ENST00000261789 TMEM254Q8TBM7 123 aa10.42□□□□□ -0.74
TM9SF1-201ENST00000261789 DNAH7Q8WXX0 4024 aa10.41□□□□□ -0.74
TM9SF1-201ENST00000261789 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
TM9SF1-201ENST00000261789 OCR1Q9BZK8 76 aa10.4□□□□□ -0.74
TM9SF1-201ENST00000261789 REG3GQ6UW15 175 aa10.4□□□□□ -0.75
TM9SF1-201ENST00000261789 Q8NBF4 154 aa10.39□□□□□ -0.75
TM9SF1-201ENST00000261789 A0A096LNI7 61 aa10.38□□□□□ -0.75
TM9SF1-201ENST00000261789 PRLHP81277 87 aa10.38□□□□□ -0.75
TM9SF1-201ENST00000261789 SMIM29Q86T20 159 aa10.38□□□□□ -0.75
TM9SF1-201ENST00000261789 FAM30AQ9NZY2 134 aa10.36□□□□□ -0.75
TM9SF1-201ENST00000261789 SERP1Q9Y6X1 66 aa10.36□□□□□ -0.75
TM9SF1-201ENST00000261789 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
TM9SF1-201ENST00000261789 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
TM9SF1-201ENST00000261789 LINC00476Q8WZB0 136 aa10.34□□□□□ -0.75
TM9SF1-201ENST00000261789 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
TM9SF1-201ENST00000261789 HIGD2AQ9BW72 106 aa10.34□□□□□ -0.75
TM9SF1-201ENST00000261789 DSCR10P59022 87 aa10.33□□□□□ -0.76
TM9SF1-201ENST00000261789 K7EQZ3 153 aa10.33□□□□□ -0.76
TM9SF1-201ENST00000261789 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
TM9SF1-201ENST00000261789 PSCAO43653 123 aa10.32□□□□□ -0.76
TM9SF1-201ENST00000261789 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
TM9SF1-201ENST00000261789 NDUFC1O43677 76 aa10.31□□□□□ -0.76
TM9SF1-201ENST00000261789 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
TM9SF1-201ENST00000261789 IGFL1Q6UW32 110 aa10.3□□□□□ -0.76
TM9SF1-201ENST00000261789 KRTAP11-1Q8IUC1 163 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms