RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NBEAL1Q6ZS30 2694 aa14.37□□□□□ -0.11
RNF39-201ENST00000244360 TRBV7-4A0A0J9YYF1 115 aa14.37□□□□□ -0.11
RNF39-201ENST00000244360 LINC01547P58512 204 aaPredicted RBP14.37□□□□□ -0.11
RNF39-201ENST00000244360 CXCL6P80162 114 aa14.36□□□□□ -0.11
RNF39-201ENST00000244360 CYSTM1Q9H1C7 97 aa14.36□□□□□ -0.11
RNF39-201ENST00000244360 M0R2N4 97 aa14.34□□□□□ -0.11
RNF39-201ENST00000244360 MRAPQ8TCY5 172 aa14.33□□□□□ -0.12
RNF39-201ENST00000244360 DNAH1Q9P2D7 4330 aa14.33□□□□□ -0.12
RNF39-201ENST00000244360 HAMPP81172 84 aa14.32□□□□□ -0.12
RNF39-201ENST00000244360 TLX1NBP0CAT3 122 aa14.31□□□□□ -0.12
RNF39-201ENST00000244360 LINC00528Q8N1L1 170 aa14.31□□□□□ -0.12
RNF39-201ENST00000244360 TRAV7A0A075B6U4 112 aa14.27□□□□□ -0.13
RNF39-201ENST00000244360 RMI2Q96E14 147 aa14.27□□□□□ -0.13
RNF39-201ENST00000244360 CASC10Q5T4H9 136 aa14.26□□□□□ -0.13
RNF39-201ENST00000244360 PLA2G2DQ9UNK4 145 aa14.25□□□□□ -0.13
RNF39-201ENST00000244360 DPH3Q96FX2 82 aa14.25□□□□□ -0.13
RNF39-201ENST00000244360 LOC107984640A0A0U1RRK4 108 aa14.24□□□□□ -0.13
RNF39-201ENST00000244360 SERTAD4-AS1Q5TG53 156 aa14.24□□□□□ -0.13
RNF39-201ENST00000244360 KCNQ1DNQ9H478 68 aa14.23□□□□□ -0.13
RNF39-201ENST00000244360 NKAPP1Q8N9T2 125 aa14.22□□□□□ -0.13
RNF39-201ENST00000244360 C7orf33Q8WU49 177 aa14.21□□□□□ -0.13
RNF39-201ENST00000244360 IGLV5-37A0A075B6J1 123 aa14.2□□□□□ -0.14
RNF39-201ENST00000244360 MGAM2Q2M2H8 2515 aa14.2□□□□□ -0.14
RNF39-201ENST00000244360 C20orf197Q8N268 126 aa14.19□□□□□ -0.14
RNF39-201ENST00000244360 FAM19A5Q7Z5A7 132 aaPredicted RBP14.17□□□□□ -0.14
RNF39-201ENST00000244360 KLKP1Q107X0 134 aa14.13□□□□□ -0.15
RNF39-201ENST00000244360 DNAH9Q9NYC9 4486 aa14.12□□□□□ -0.15
RNF39-201ENST00000244360 KRTAP7-1Q8IUC3 87 aa14.11□□□□□ -0.15
RNF39-201ENST00000244360 FAM168BA1KXE4 195 aa14.11□□□□□ -0.15
RNF39-201ENST00000244360 DHRS4-AS1Q9P1J3 65 aa14.11□□□□□ -0.15
RNF39-201ENST00000244360 PRYO14603 147 aa14.1□□□□□ -0.15
RNF39-201ENST00000244360 IGLV1-50A0A075B6I6 118 aa14.1□□□□□ -0.15
RNF39-201ENST00000244360 KRTAP4-16G5E9R7 235 aaPredicted RBP14.1□□□□□ -0.15
RNF39-201ENST00000244360 SCXQ7RTU7 201 aa14.1□□□□□ -0.15
RNF39-201ENST00000244360 FAM236DA0A1B0GTK5 79 aa14.09□□□□□ -0.15
RNF39-201ENST00000244360 FAM236CP0DP71 79 aa14.09□□□□□ -0.15
RNF39-201ENST00000244360 SPRR1AP35321 89 aa14.09□□□□□ -0.15
RNF39-201ENST00000244360 STAB2Q8WWQ8 2551 aa14.09□□□□□ -0.15
RNF39-201ENST00000244360 KRTAP1-5Q9BYS1 174 aa14.09□□□□□ -0.15
RNF39-201ENST00000244360 A0A1B0GW54 56 aa14.07□□□□□ -0.16
RNF39-201ENST00000244360 NREPQ16612 68 aa14.07□□□□□ -0.16
RNF39-201ENST00000244360 IGLV5-48A0A075B6I7 105 aa14.07□□□□□ -0.16
RNF39-201ENST00000244360 H7BZZ5 65 aa14.07□□□□□ -0.16
RNF39-201ENST00000244360 Q6ZRX8 168 aa14.06□□□□□ -0.16
RNF39-201ENST00000244360 DYNC2H1Q8NCM8 4307 aaKnown RBP14.06□□□□□ -0.16
RNF39-201ENST00000244360 Q8N377 158 aa14.06□□□□□ -0.16
RNF39-201ENST00000244360 RPL37AP8A6NKH3 93 aa14.05□□□□□ -0.16
RNF39-201ENST00000244360 APLNQ9ULZ1 77 aa14.05□□□□□ -0.16
RNF39-201ENST00000244360 NDUFC1O43677 76 aa14.03□□□□□ -0.16
RNF39-201ENST00000244360 OXTP01178 125 aa14.03□□□□□ -0.16
RNF39-201ENST00000244360 COL7A1Q02388 2944 aa14.03□□□□□ -0.16
RNF39-201ENST00000244360 MRPL55Q7Z7F7 128 aaKnown RBP14.03□□□□□ -0.16
RNF39-201ENST00000244360 B9D2Q9BPU9 175 aa14.03□□□□□ -0.16
RNF39-201ENST00000244360 DEFB105AQ8NG35 78 aa14.02□□□□□ -0.17
RNF39-201ENST00000244360 MDFIQ99750 246 aa14.02□□□□□ -0.17
RNF39-201ENST00000244360 Q9BRP9 147 aa14.02□□□□□ -0.17
RNF39-201ENST00000244360 BPY2O14599 106 aa14.01□□□□□ -0.17
RNF39-201ENST00000244360 ERC2-IT1O76042 136 aa14.01□□□□□ -0.17
RNF39-201ENST00000244360 IGKV4-1P06312 121 aa14.01□□□□□ -0.17
RNF39-201ENST00000244360 CNBPP62633 177 aaKnown RBP14□□□□□ -0.17
RNF39-201ENST00000244360 ETDCA0A1B0GVM5 59 aa14□□□□□ -0.17
RNF39-201ENST00000244360 FUSP35637 526 aaKnown RBP eCLIP14□□□□□ -0.17
RNF39-201ENST00000244360 UBE2DNLQ8IWF7 75 aa13.98□□□□□ -0.17
RNF39-201ENST00000244360 SERP1Q9Y6X1 66 aa13.98□□□□□ -0.17
RNF39-201ENST00000244360 SNURFQ9Y675 71 aa13.97□□□□□ -0.17
RNF39-201ENST00000244360 C3orf84H3BNL1 204 aa13.96□□□□□ -0.17
RNF39-201ENST00000244360 TNP2Q05952 138 aa13.95□□□□□ -0.18
RNF39-201ENST00000244360 DNAH10Q8IVF4 4471 aa13.94□□□□□ -0.18
RNF39-201ENST00000244360 C16orf90A8MZG2 172 aa13.94□□□□□ -0.18
RNF39-201ENST00000244360 EPM2AB3EWF7 344 aa13.94□□□□□ -0.18
RNF39-201ENST00000244360 C5orf47Q569G3 176 aa13.94□□□□□ -0.18
RNF39-201ENST00000244360 ATP5EP56381 51 aaPredicted RBP13.94□□□□□ -0.18
RNF39-201ENST00000244360 F8WEM9 126 aa13.93□□□□□ -0.18
RNF39-201ENST00000244360 PSCAO43653 123 aa13.93□□□□□ -0.18
RNF39-201ENST00000244360 A0A096LNI7 61 aa13.92□□□□□ -0.18
RNF39-201ENST00000244360 Q8N9L7 120 aa13.92□□□□□ -0.18
RNF39-201ENST00000244360 C1orf137Q5JT78 98 aa13.91□□□□□ -0.18
RNF39-201ENST00000244360 LYSTQ99698 3801 aa13.91□□□□□ -0.18
RNF39-201ENST00000244360 REG3GQ6UW15 175 aa13.91□□□□□ -0.18
RNF39-201ENST00000244360 TMEM254Q8TBM7 123 aa13.91□□□□□ -0.18
RNF39-201ENST00000244360 C14orf177Q52M58 125 aa13.9□□□□□ -0.18
RNF39-201ENST00000244360 Q8NBF4 154 aa13.9□□□□□ -0.18
RNF39-201ENST00000244360 A0A1W2PNM2 257 aa13.89□□□□□ -0.19
RNF39-201ENST00000244360 OCR1Q9BZK8 76 aa13.89□□□□□ -0.19
RNF39-201ENST00000244360 ST20-AS1Q8NBB2 130 aa13.88□□□□□ -0.19
RNF39-201ENST00000244360 Q5XG85 94 aa13.88□□□□□ -0.19
RNF39-201ENST00000244360 SPRR4Q96PI1 79 aa13.87□□□□□ -0.19
RNF39-201ENST00000244360 A0A1W2PNN7 141 aa13.86□□□□□ -0.19
RNF39-201ENST00000244360 IGKV2-24A0A0C4DH68 120 aa13.84□□□□□ -0.19
RNF39-201ENST00000244360 NUPR2A6NF83 97 aa13.84□□□□□ -0.19
RNF39-201ENST00000244360 UBE2BP63146 152 aa13.84□□□□□ -0.19
RNF39-201ENST00000244360 PLECQ15149 4684 aaKnown RBP13.82□□□□□ -0.2
RNF39-201ENST00000244360 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.81□□□□□ -0.2
RNF39-201ENST00000244360 A0A0U1RQV1 116 aa13.81□□□□□ -0.2
RNF39-201ENST00000244360 NBDYA0A0U1RRE5 68 aa13.81□□□□□ -0.2
RNF39-201ENST00000244360 LRCOL1A6NCL2 159 aa13.81□□□□□ -0.2
RNF39-201ENST00000244360 CSMD3Q7Z407 3707 aa13.81□□□□□ -0.2
RNF39-201ENST00000244360 C4orf26Q17RF5 130 aa13.79□□□□□ -0.2
RNF39-201ENST00000244360 Q6ZRN7 208 aaPredicted RBP13.77□□□□□ -0.21
RNF39-201ENST00000244360 SMIM29Q86T20 159 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms