RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ADAMTSL4-AS1Q5T5F5 129 aa7.6□□□□□ -1.19
APOBEC3A-201ENST00000249116 LITAFQ99732 161 aa7.6□□□□□ -1.19
APOBEC3A-201ENST00000249116 NCR3O14931 201 aa7.59□□□□□ -1.19
APOBEC3A-201ENST00000249116 SCGB1D1O95968 90 aa7.59□□□□□ -1.19
APOBEC3A-201ENST00000249116 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.19
APOBEC3A-201ENST00000249116 HSBP1L1C9JCN9 74 aa7.58□□□□□ -1.2
APOBEC3A-201ENST00000249116 M0R378 163 aa7.58□□□□□ -1.2
APOBEC3A-201ENST00000249116 NPC2P61916 151 aa7.58□□□□□ -1.2
APOBEC3A-201ENST00000249116 SOSTDC1Q6X4U4 206 aa7.58□□□□□ -1.2
APOBEC3A-201ENST00000249116 PCP2Q8IVA1 136 aa7.58□□□□□ -1.2
APOBEC3A-201ENST00000249116 SCGB1D4Q6XE38 83 aa7.57□□□□□ -1.2
APOBEC3A-201ENST00000249116 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
APOBEC3A-201ENST00000249116 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
APOBEC3A-201ENST00000249116 KRTAP13-1Q8IUC0 172 aa7.56□□□□□ -1.2
APOBEC3A-201ENST00000249116 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
APOBEC3A-201ENST00000249116 TMEM238C9JI98 176 aa7.55□□□□□ -1.2
APOBEC3A-201ENST00000249116 NDUFC2O95298 119 aa7.55□□□□□ -1.2
APOBEC3A-201ENST00000249116 LINC00308Q8TCZ7 52 aa7.55□□□□□ -1.2
APOBEC3A-201ENST00000249116 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 SPANXB1Q9NS25 103 aaPredicted RBP7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 SPANXCQ9NY87 97 aa7.54□□□□□ -1.2
APOBEC3A-201ENST00000249116 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
APOBEC3A-201ENST00000249116 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.2
APOBEC3A-201ENST00000249116 PRYO14603 147 aa7.52□□□□□ -1.2
APOBEC3A-201ENST00000249116 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.2
APOBEC3A-201ENST00000249116 PRLHP81277 87 aa7.52□□□□□ -1.21
APOBEC3A-201ENST00000249116 DDTP30046 118 aa7.51□□□□□ -1.21
APOBEC3A-201ENST00000249116 CTAG1AP78358 180 aa7.51□□□□□ -1.21
APOBEC3A-201ENST00000249116 RETNLBQ9BQ08 111 aa7.51□□□□□ -1.21
APOBEC3A-201ENST00000249116 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
APOBEC3A-201ENST00000249116 Q6ZVH6 145 aa7.5□□□□□ -1.21
APOBEC3A-201ENST00000249116 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 IFITM1P13164 125 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 SPRR1AP35321 89 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 COPS9Q8WXC6 57 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 PAM16Q9Y3D7 125 aa7.49□□□□□ -1.21
APOBEC3A-201ENST00000249116 COX8AP10176 69 aa7.48□□□□□ -1.21
APOBEC3A-201ENST00000249116 S100A12P80511 92 aa7.48□□□□□ -1.21
APOBEC3A-201ENST00000249116 SPATA45Q537H7 98 aa7.48□□□□□ -1.21
APOBEC3A-201ENST00000249116 VAMP8Q9BV40 100 aa7.48□□□□□ -1.21
APOBEC3A-201ENST00000249116 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
APOBEC3A-201ENST00000249116 MUC2Q02817 5179 aa7.48□□□□□ -1.21
APOBEC3A-201ENST00000249116 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
APOBEC3A-201ENST00000249116 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
APOBEC3A-201ENST00000249116 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
APOBEC3A-201ENST00000249116 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.21
APOBEC3A-201ENST00000249116 PYY3Q5JQD4 70 aa7.46□□□□□ -1.21
APOBEC3A-201ENST00000249116 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.21
APOBEC3A-201ENST00000249116 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
APOBEC3A-201ENST00000249116 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
APOBEC3A-201ENST00000249116 DLEU1O43261 78 aa7.45□□□□□ -1.22
APOBEC3A-201ENST00000249116 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
APOBEC3A-201ENST00000249116 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
APOBEC3A-201ENST00000249116 HIGD2AQ9BW72 106 aa7.45□□□□□ -1.22
APOBEC3A-201ENST00000249116 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
APOBEC3A-201ENST00000249116 C14orf144Q96I85 54 aa7.44□□□□□ -1.22
APOBEC3A-201ENST00000249116 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
APOBEC3A-201ENST00000249116 C3orf22Q8N5N4 141 aa7.44□□□□□ -1.22
APOBEC3A-201ENST00000249116 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
APOBEC3A-201ENST00000249116 B5MCH6 92 aa7.43□□□□□ -1.22
APOBEC3A-201ENST00000249116 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
APOBEC3A-201ENST00000249116 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
APOBEC3A-201ENST00000249116 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
APOBEC3A-201ENST00000249116 SLC25A34Q6PIV7 304 aa7.41□□□□□ -1.22
APOBEC3A-201ENST00000249116 Q6ZRX8 168 aa7.41□□□□□ -1.22
APOBEC3A-201ENST00000249116 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
APOBEC3A-201ENST00000249116 HIST1H4GQ99525 98 aa7.4□□□□□ -1.22
APOBEC3A-201ENST00000249116 KRTAP4-9Q9BYQ8 210 aa7.4□□□□□ -1.22
APOBEC3A-201ENST00000249116 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
APOBEC3A-201ENST00000249116 Q9BRP9 147 aa7.39□□□□□ -1.23
APOBEC3A-201ENST00000249116 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
APOBEC3A-201ENST00000249116 A4D1N5 150 aa7.38□□□□□ -1.23
APOBEC3A-201ENST00000249116 A6NDN8 102 aa7.38□□□□□ -1.23
APOBEC3A-201ENST00000249116 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
APOBEC3A-201ENST00000249116 TRAV13-2A0A0B4J235 113 aa7.37□□□□□ -1.23
APOBEC3A-201ENST00000249116 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
APOBEC3A-201ENST00000249116 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
APOBEC3A-201ENST00000249116 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
APOBEC3A-201ENST00000249116 LCE4AQ5TA78 99 aa7.35□□□□□ -1.23
APOBEC3A-201ENST00000249116 ELOF1P60002 83 aaKnown RBP7.35□□□□□ -1.23
APOBEC3A-201ENST00000249116 Q8NBF4 154 aa7.35□□□□□ -1.23
APOBEC3A-201ENST00000249116 C12orf57Q99622 126 aa7.35□□□□□ -1.23
APOBEC3A-201ENST00000249116 SPINK1P00995 79 aa7.34□□□□□ -1.23
APOBEC3A-201ENST00000249116 COX7BP24311 80 aa7.34□□□□□ -1.23
APOBEC3A-201ENST00000249116 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
APOBEC3A-201ENST00000249116 TAL2Q16559 108 aa7.33□□□□□ -1.24
APOBEC3A-201ENST00000249116 SMIM11BQ8TCY0 68 aa7.33□□□□□ -1.24
APOBEC3A-201ENST00000249116 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
APOBEC3A-201ENST00000249116 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
APOBEC3A-201ENST00000249116 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
APOBEC3A-201ENST00000249116 H3BS24 57 aa7.31□□□□□ -1.24
APOBEC3A-201ENST00000249116 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
APOBEC3A-201ENST00000249116 CEND1Q8N111 149 aa7.31□□□□□ -1.24
APOBEC3A-201ENST00000249116 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms