RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 NBEAL1Q6ZS30 2694 aa12.21□□□□□ -0.45
LRP3-201ENST00000253193 UBE2BP63146 152 aa12.2□□□□□ -0.46
LRP3-201ENST00000253193 HRCT1Q6UXD1 115 aa12.2□□□□□ -0.46
LRP3-201ENST00000253193 BAHCC1Q9P281 2608 aa12.2□□□□□ -0.46
LRP3-201ENST00000253193 C5orf47Q569G3 176 aa12.19□□□□□ -0.46
LRP3-201ENST00000253193 MGAM2Q2M2H8 2515 aa12.18□□□□□ -0.46
LRP3-201ENST00000253193 TENM3Q9P273 2699 aa12.18□□□□□ -0.46
LRP3-201ENST00000253193 LINC01556Q5JQF7 62 aa12.17□□□□□ -0.46
LRP3-201ENST00000253193 C7orf33Q8WU49 177 aa12.17□□□□□ -0.46
LRP3-201ENST00000253193 BPY2O14599 106 aa12.16□□□□□ -0.46
LRP3-201ENST00000253193 H3BNG1 76 aa12.16□□□□□ -0.46
LRP3-201ENST00000253193 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.46
LRP3-201ENST00000253193 TRAV7A0A075B6U4 112 aa12.15□□□□□ -0.46
LRP3-201ENST00000253193 SERTAD4-AS1Q5TG53 156 aa12.15□□□□□ -0.46
LRP3-201ENST00000253193 LINC00528Q8N1L1 170 aa12.14□□□□□ -0.47
LRP3-201ENST00000253193 RMI2Q96E14 147 aa12.14□□□□□ -0.47
LRP3-201ENST00000253193 IGKV2-24A0A0C4DH68 120 aa12.14□□□□□ -0.47
LRP3-201ENST00000253193 PSCAO43653 123 aa12.13□□□□□ -0.47
LRP3-201ENST00000253193 Q5XG85 94 aa12.13□□□□□ -0.47
LRP3-201ENST00000253193 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
LRP3-201ENST00000253193 FAM168BA1KXE4 195 aa12.13□□□□□ -0.47
LRP3-201ENST00000253193 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
LRP3-201ENST00000253193 CXCL6P80162 114 aa12.12□□□□□ -0.47
LRP3-201ENST00000253193 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
LRP3-201ENST00000253193 TRBV7-4A0A0J9YYF1 115 aa12.11□□□□□ -0.47
LRP3-201ENST00000253193 FBN1P35555 2871 aaKnown RBP12.11□□□□□ -0.47
LRP3-201ENST00000253193 TRBV7-6A0A0J9YX20 115 aa12.1□□□□□ -0.47
LRP3-201ENST00000253193 TM2D3Q9BRN9 247 aa12.09□□□□□ -0.47
LRP3-201ENST00000253193 H7BZZ5 65 aa12.09□□□□□ -0.47
LRP3-201ENST00000253193 F8WEM9 126 aa12.08□□□□□ -0.48
LRP3-201ENST00000253193 CASC10Q5T4H9 136 aa12.08□□□□□ -0.48
LRP3-201ENST00000253193 KRTAP26-1Q6PEX3 210 aa12.08□□□□□ -0.48
LRP3-201ENST00000253193 UBE2DNLQ8IWF7 75 aa12.07□□□□□ -0.48
LRP3-201ENST00000253193 ST20-AS1Q8NBB2 130 aa12.06□□□□□ -0.48
LRP3-201ENST00000253193 LINC00588Q9Y4M8 146 aa12.06□□□□□ -0.48
LRP3-201ENST00000253193 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
LRP3-201ENST00000253193 WIPF1O43516 503 aa12.04□□□□□ -0.48
LRP3-201ENST00000253193 C1orf137Q5JT78 98 aa12.04□□□□□ -0.48
LRP3-201ENST00000253193 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.03□□□□□ -0.48
LRP3-201ENST00000253193 HIGD2AQ9BW72 106 aa12.03□□□□□ -0.48
LRP3-201ENST00000253193 KMT2BQ9UMN6 2715 aaPredicted RBP12.03□□□□□ -0.48
LRP3-201ENST00000253193 Q8N377 158 aa12.02□□□□□ -0.49
LRP3-201ENST00000253193 KCNQ1DNQ9H478 68 aa12.02□□□□□ -0.49
LRP3-201ENST00000253193 DNAH10OSP0CZ25 163 aa12.01□□□□□ -0.49
LRP3-201ENST00000253193 MRPL55Q7Z7F7 128 aaKnown RBP12□□□□□ -0.49
LRP3-201ENST00000253193 Q6ZRX8 168 aa12□□□□□ -0.49
LRP3-201ENST00000253193 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
LRP3-201ENST00000253193 F8WDY8 70 aa11.97□□□□□ -0.49
LRP3-201ENST00000253193 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.49
LRP3-201ENST00000253193 DEFB116Q30KQ4 102 aa11.95□□□□□ -0.5
LRP3-201ENST00000253193 PRYO14603 147 aa11.95□□□□□ -0.5
LRP3-201ENST00000253193 A0A0G2JQZ4 141 aa11.94□□□□□ -0.5
LRP3-201ENST00000253193 A0A1W2PNN7 141 aa11.94□□□□□ -0.5
LRP3-201ENST00000253193 PRLHP81277 87 aa11.94□□□□□ -0.5
LRP3-201ENST00000253193 KLKP1Q107X0 134 aa11.94□□□□□ -0.5
LRP3-201ENST00000253193 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
LRP3-201ENST00000253193 IGLV1-50A0A075B6I6 118 aa11.94□□□□□ -0.5
LRP3-201ENST00000253193 A0A096LNI7 61 aa11.93□□□□□ -0.5
LRP3-201ENST00000253193 REG3GQ6UW15 175 aa11.93□□□□□ -0.5
LRP3-201ENST00000253193 BCE1O60756 84 aa11.93□□□□□ -0.5
LRP3-201ENST00000253193 ERC2-IT1O76042 136 aa11.93□□□□□ -0.5
LRP3-201ENST00000253193 Q9BRP9 147 aa11.93□□□□□ -0.5
LRP3-201ENST00000253193 SERP1Q9Y6X1 66 aa11.93□□□□□ -0.5
LRP3-201ENST00000253193 IGKV4-1P06312 121 aa11.9□□□□□ -0.5
LRP3-201ENST00000253193 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
LRP3-201ENST00000253193 SMIM29Q86T20 159 aa11.9□□□□□ -0.5
LRP3-201ENST00000253193 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
LRP3-201ENST00000253193 FP248Q71RG6 208 aaPredicted RBP11.89□□□□□ -0.51
LRP3-201ENST00000253193 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
LRP3-201ENST00000253193 NDUFC1O43677 76 aa11.87□□□□□ -0.51
LRP3-201ENST00000253193 Q8NBF4 154 aa11.86□□□□□ -0.51
LRP3-201ENST00000253193 UBE2AP49459 152 aa11.85□□□□□ -0.51
LRP3-201ENST00000253193 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
LRP3-201ENST00000253193 WFDC13Q8IUB5 93 aa11.85□□□□□ -0.51
LRP3-201ENST00000253193 MPLKIPQ8TAP9 179 aa11.84□□□□□ -0.51
LRP3-201ENST00000253193 EPM2AB3EWF7 344 aa11.84□□□□□ -0.51
LRP3-201ENST00000253193 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
LRP3-201ENST00000253193 A0A087WSZ3 146 aa11.82□□□□□ -0.52
LRP3-201ENST00000253193 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
LRP3-201ENST00000253193 K7EIL1 84 aa11.82□□□□□ -0.52
LRP3-201ENST00000253193 FAM229BQ4G0N7 80 aa11.82□□□□□ -0.52
LRP3-201ENST00000253193 PRR4Q16378 134 aa11.81□□□□□ -0.52
LRP3-201ENST00000253193 CHTF8P0CG12 524 aa11.81□□□□□ -0.52
LRP3-201ENST00000253193 PLA2G2DQ9UNK4 145 aa11.79□□□□□ -0.52
LRP3-201ENST00000253193 K7EQZ3 153 aa11.79□□□□□ -0.52
LRP3-201ENST00000253193 SMIM26A0A096LP01 95 aa11.77□□□□□ -0.52
LRP3-201ENST00000253193 LRCOL1A6NCL2 159 aa11.77□□□□□ -0.52
LRP3-201ENST00000253193 ANK2Q01484 3957 aa11.77□□□□□ -0.52
LRP3-201ENST00000253193 PHF5AQ7RTV0 110 aaKnown RBP11.76□□□□□ -0.53
LRP3-201ENST00000253193 OCR1Q9BZK8 76 aa11.76□□□□□ -0.53
LRP3-201ENST00000253193 KRTAP7-1Q8IUC3 87 aa11.74□□□□□ -0.53
LRP3-201ENST00000253193 SPRR1AP35321 89 aa11.73□□□□□ -0.53
LRP3-201ENST00000253193 IGLV5-37A0A075B6J1 123 aa11.72□□□□□ -0.53
LRP3-201ENST00000253193 C16orf90A8MZG2 172 aa11.72□□□□□ -0.53
LRP3-201ENST00000253193 KRTAP4-16G5E9R7 235 aaPredicted RBP11.72□□□□□ -0.53
LRP3-201ENST00000253193 IGFL1Q6UW32 110 aa11.72□□□□□ -0.53
LRP3-201ENST00000253193 ATP5EP56381 51 aaPredicted RBP11.71□□□□□ -0.53
LRP3-201ENST00000253193 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
LRP3-201ENST00000253193 A0A0U1RQV1 116 aa11.7□□□□□ -0.54
LRP3-201ENST00000253193 HCG22E2RYF7 251 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms