RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SPART-AS1P0CW21 52 aa10.52□□□□□ -0.72
LMNB1-201ENST00000261366 FLNBO75369 2602 aaKnown RBP10.52□□□□□ -0.73
LMNB1-201ENST00000261366 BAHCC1Q9P281 2608 aa10.52□□□□□ -0.73
LMNB1-201ENST00000261366 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
LMNB1-201ENST00000261366 IGKV4-1P06312 121 aa10.51□□□□□ -0.73
LMNB1-201ENST00000261366 BRK1Q8WUW1 75 aa10.51□□□□□ -0.73
LMNB1-201ENST00000261366 A0A0U1RQV1 116 aa10.5□□□□□ -0.73
LMNB1-201ENST00000261366 APOC4P55056 127 aa10.5□□□□□ -0.73
LMNB1-201ENST00000261366 LINC00528Q8N1L1 170 aa10.5□□□□□ -0.73
LMNB1-201ENST00000261366 GVQW2A0A096LPI5 108 aaPredicted RBP10.49□□□□□ -0.73
LMNB1-201ENST00000261366 M0R378 163 aa10.49□□□□□ -0.73
LMNB1-201ENST00000261366 FAM30AQ9NZY2 134 aa10.49□□□□□ -0.73
LMNB1-201ENST00000261366 LRCOL1A6NCL2 159 aa10.49□□□□□ -0.73
LMNB1-201ENST00000261366 PRO0628Q9UI54 55 aa10.49□□□□□ -0.73
LMNB1-201ENST00000261366 Q6ZRP5 223 aa10.48□□□□□ -0.73
LMNB1-201ENST00000261366 H3BQ85 93 aa10.47□□□□□ -0.73
LMNB1-201ENST00000261366 RPL37AP8A6NKH3 93 aa10.46□□□□□ -0.73
LMNB1-201ENST00000261366 PRYO14603 147 aa10.46□□□□□ -0.73
LMNB1-201ENST00000261366 NDUFC1O43677 76 aa10.46□□□□□ -0.73
LMNB1-201ENST00000261366 RETNQ9HD89 108 aa10.46□□□□□ -0.73
LMNB1-201ENST00000261366 MRAPQ8TCY5 172 aa10.46□□□□□ -0.74
LMNB1-201ENST00000261366 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
LMNB1-201ENST00000261366 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
LMNB1-201ENST00000261366 C15orf56Q8N910 161 aa10.44□□□□□ -0.74
LMNB1-201ENST00000261366 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
LMNB1-201ENST00000261366 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
LMNB1-201ENST00000261366 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
LMNB1-201ENST00000261366 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
LMNB1-201ENST00000261366 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
LMNB1-201ENST00000261366 NKAPP1Q8N9T2 125 aa10.43□□□□□ -0.74
LMNB1-201ENST00000261366 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
LMNB1-201ENST00000261366 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
LMNB1-201ENST00000261366 Q8N377 158 aa10.42□□□□□ -0.74
LMNB1-201ENST00000261366 PRR4Q16378 134 aa10.4□□□□□ -0.74
LMNB1-201ENST00000261366 ST20-AS1Q8NBB2 130 aa10.4□□□□□ -0.74
LMNB1-201ENST00000261366 C7orf33Q8WU49 177 aa10.39□□□□□ -0.75
LMNB1-201ENST00000261366 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
LMNB1-201ENST00000261366 A0A1W2PNN7 141 aa10.39□□□□□ -0.75
LMNB1-201ENST00000261366 FAM168BA1KXE4 195 aa10.39□□□□□ -0.75
LMNB1-201ENST00000261366 Q6ZTC4 211 aa10.39□□□□□ -0.75
LMNB1-201ENST00000261366 KRTAP26-1Q6PEX3 210 aa10.38□□□□□ -0.75
LMNB1-201ENST00000261366 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
LMNB1-201ENST00000261366 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
LMNB1-201ENST00000261366 ESRGQ1W209 222 aa10.36□□□□□ -0.75
LMNB1-201ENST00000261366 A0A1W2PNM2 257 aa10.36□□□□□ -0.75
LMNB1-201ENST00000261366 DEFB116Q30KQ4 102 aa10.35□□□□□ -0.75
LMNB1-201ENST00000261366 C1orf137Q5JT78 98 aa10.34□□□□□ -0.75
LMNB1-201ENST00000261366 ERC2-IT1O76042 136 aa10.33□□□□□ -0.76
LMNB1-201ENST00000261366 Q9BRP9 147 aa10.32□□□□□ -0.76
LMNB1-201ENST00000261366 FBN1P35555 2871 aaKnown RBP10.31□□□□□ -0.76
LMNB1-201ENST00000261366 MAST4O15021 2626 aa10.31□□□□□ -0.76
LMNB1-201ENST00000261366 NOTCH1P46531 2555 aa10.31□□□□□ -0.76
LMNB1-201ENST00000261366 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
LMNB1-201ENST00000261366 K7EQZ3 153 aa10.31□□□□□ -0.76
LMNB1-201ENST00000261366 KCNQ1DNQ9H478 68 aa10.31□□□□□ -0.76
LMNB1-201ENST00000261366 STAB1Q9NY15 2570 aa10.31□□□□□ -0.76
LMNB1-201ENST00000261366 OXLD1Q5BKU9 147 aa10.3□□□□□ -0.76
LMNB1-201ENST00000261366 ANK2Q01484 3957 aa10.29□□□□□ -0.76
LMNB1-201ENST00000261366 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
LMNB1-201ENST00000261366 UBE2BP63146 152 aa10.28□□□□□ -0.76
LMNB1-201ENST00000261366 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
LMNB1-201ENST00000261366 Q6ZRX8 168 aa10.28□□□□□ -0.76
LMNB1-201ENST00000261366 SRRM2Q9UQ35 2752 aaKnown RBP10.27□□□□□ -0.77
LMNB1-201ENST00000261366 DSCR10P59022 87 aa10.25□□□□□ -0.77
LMNB1-201ENST00000261366 PSPHP1O15172 72 aa10.25□□□□□ -0.77
LMNB1-201ENST00000261366 C1orf64Q8NEQ6 169 aa10.25□□□□□ -0.77
LMNB1-201ENST00000261366 WFDC13Q8IUB5 93 aa10.24□□□□□ -0.77
LMNB1-201ENST00000261366 Q8NBF4 154 aa10.24□□□□□ -0.77
LMNB1-201ENST00000261366 DHRS4-AS1Q9P1J3 65 aa10.23□□□□□ -0.77
LMNB1-201ENST00000261366 C1orf195Q5TG92 126 aa10.22□□□□□ -0.77
LMNB1-201ENST00000261366 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.77
LMNB1-201ENST00000261366 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.77
LMNB1-201ENST00000261366 COL6A5A8TX70 2615 aa10.21□□□□□ -0.77
LMNB1-201ENST00000261366 hDV103S1A0JD37 113 aa10.21□□□□□ -0.78
LMNB1-201ENST00000261366 KRTAP10-11P60412 298 aa10.21□□□□□ -0.78
LMNB1-201ENST00000261366 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
LMNB1-201ENST00000261366 KRTAP24-1Q3LI83 254 aa10.2□□□□□ -0.78
LMNB1-201ENST00000261366 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
LMNB1-201ENST00000261366 TNP2Q05952 138 aa10.18□□□□□ -0.78
LMNB1-201ENST00000261366 LINC01556Q5JQF7 62 aa10.18□□□□□ -0.78
LMNB1-201ENST00000261366 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
LMNB1-201ENST00000261366 PSCAO43653 123 aa10.18□□□□□ -0.78
LMNB1-201ENST00000261366 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
LMNB1-201ENST00000261366 KRTAP4-16G5E9R7 235 aaPredicted RBP10.17□□□□□ -0.78
LMNB1-201ENST00000261366 LINC00476Q8WZB0 136 aa10.17□□□□□ -0.78
LMNB1-201ENST00000261366 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
LMNB1-201ENST00000261366 PRLHP81277 87 aa10.16□□□□□ -0.78
LMNB1-201ENST00000261366 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
LMNB1-201ENST00000261366 A0A087WSZ3 146 aa10.14□□□□□ -0.79
LMNB1-201ENST00000261366 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
LMNB1-201ENST00000261366 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
LMNB1-201ENST00000261366 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
LMNB1-201ENST00000261366 NBEAL1Q6ZS30 2694 aa10.13□□□□□ -0.79
LMNB1-201ENST00000261366 H3BNG1 76 aa10.12□□□□□ -0.79
LMNB1-201ENST00000261366 CMYA5Q8N3K9 4069 aa10.12□□□□□ -0.79
LMNB1-201ENST00000261366 ZCCHC13Q8WW36 166 aaKnown RBP10.12□□□□□ -0.79
LMNB1-201ENST00000261366 IGFL1Q6UW32 110 aa10.11□□□□□ -0.79
LMNB1-201ENST00000261366 LINC00208Q96KT6 92 aa10.11□□□□□ -0.79
LMNB1-201ENST00000261366 LCE6AA0A183 80 aa10.1□□□□□ -0.79
LMNB1-201ENST00000261366 SPRR1AP35321 89 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms