RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 C9orf129Q5T035 196 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 FAM19A3Q7Z5A8 133 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 IGHV3-38A0A0C4DH36 116 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 A0A0U1RRA0 63 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 TEN1Q86WV5 123 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 PRYO14603 147 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 ENHOQ6UWT2 76 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 NPC2P61916 151 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 CASC2Q6XLA1 102 aa3.69□□□□□ -1.82
TOPBP1-201ENST00000260810 LRCOL1A6NCL2 159 aa3.68□□□□□ -1.82
TOPBP1-201ENST00000260810 KLK12Q9UKR0 248 aa3.68□□□□□ -1.82
TOPBP1-201ENST00000260810 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
TOPBP1-201ENST00000260810 ADAMTSL4-AS1Q5T5F5 129 aa3.68□□□□□ -1.82
TOPBP1-201ENST00000260810 MUSTN1Q8IVN3 82 aa3.68□□□□□ -1.82
TOPBP1-201ENST00000260810 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
TOPBP1-201ENST00000260810 BPY2O14599 106 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 C5orf38Q86SI9 138 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 KRTAP19-2Q3LHN2 52 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 TRAV23DV6A0A075B6W5 121 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 FAM19A1Q7Z5A9 133 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
TOPBP1-201ENST00000260810 IGHV4-28A0A0C4DH34 117 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 ETDBQ3ZM63 59 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 Q6ZR54 194 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 Q6ZTC4 211 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 IGLV5-45A0A087WSX0 123 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 TRBV7-6A0A0J9YX20 115 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 CHTF8P0CG12 524 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 A0A0J9YXV3 536 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
TOPBP1-201ENST00000260810 USP17L23D6RBM5 183 aa3.65□□□□□ -1.82
TOPBP1-201ENST00000260810 M0QXV9 152 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 DAND5Q8N907 189 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 NCR3O14931 201 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 UBE2D3P61077 147 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 ESRGQ1W209 222 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 ZNF625Q96I27 306 aaPredicted RBP3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 PPDPFQ9H3Y8 114 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.83
TOPBP1-201ENST00000260810 H0Y9J4 135 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 BCE1O60756 84 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 C1orf134Q5TEV5 83 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 A0A087WZ39 114 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 LINC00269Q8N2A0 174 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 DEFB105AQ8NG35 78 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 FAM30AQ9NZY2 134 aa3.64□□□□□ -1.83
TOPBP1-201ENST00000260810 IGHV3OR16-9A0A0B4J2B5 98 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 RTL8CO15255 209 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 KMT2DO14686 5537 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 LECT2O14960 151 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 CLPSL2Q6UWE3 100 aa3.63□□□□□ -1.83
TOPBP1-201ENST00000260810 NDUFC2-KCTD14E9PQ53 114 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 Q6ZUT4 128 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 PCP2Q8IVA1 136 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 WWC2-AS2Q96NR7 200 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 IGLV5-52A0A0A0MRZ9 124 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 LINC00242Q5T6M2 205 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 LINC00959A0A1B0GUT2 108 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 LINC00308Q8TCZ7 52 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 H3BPC8 53 aa3.62□□□□□ -1.83
TOPBP1-201ENST00000260810 C3orf84H3BNL1 204 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 KRTAP10-2P60368 255 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 RNASE13Q5GAN3 156 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 UQCRQO14949 82 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 RBX1P62877 108 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 WFDC10BQ8IUB3 73 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 LINC00588Q9Y4M8 146 aa3.61□□□□□ -1.83
TOPBP1-201ENST00000260810 TEX49A0A1B0GTD5 131 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 Q6Q795 121 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 TP53AIP1Q9HCN2 124 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 PLA2G1BP04054 148 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 FOXI1Q12951 378 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 IGLV10-54A0A075B6I4 117 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 IGLV5-39A0A0G2JS06 123 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 ZNF73O43830 326 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 C20orf197Q8N268 126 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 LST1O00453 97 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 C14orf132Q9NPU4 83 aa3.6□□□□□ -1.83
TOPBP1-201ENST00000260810 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
TOPBP1-201ENST00000260810 TRBV10-3A0A0K0K1G6 114 aa3.59□□□□□ -1.83
TOPBP1-201ENST00000260810 SMCPP49901 116 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-201ENST00000260810 RPL37AP61513 92 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-201ENST00000260810 LINC01556Q5JQF7 62 aa3.59□□□□□ -1.83
TOPBP1-201ENST00000260810 Q8N9L7 120 aa3.59□□□□□ -1.83
TOPBP1-201ENST00000260810 A0A0J9YWU9 116 aa3.59□□□□□ -1.84
TOPBP1-201ENST00000260810 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms